RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, human

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-223	ENST00000545215	MEF2C	Q06413	473 aa	Predicted RBP	5.26	□□□□□ -1.57
LDHA-223	ENST00000545215	UNC119	Q13432	240 aa		5.26	□□□□□ -1.57
LDHA-223	ENST00000545215	PET117	Q6UWS5	81 aa		5.26	□□□□□ -1.57
LDHA-223	ENST00000545215	ZNF841	Q6ZN19	808 aa		5.26	□□□□□ -1.57
LDHA-223	ENST00000545215	SAMD12	Q8N8I0	201 aa		5.26	□□□□□ -1.57
LDHA-223	ENST00000545215	TMEM104	Q8NE00	496 aa		5.26	□□□□□ -1.57
LDHA-223	ENST00000545215	OR10K1	Q8NGX5	313 aa		5.26	□□□□□ -1.57
LDHA-223	ENST00000545215	OR5R1	Q8NH85	324 aa		5.26	□□□□□ -1.57
LDHA-223	ENST00000545215	MCFD2	Q8NI22	146 aa		5.26	□□□□□ -1.57
LDHA-223	ENST00000545215	SETD6	Q8TBK2	473 aa		5.26	□□□□□ -1.57
LDHA-223	ENST00000545215	LGALS14	Q8TCE9	139 aa		5.26	□□□□□ -1.57
LDHA-223	ENST00000545215	RAB3C	Q96E17	227 aa		5.26	□□□□□ -1.57
LDHA-223	ENST00000545215	ZNF488	Q96MN9	340 aa		5.26	□□□□□ -1.57
LDHA-223	ENST00000545215	GAFA1	Q96PS6	74 aa		5.26	□□□□□ -1.57
LDHA-223	ENST00000545215	BARHL1	Q9BZE3	327 aa		5.26	□□□□□ -1.57
LDHA-223	ENST00000545215	SLIRP	Q9GZT3	109 aa	Known RBP	5.26	□□□□□ -1.57
LDHA-223	ENST00000545215	NXF2	Q9GZY0	626 aa	Known RBP	5.26	□□□□□ -1.57
LDHA-223	ENST00000545215	ALX4	Q9H161	411 aa	Predicted RBP	5.26	□□□□□ -1.57
LDHA-223	ENST00000545215	LPAR5	Q9H1C0	372 aa		5.26	□□□□□ -1.57
LDHA-223	ENST00000545215	KCNK15	Q9H427	330 aa		5.26	□□□□□ -1.57
LDHA-223	ENST00000545215	MAP6D1	Q9H9H5	199 aa		5.26	□□□□□ -1.57
LDHA-223	ENST00000545215	CHMP1A	Q9HD42	196 aa	Predicted RBP	5.26	□□□□□ -1.57
LDHA-223	ENST00000545215	PLEKHJ1	Q9NW61	149 aa		5.26	□□□□□ -1.57
LDHA-223	ENST00000545215	CTSZ	Q9UBR2	303 aa		5.26	□□□□□ -1.57
LDHA-223	ENST00000545215	OR14J1	Q9UGF5	321 aa		5.26	□□□□□ -1.57
LDHA-223	ENST00000545215	MGAT4A	Q9UM21	535 aa		5.26	□□□□□ -1.57
LDHA-223	ENST00000545215	KCNK7	Q9Y2U2	307 aa		5.26	□□□□□ -1.57
LDHA-223	ENST00000545215	KIAA2026	Q5HYC2	2103 aa		5.26	□□□□□ -1.57
LDHA-223	ENST00000545215		A0A1W2PRV1	198 aa		5.25	□□□□□ -1.57
LDHA-223	ENST00000545215	SMIM30	A4D0T7	59 aa		5.25	□□□□□ -1.57
LDHA-223	ENST00000545215	ZNF729	A6NN14	1252 aa	Predicted RBP	5.25	□□□□□ -1.57
LDHA-223	ENST00000545215		F8VVB4	439 aa		5.25	□□□□□ -1.57
LDHA-223	ENST00000545215		F8VWA3	439 aa		5.25	□□□□□ -1.57
LDHA-223	ENST00000545215		H7C2Y5	167 aa		5.25	□□□□□ -1.57
LDHA-223	ENST00000545215	ZNF737	O75373	536 aa		5.25	□□□□□ -1.57
LDHA-223	ENST00000545215	FBP1	P09467	338 aa		5.25	□□□□□ -1.57
LDHA-223	ENST00000545215	GABRR1	P24046	479 aa		5.25	□□□□□ -1.57
LDHA-223	ENST00000545215	PTBP1	P26599	531 aa	Known RBP eCLIP	5.25	□□□□□ -1.57	2e-6	■□□□□ 10.7
LDHA-223	ENST00000545215	BLVRB	P30043	206 aa	Predicted RBP	5.25	□□□□□ -1.57
LDHA-223	ENST00000545215	MNDA	P41218	407 aa		5.25	□□□□□ -1.57
LDHA-223	ENST00000545215	RPL35	P42766	123 aa	Known RBP	5.25	□□□□□ -1.57
LDHA-223	ENST00000545215	GMFB	P60983	142 aa		5.25	□□□□□ -1.57
LDHA-223	ENST00000545215	MRPS10	P82664	201 aa	Known RBP	5.25	□□□□□ -1.57
LDHA-223	ENST00000545215	TMEM30B	Q3MIR4	351 aa		5.25	□□□□□ -1.57
LDHA-223	ENST00000545215	PIGY	Q3MUY2	71 aa		5.25	□□□□□ -1.57
LDHA-223	ENST00000545215	PAN3	Q58A45	887 aa	Known RBP	5.25	□□□□□ -1.57
LDHA-223	ENST00000545215		Q6P435	159 aa		5.25	□□□□□ -1.57
LDHA-223	ENST00000545215	METAP1D	Q6UB28	335 aa	Predicted RBP	5.25	□□□□□ -1.57
LDHA-223	ENST00000545215	ZNF66	Q6ZN08	573 aa		5.25	□□□□□ -1.57
LDHA-223	ENST00000545215	GDPD3	Q7L5L3	318 aa		5.25	□□□□□ -1.57
LDHA-223	ENST00000545215	MOB1B	Q7L9L4	216 aa		5.25	□□□□□ -1.57
LDHA-223	ENST00000545215	SSX9	Q7RTT3	188 aa		5.25	□□□□□ -1.57
LDHA-223	ENST00000545215	TCTE3	Q8IZS6	198 aa		5.25	□□□□□ -1.57
LDHA-223	ENST00000545215	CD177	Q8N6Q3	437 aa		5.25	□□□□□ -1.57
LDHA-223	ENST00000545215	TMEM185A	Q8NFB2	350 aa		5.25	□□□□□ -1.57
LDHA-223	ENST00000545215	OR10R2	Q8NGX6	335 aa		5.25	□□□□□ -1.57
LDHA-223	ENST00000545215	CCL13	Q99616	98 aa		5.25	□□□□□ -1.57
LDHA-223	ENST00000545215	SSX3	Q99909	188 aa		5.25	□□□□□ -1.57
LDHA-223	ENST00000545215	DCTN5	Q9BTE1	182 aa		5.25	□□□□□ -1.57
LDHA-223	ENST00000545215	ATG5	Q9H1Y0	275 aa		5.25	□□□□□ -1.57
LDHA-223	ENST00000545215	BANF2	Q9H503	90 aa		5.25	□□□□□ -1.57
LDHA-223	ENST00000545215	OR6C3	Q9NZP0	311 aa		5.25	□□□□□ -1.57
LDHA-223	ENST00000545215	COMMD3	Q9UBI1	195 aa		5.25	□□□□□ -1.57
LDHA-223	ENST00000545215	ZNF256	Q9Y2P7	627 aa	Predicted RBP	5.25	□□□□□ -1.57
LDHA-223	ENST00000545215	MAB21L2	Q9Y586	359 aa		5.25	□□□□□ -1.57
LDHA-223	ENST00000545215	TSSC4	Q9Y5U2	329 aa	Predicted RBP	5.25	□□□□□ -1.57
LDHA-223	ENST00000545215	FLG2	Q5D862	2391 aa	Predicted RBP	5.25	□□□□□ -1.57
LDHA-223	ENST00000545215	APOB	P04114	4563 aa	Known RBP	5.25	□□□□□ -1.57
LDHA-223	ENST00000545215	IGHV3OR15-7	A0A075B7D8	119 aa		5.24	□□□□□ -1.57
LDHA-223	ENST00000545215	TRBV6-6	A0A0A6YYG2	114 aa		5.24	□□□□□ -1.57
LDHA-223	ENST00000545215	TRAV24	A0A0B4J272	114 aa		5.24	□□□□□ -1.57
LDHA-223	ENST00000545215		A0A1W2PP11	408 aa		5.24	□□□□□ -1.57
LDHA-223	ENST00000545215	hADV38S2	A0JD32	116 aa		5.24	□□□□□ -1.57
LDHA-223	ENST00000545215	TMEM30CP	A0ZSE6	113 aa		5.24	□□□□□ -1.57
LDHA-223	ENST00000545215	FOXI3	A8MTJ6	420 aa	Predicted RBP	5.24	□□□□□ -1.57
LDHA-223	ENST00000545215	SIRPB1	O00241	398 aa		5.24	□□□□□ -1.57
LDHA-223	ENST00000545215	SLC33A1	O00400	549 aa	Predicted RBP	5.24	□□□□□ -1.57
LDHA-223	ENST00000545215	DVL1	O14640	695 aa		5.24	□□□□□ -1.57
LDHA-223	ENST00000545215	SLC31A2	O15432	143 aa		5.24	□□□□□ -1.57
LDHA-223	ENST00000545215	XRCC3	O43542	346 aa		5.24	□□□□□ -1.57
LDHA-223	ENST00000545215	RAB3D	O95716	219 aa		5.24	□□□□□ -1.57
LDHA-223	ENST00000545215	MB	P02144	154 aa		5.24	□□□□□ -1.57
LDHA-223	ENST00000545215	RBP4	P02753	201 aa		5.24	□□□□□ -1.57
LDHA-223	ENST00000545215	IFNA6	P05013	189 aa		5.24	□□□□□ -1.57
LDHA-223	ENST00000545215	FCER2	P06734	321 aa		5.24	□□□□□ -1.57
LDHA-223	ENST00000545215	HIST1H1D	P16402	221 aa	Known RBP	5.24	□□□□□ -1.57
LDHA-223	ENST00000545215	GZMH	P20718	246 aa		5.24	□□□□□ -1.57
LDHA-223	ENST00000545215	OR3A1	P47881	315 aa		5.24	□□□□□ -1.57
LDHA-223	ENST00000545215	ARF6	P62330	175 aa		5.24	□□□□□ -1.57
LDHA-223	ENST00000545215	ZNF45	Q02386	682 aa		5.24	□□□□□ -1.57
LDHA-223	ENST00000545215	SCN1B	Q07699	218 aa		5.24	□□□□□ -1.57
LDHA-223	ENST00000545215	GRK1	Q15835	563 aa		5.24	□□□□□ -1.57
LDHA-223	ENST00000545215	SRSF7	Q16629	238 aa	Known RBP eCLIP	5.24	□□□□□ -1.57
LDHA-223	ENST00000545215	TMEM69	Q5SWH9	247 aa		5.24	□□□□□ -1.57
LDHA-223	ENST00000545215	GGNBP1	Q5YKI7	109 aa		5.24	□□□□□ -1.57
LDHA-223	ENST00000545215	OR10K2	Q6IF99	312 aa		5.24	□□□□□ -1.57
LDHA-223	ENST00000545215	PDZD9	Q8IXQ8	264 aa		5.24	□□□□□ -1.57
LDHA-223	ENST00000545215	GAPT	Q8N292	157 aa		5.24	□□□□□ -1.57
LDHA-223	ENST00000545215		Q8N2B8	174 aa		5.24	□□□□□ -1.57
LDHA-223	ENST00000545215	SUMF2	Q8NBJ7	301 aa		5.24	□□□□□ -1.57

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