RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 CELA2AP08217 269 aa6.65□□□□□ -1.34
UBR1-202ENST00000546274 HERV-K104P63124 156 aa6.65□□□□□ -1.34
UBR1-202ENST00000546274 Q6ZPA2 131 aa6.65□□□□□ -1.34
UBR1-202ENST00000546274 ODF3L1Q8IXM7 274 aa6.65□□□□□ -1.34
UBR1-202ENST00000546274 MSI2Q96DH6 328 aaKnown RBP6.65□□□□□ -1.34
UBR1-202ENST00000546274 GMPPAQ96IJ6 420 aaPredicted RBP6.65□□□□□ -1.34
UBR1-202ENST00000546274 GEMIN7Q9H840 131 aaKnown RBP6.65□□□□□ -1.34
UBR1-202ENST00000546274 ANXA10Q9UJ72 324 aa6.65□□□□□ -1.34
UBR1-202ENST00000546274 UBE2J1Q9Y385 318 aaPredicted RBP6.65□□□□□ -1.34
UBR1-202ENST00000546274 TNRC6BQ9UPQ9 1833 aaKnown RBP6.65□□□□□ -1.34
UBR1-202ENST00000546274 SLC17A3O00476 420 aa6.65□□□□□ -1.35
UBR1-202ENST00000546274 LAMTOR5O43504 91 aa6.65□□□□□ -1.35
UBR1-202ENST00000546274 PMP22Q01453 160 aa6.65□□□□□ -1.35
UBR1-202ENST00000546274 BRICD5Q6PL45 260 aa6.65□□□□□ -1.35
UBR1-202ENST00000546274 MRPL21Q7Z2W9 205 aaKnown RBP6.65□□□□□ -1.35
UBR1-202ENST00000546274 ZNF695Q8IW36 515 aa6.65□□□□□ -1.35
UBR1-202ENST00000546274 GJC3Q8NFK1 279 aa6.65□□□□□ -1.35
UBR1-202ENST00000546274 NAT6Q93015 286 aa6.65□□□□□ -1.35
UBR1-202ENST00000546274 SIGLEC12Q96PQ1 595 aa6.65□□□□□ -1.35
UBR1-202ENST00000546274 UCN2Q96RP3 112 aa6.65□□□□□ -1.35
UBR1-202ENST00000546274 PROK2Q9HC23 129 aa6.65□□□□□ -1.35
UBR1-202ENST00000546274 TAAR3PQ9P1P4 343 aa6.65□□□□□ -1.35
UBR1-202ENST00000546274 A0A087X0K7 114 aa6.65□□□□□ -1.35
UBR1-202ENST00000546274 CNIH1O95406 144 aa6.65□□□□□ -1.35
UBR1-202ENST00000546274 ZNF16P17020 682 aaPredicted RBP6.65□□□□□ -1.35
UBR1-202ENST00000546274 CRYGSP22914 178 aa6.65□□□□□ -1.35
UBR1-202ENST00000546274 YPEL3P61236 119 aaPredicted RBP6.65□□□□□ -1.35
UBR1-202ENST00000546274 SLC35B1P78383 322 aa6.65□□□□□ -1.35
UBR1-202ENST00000546274 MEF2CQ06413 473 aaPredicted RBP6.65□□□□□ -1.35
UBR1-202ENST00000546274 C1orf210Q8IVY1 113 aa6.65□□□□□ -1.35
UBR1-202ENST00000546274 ZNF114Q8NC26 417 aa6.65□□□□□ -1.35
UBR1-202ENST00000546274 ZNF439Q8NDP4 499 aa6.65□□□□□ -1.35
UBR1-202ENST00000546274 MBD3L1Q8WWY6 194 aa6.65□□□□□ -1.35
UBR1-202ENST00000546274 HINT2Q9BX68 163 aa6.65□□□□□ -1.35
UBR1-202ENST00000546274 NAT8BQ9UHF3 227 aa6.65□□□□□ -1.35
UBR1-202ENST00000546274 IGHV5-10-1A0A0J9YXX1 117 aa6.64□□□□□ -1.35
UBR1-202ENST00000546274 MDFIC2A0A1B0GVS7 189 aa6.64□□□□□ -1.35
UBR1-202ENST00000546274 ANGPTL7O43827 346 aa6.64□□□□□ -1.35
UBR1-202ENST00000546274 ZNF324O75467 553 aaPredicted RBP6.64□□□□□ -1.35
UBR1-202ENST00000546274 DEFA4P12838 97 aa6.64□□□□□ -1.35
UBR1-202ENST00000546274 ECI1P42126 302 aa6.64□□□□□ -1.35
UBR1-202ENST00000546274 MRPL14Q6P1L8 145 aaKnown RBP6.64□□□□□ -1.35
UBR1-202ENST00000546274 GUSBP11Q6P575 273 aa6.64□□□□□ -1.35
UBR1-202ENST00000546274 TCF24Q7RTU0 167 aa6.64□□□□□ -1.35
UBR1-202ENST00000546274 BATF2Q8N1L9 274 aa6.64□□□□□ -1.35
UBR1-202ENST00000546274 PERPQ96FX8 193 aa6.64□□□□□ -1.35
UBR1-202ENST00000546274 PLEKHJ1Q9NW61 149 aa6.64□□□□□ -1.35
UBR1-202ENST00000546274 CRIM1Q9NZV1 1036 aa6.64□□□□□ -1.35
UBR1-202ENST00000546274 TSSC4Q9Y5U2 329 aaPredicted RBP6.64□□□□□ -1.35
UBR1-202ENST00000546274 SDK1Q7Z5N4 2213 aa6.64□□□□□ -1.35
UBR1-202ENST00000546274 LRP5LA4QPB2 252 aa6.64□□□□□ -1.35
UBR1-202ENST00000546274 TMEM250H0YL14 139 aa6.64□□□□□ -1.35
UBR1-202ENST00000546274 M0R135 149 aa6.64□□□□□ -1.35
UBR1-202ENST00000546274 CDIPTO14735 213 aa6.64□□□□□ -1.35
UBR1-202ENST00000546274 SPRY1O43609 319 aaPredicted RBP6.64□□□□□ -1.35
UBR1-202ENST00000546274 SNAI2O43623 268 aa6.64□□□□□ -1.35
UBR1-202ENST00000546274 CLEC3BP05452 202 aa6.64□□□□□ -1.35
UBR1-202ENST00000546274 PRSS12P56730 875 aa6.64□□□□□ -1.35
UBR1-202ENST00000546274 DAZAP2Q15038 168 aaPredicted RBP6.64□□□□□ -1.35
UBR1-202ENST00000546274 PCOLCEQ15113 449 aa6.64□□□□□ -1.35
UBR1-202ENST00000546274 BHLHA15Q7RTS1 189 aaPredicted RBP6.64□□□□□ -1.35
UBR1-202ENST00000546274 C10orf35Q96D05 121 aa6.64□□□□□ -1.35
UBR1-202ENST00000546274 ZNF799Q96GE5 643 aa6.64□□□□□ -1.35
UBR1-202ENST00000546274 GP6Q9HCN6 339 aa6.64□□□□□ -1.35
UBR1-202ENST00000546274 TEX48A0A1B0GUV7 120 aa6.63□□□□□ -1.35
UBR1-202ENST00000546274 C17orf112F2Z3M2 114 aa6.63□□□□□ -1.35
UBR1-202ENST00000546274 H3BUT2 72 aa6.63□□□□□ -1.35
UBR1-202ENST00000546274 ZIC3O60481 467 aa6.63□□□□□ -1.35
UBR1-202ENST00000546274 NDUFB4O95168 129 aa6.63□□□□□ -1.35
UBR1-202ENST00000546274 SCGB1A1P11684 91 aa6.63□□□□□ -1.35
UBR1-202ENST00000546274 GATA3P23771 443 aa6.63□□□□□ -1.35
UBR1-202ENST00000546274 NTF4P34130 210 aa6.63□□□□□ -1.35
UBR1-202ENST00000546274 HSD52Q0P140 79 aa6.63□□□□□ -1.35
UBR1-202ENST00000546274 FOXL1Q12952 345 aa6.63□□□□□ -1.35
UBR1-202ENST00000546274 PMCHL1Q16048 86 aa6.63□□□□□ -1.35
UBR1-202ENST00000546274 CT55Q8WUE5 264 aa6.63□□□□□ -1.35
UBR1-202ENST00000546274 CACNG8Q8WXS5 425 aa6.63□□□□□ -1.35
UBR1-202ENST00000546274 NEIL1Q96FI4 390 aaPredicted RBP6.63□□□□□ -1.35
UBR1-202ENST00000546274 KCNS1Q96KK3 526 aa6.63□□□□□ -1.35
UBR1-202ENST00000546274 CACNA1EQ15878 2313 aa6.63□□□□□ -1.35
UBR1-202ENST00000546274 TTC28Q96AY4 2481 aa6.63□□□□□ -1.35
UBR1-202ENST00000546274 IGKV1-12A0A0C4DH73 117 aa6.63□□□□□ -1.35
UBR1-202ENST00000546274 DHHO43323 396 aa6.63□□□□□ -1.35
UBR1-202ENST00000546274 IGKV1D-12P01611 117 aa6.63□□□□□ -1.35
UBR1-202ENST00000546274 APOA2P02652 100 aa6.63□□□□□ -1.35
UBR1-202ENST00000546274 NPPCP23582 126 aa6.63□□□□□ -1.35
UBR1-202ENST00000546274 NPY1RP25929 384 aa6.63□□□□□ -1.35
UBR1-202ENST00000546274 FKBP2P26885 142 aaKnown RBP6.63□□□□□ -1.35
UBR1-202ENST00000546274 GDF1P27539 372 aa6.63□□□□□ -1.35
UBR1-202ENST00000546274 CXCL12P48061 93 aa6.63□□□□□ -1.35
UBR1-202ENST00000546274 CCL7P80098 99 aa6.63□□□□□ -1.35
UBR1-202ENST00000546274 C12orf54Q6X4T0 127 aa6.63□□□□□ -1.35
UBR1-202ENST00000546274 ASCL4Q6XD76 172 aa6.63□□□□□ -1.35
UBR1-202ENST00000546274 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.63□□□□□ -1.35
UBR1-202ENST00000546274 RPP25LQ8N5L8 163 aaKnown RBP6.63□□□□□ -1.35
UBR1-202ENST00000546274 LRTM2Q8N967 370 aa6.63□□□□□ -1.35
UBR1-202ENST00000546274 PRSS33Q8NF86 280 aa6.63□□□□□ -1.35
UBR1-202ENST00000546274 BLNKQ8WV28 456 aa6.63□□□□□ -1.35
UBR1-202ENST00000546274 DEFB126Q9BYW3 111 aa6.63□□□□□ -1.35
UBR1-202ENST00000546274 PI4KAP42356 2102 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms