RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 CT45A6P0DMU7 189 aa5.05□□□□□ -1.6
PRKDC-211ENST00000546304 CT45A5P0DMU8 189 aa5.05□□□□□ -1.6
PRKDC-211ENST00000546304 CT45A7P0DMV0 189 aa5.05□□□□□ -1.6
PRKDC-211ENST00000546304 PGAM2P15259 253 aa5.05□□□□□ -1.6
PRKDC-211ENST00000546304 TMEM11P17152 192 aa5.05□□□□□ -1.6
PRKDC-211ENST00000546304 CD1BP29016 333 aa5.05□□□□□ -1.6
PRKDC-211ENST00000546304 CD40LGP29965 261 aa5.05□□□□□ -1.6
PRKDC-211ENST00000546304 DUTP33316 252 aaKnown RBP5.05□□□□□ -1.6
PRKDC-211ENST00000546304 THBS3P49746 956 aa5.05□□□□□ -1.6
PRKDC-211ENST00000546304 RPL15P61313 204 aaKnown RBP5.05□□□□□ -1.6
PRKDC-211ENST00000546304 EIF4EBP1Q13541 118 aaPredicted RBP5.05□□□□□ -1.6
PRKDC-211ENST00000546304 ZNF846Q147U1 533 aa5.05□□□□□ -1.6
PRKDC-211ENST00000546304 RTL8BQ17RB0 113 aa5.05□□□□□ -1.6
PRKDC-211ENST00000546304 AADACL3Q5VUY0 350 aa5.05□□□□□ -1.6
PRKDC-211ENST00000546304 DHRS11Q6UWP2 260 aa5.05□□□□□ -1.6
PRKDC-211ENST00000546304 CCBE1Q6UXH8 406 aaPredicted RBP5.05□□□□□ -1.6
PRKDC-211ENST00000546304 IDO2Q6ZQW0 420 aa5.05□□□□□ -1.6
PRKDC-211ENST00000546304 ZNF818PQ6ZRF7 136 aa5.05□□□□□ -1.6
PRKDC-211ENST00000546304 C16orf82Q7Z2V1 217 aa5.05□□□□□ -1.6
PRKDC-211ENST00000546304 PDPNQ86YL7 162 aa5.05□□□□□ -1.6
PRKDC-211ENST00000546304 SLC38A6Q8IZM9 456 aa5.05□□□□□ -1.6
PRKDC-211ENST00000546304 ZNF383Q8NA42 475 aa5.05□□□□□ -1.6
PRKDC-211ENST00000546304 OR51S1Q8NGJ8 323 aa5.05□□□□□ -1.6
PRKDC-211ENST00000546304 OR2T10Q8NGZ9 312 aa5.05□□□□□ -1.6
PRKDC-211ENST00000546304 ZFAND2BQ8WV99 257 aa5.05□□□□□ -1.6
PRKDC-211ENST00000546304 TCTEX1D2Q8WW35 142 aa5.05□□□□□ -1.6
PRKDC-211ENST00000546304 ADTRPQ96IZ2 230 aa5.05□□□□□ -1.6
PRKDC-211ENST00000546304 AKR1E2Q96JD6 320 aa5.05□□□□□ -1.6
PRKDC-211ENST00000546304 HSD17B10Q99714 261 aaKnown RBP5.05□□□□□ -1.6
PRKDC-211ENST00000546304 SLC25A33Q9BSK2 321 aa5.05□□□□□ -1.6
PRKDC-211ENST00000546304 CCL28Q9NRJ3 127 aa5.05□□□□□ -1.6
PRKDC-211ENST00000546304 SLC2A9Q9NRM0 540 aa5.05□□□□□ -1.6
PRKDC-211ENST00000546304 SLC35D1Q9NTN3 355 aa5.05□□□□□ -1.6
PRKDC-211ENST00000546304 LIN7CQ9NUP9 197 aaKnown RBP5.05□□□□□ -1.6
PRKDC-211ENST00000546304 GAB2Q9UQC2 676 aa5.05□□□□□ -1.6
PRKDC-211ENST00000546304 MOB4Q9Y3A3 225 aa5.05□□□□□ -1.6
PRKDC-211ENST00000546304 WASHC3Q9Y3C0 194 aa5.05□□□□□ -1.6
PRKDC-211ENST00000546304 LINC00473A8K010 186 aa5.04□□□□□ -1.6
PRKDC-211ENST00000546304 RNF212BA8MTL3 300 aa5.04□□□□□ -1.6
PRKDC-211ENST00000546304 M0QZK8 103 aa5.04□□□□□ -1.6
PRKDC-211ENST00000546304 GPR31O00270 319 aa5.04□□□□□ -1.6
PRKDC-211ENST00000546304 MOSP00540 346 aa5.04□□□□□ -1.6
PRKDC-211ENST00000546304 IGKV1-16P04430 117 aa5.04□□□□□ -1.6
PRKDC-211ENST00000546304 S100GP29377 79 aa5.04□□□□□ -1.6
PRKDC-211ENST00000546304 GNRHRP30968 328 aa5.04□□□□□ -1.6
PRKDC-211ENST00000546304 MC5RP33032 325 aa5.04□□□□□ -1.6
PRKDC-211ENST00000546304 UCP3P55916 312 aa5.04□□□□□ -1.6
PRKDC-211ENST00000546304 LINC00205P59089 165 aa5.04□□□□□ -1.6
PRKDC-211ENST00000546304 CD69Q07108 199 aa5.04□□□□□ -1.6
PRKDC-211ENST00000546304 CATR1Q13166 79 aa5.04□□□□□ -1.6
PRKDC-211ENST00000546304 CBX3Q13185 183 aa5.04□□□□□ -1.6
PRKDC-211ENST00000546304 EBI3Q14213 229 aa5.04□□□□□ -1.6
PRKDC-211ENST00000546304 HNF4GQ14541 408 aa5.04□□□□□ -1.6
PRKDC-211ENST00000546304 SURF2Q15527 256 aaPredicted RBP5.04□□□□□ -1.6
PRKDC-211ENST00000546304 MMDQ15546 238 aa5.04□□□□□ -1.6
PRKDC-211ENST00000546304 PHLDA2Q53GA4 152 aa5.04□□□□□ -1.6
PRKDC-211ENST00000546304 OR2B11Q5JQS5 317 aa5.04□□□□□ -1.6
PRKDC-211ENST00000546304 IGFL4Q6B9Z1 124 aa5.04□□□□□ -1.6
PRKDC-211ENST00000546304 C16orf87Q6PH81 154 aa5.04□□□□□ -1.6
PRKDC-211ENST00000546304 ZNF66Q6ZN08 573 aa5.04□□□□□ -1.6
PRKDC-211ENST00000546304 Q6ZRM9 215 aa5.04□□□□□ -1.6
PRKDC-211ENST00000546304 CMTM1Q8IZ96 169 aa5.04□□□□□ -1.6
PRKDC-211ENST00000546304 Q8N6K4 173 aa5.04□□□□□ -1.6
PRKDC-211ENST00000546304 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.04□□□□□ -1.6
PRKDC-211ENST00000546304 ZBTB34Q8NCN2 500 aa5.04□□□□□ -1.6
PRKDC-211ENST00000546304 OR8H1Q8NGG4 311 aa5.04□□□□□ -1.6
PRKDC-211ENST00000546304 OR13C8Q8NGS7 320 aa5.04□□□□□ -1.6
PRKDC-211ENST00000546304 OR51H1Q8NH63 302 aa5.04□□□□□ -1.6
PRKDC-211ENST00000546304 OR4S2Q8NH73 311 aa5.04□□□□□ -1.6
PRKDC-211ENST00000546304 TERB2Q8NHR7 220 aa5.04□□□□□ -1.6
PRKDC-211ENST00000546304 DDB2Q92466 427 aa5.04□□□□□ -1.6
PRKDC-211ENST00000546304 MRGPRFQ96AM1 343 aa5.04□□□□□ -1.6
PRKDC-211ENST00000546304 RBMXL1Q96E39 390 aaKnown RBP5.04□□□□□ -1.6
PRKDC-211ENST00000546304 ZNF486Q96H40 463 aaPredicted RBP5.04□□□□□ -1.6
PRKDC-211ENST00000546304 HARBI1Q96MB7 349 aa5.04□□□□□ -1.6
PRKDC-211ENST00000546304 RBM14Q96PK6 669 aaKnown RBP5.04□□□□□ -1.6
PRKDC-211ENST00000546304 NPFFR1Q9GZQ6 430 aa5.04□□□□□ -1.6
PRKDC-211ENST00000546304 HRASLSQ9HDD0 168 aa5.04□□□□□ -1.6
PRKDC-211ENST00000546304 SCP2D1Q9UJQ7 156 aa5.04□□□□□ -1.6
PRKDC-211ENST00000546304 PRELID3BQ9Y3B1 194 aa5.04□□□□□ -1.6
PRKDC-211ENST00000546304 LINC00854A0A1B0GVQ3 168 aa5.03□□□□□ -1.6
PRKDC-211ENST00000546304 NAP1L6A6NFF2 107 aa5.03□□□□□ -1.6
PRKDC-211ENST00000546304 PRSS47A8MTI9 375 aa5.03□□□□□ -1.6
PRKDC-211ENST00000546304 J3KRW8 73 aa5.03□□□□□ -1.6
PRKDC-211ENST00000546304 NBR2O15453 112 aa5.03□□□□□ -1.6
PRKDC-211ENST00000546304 RBFOX2O43251 390 aaKnown RBP eCLIP5.03□□□□□ -1.6
PRKDC-211ENST00000546304 FGF16O43320 207 aa5.03□□□□□ -1.6
PRKDC-211ENST00000546304 FCGR3BO75015 233 aa5.03□□□□□ -1.6
PRKDC-211ENST00000546304 UPK1BO75841 260 aa5.03□□□□□ -1.6
PRKDC-211ENST00000546304 SPDEFO95238 335 aa5.03□□□□□ -1.6
PRKDC-211ENST00000546304 LY86O95711 162 aa5.03□□□□□ -1.6
PRKDC-211ENST00000546304 CRYZL1O95825 349 aa5.03□□□□□ -1.6
PRKDC-211ENST00000546304 RRASP10301 218 aa5.03□□□□□ -1.6
PRKDC-211ENST00000546304 BTCP35070 178 aa5.03□□□□□ -1.6
PRKDC-211ENST00000546304 KIR2DS2P43631 304 aa5.03□□□□□ -1.6
PRKDC-211ENST00000546304 RAG2P55895 527 aa5.03□□□□□ -1.6
PRKDC-211ENST00000546304 PIGPP57054 158 aa5.03□□□□□ -1.6
PRKDC-211ENST00000546304 RND3P61587 244 aa5.03□□□□□ -1.6
PRKDC-211ENST00000546304 RPL30P62888 115 aaKnown RBP5.03□□□□□ -1.6
PRKDC-211ENST00000546304 RBMS2Q15434 407 aaKnown RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms