RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 ERG28Q9UKR5 140 aa7.42□□□□□ -1.22
ATXN3-216ENST00000545170 IGHV3OR15-7A0A075B7D8 119 aa7.42□□□□□ -1.22
ATXN3-216ENST00000545170 AZU1P20160 251 aa7.42□□□□□ -1.22
ATXN3-216ENST00000545170 NOVP48745 357 aa7.42□□□□□ -1.22
ATXN3-216ENST00000545170 BCL6BQ8N143 479 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-216ENST00000545170 LRTM2Q8N967 370 aa7.42□□□□□ -1.22
ATXN3-216ENST00000545170 FER1L6-AS1Q8NA97 138 aa7.42□□□□□ -1.22
ATXN3-216ENST00000545170 CCL4L1Q8NHW4 92 aa7.42□□□□□ -1.22
ATXN3-216ENST00000545170 LOXL2Q9Y4K0 774 aa7.42□□□□□ -1.22
ATXN3-216ENST00000545170 HIGD1CA8MV81 97 aa7.42□□□□□ -1.22
ATXN3-216ENST00000545170 WIPI1Q5MNZ9 446 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-216ENST00000545170 OR9G4Q8NGQ1 327 aa7.42□□□□□ -1.22
ATXN3-216ENST00000545170 LINC00615Q96LM1 132 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-216ENST00000545170 RNASE7Q9H1E1 156 aaKnown RBP7.42□□□□□ -1.22
ATXN3-216ENST00000545170 PSMB11A5LHX3 300 aa7.41□□□□□ -1.22
ATXN3-216ENST00000545170 REG1BP48304 166 aa7.41□□□□□ -1.22
ATXN3-216ENST00000545170 MRPS21P82921 87 aaKnown RBP7.41□□□□□ -1.22
ATXN3-216ENST00000545170 PAPPA-AS1Q5QFB9 102 aa7.41□□□□□ -1.22
ATXN3-216ENST00000545170 VSTM2LQ96N03 204 aa7.41□□□□□ -1.22
ATXN3-216ENST00000545170 METTL26Q96S19 204 aa7.41□□□□□ -1.22
ATXN3-216ENST00000545170 TRBV5-5A0A0J9YX44 114 aa7.41□□□□□ -1.22
ATXN3-216ENST00000545170 GZMMP51124 257 aa7.41□□□□□ -1.22
ATXN3-216ENST00000545170 C2orf82Q6UX34 121 aa7.41□□□□□ -1.22
ATXN3-216ENST00000545170 NPCDR1Q9BY65 106 aa7.41□□□□□ -1.22
ATXN3-216ENST00000545170 ANKRD36CQ5JPF3 1778 aa7.41□□□□□ -1.22
ATXN3-216ENST00000545170 ANKRD31Q8N7Z5 1873 aa7.41□□□□□ -1.22
ATXN3-216ENST00000545170 GZMHP20718 246 aa7.41□□□□□ -1.22
ATXN3-216ENST00000545170 SRD5A2P31213 254 aa7.41□□□□□ -1.22
ATXN3-216ENST00000545170 GNB1LQ9BYB4 327 aa7.41□□□□□ -1.22
ATXN3-216ENST00000545170 NEUROG3Q9Y4Z2 214 aa7.41□□□□□ -1.22
ATXN3-216ENST00000545170 A0A1B0GUT8 65 aa7.41□□□□□ -1.22
ATXN3-216ENST00000545170 FAM90A26D6RGX4 464 aa7.41□□□□□ -1.22
ATXN3-216ENST00000545170 MLNRO43193 412 aa7.41□□□□□ -1.22
ATXN3-216ENST00000545170 LGALS1P09382 135 aaKnown RBP7.41□□□□□ -1.22
ATXN3-216ENST00000545170 TFF3Q07654 80 aa7.41□□□□□ -1.22
ATXN3-216ENST00000545170 CD200R1LQ6Q8B3 271 aa7.41□□□□□ -1.22
ATXN3-216ENST00000545170 CHCHD1Q96BP2 118 aaKnown RBP7.41□□□□□ -1.22
ATXN3-216ENST00000545170 TNFRSF19Q9NS68 423 aa7.41□□□□□ -1.22
ATXN3-216ENST00000545170 C1QTNF9P0C862 333 aa7.41□□□□□ -1.22
ATXN3-216ENST00000545170 FAM53BQ14153 422 aa7.41□□□□□ -1.22
ATXN3-216ENST00000545170 ORMDL3Q8N138 153 aa7.41□□□□□ -1.22
ATXN3-216ENST00000545170 MYEOVQ96EZ4 313 aa7.41□□□□□ -1.22
ATXN3-216ENST00000545170 CDCA3Q99618 268 aaPredicted RBP7.41□□□□□ -1.22
ATXN3-216ENST00000545170 IL23AQ9NPF7 189 aa7.41□□□□□ -1.22
ATXN3-216ENST00000545170 THAP10Q9P2Z0 257 aaPredicted RBP7.41□□□□□ -1.22
ATXN3-216ENST00000545170 CT62P0C5K7 136 aa7.41□□□□□ -1.22
ATXN3-216ENST00000545170 SAA1P0DJI8 122 aaPredicted RBP7.41□□□□□ -1.22
ATXN3-216ENST00000545170 UCP2P55851 309 aa7.41□□□□□ -1.22
ATXN3-216ENST00000545170 ZNF415Q09FC8 603 aa7.41□□□□□ -1.22
ATXN3-216ENST00000545170 CBLN3Q6UW01 205 aa7.41□□□□□ -1.22
ATXN3-216ENST00000545170 ATG4DQ86TL0 474 aaPredicted RBP7.41□□□□□ -1.22
ATXN3-216ENST00000545170 SLC25A28Q96A46 364 aa7.41□□□□□ -1.22
ATXN3-216ENST00000545170 UCP1P25874 307 aa7.4□□□□□ -1.22
ATXN3-216ENST00000545170 PGFP49763 221 aa7.4□□□□□ -1.22
ATXN3-216ENST00000545170 LHX2P50458 406 aa7.4□□□□□ -1.22
ATXN3-216ENST00000545170 GAGE1Q13065 139 aa7.4□□□□□ -1.22
ATXN3-216ENST00000545170 ZNF488Q96MN9 340 aa7.4□□□□□ -1.22
ATXN3-216ENST00000545170 GNRHR2Q96P88 292 aa7.4□□□□□ -1.22
ATXN3-216ENST00000545170 SNHG12Q9BXW3 62 aa7.4□□□□□ -1.22
ATXN3-216ENST00000545170 TMEM56-RWDD3S4R434 201 aa7.4□□□□□ -1.22
ATXN3-216ENST00000545170 SCN9AQ15858 1988 aa7.4□□□□□ -1.22
ATXN3-216ENST00000545170 CNTFRP26992 372 aa7.4□□□□□ -1.22
ATXN3-216ENST00000545170 HCP5Q6MZN7 132 aa7.4□□□□□ -1.22
ATXN3-216ENST00000545170 ZNF114Q8NC26 417 aa7.4□□□□□ -1.22
ATXN3-216ENST00000545170 PHLDA1Q8WV24 401 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-216ENST00000545170 MARS2Q96GW9 593 aaKnown RBP7.4□□□□□ -1.22
ATXN3-216ENST00000545170 TMUB1Q9BVT8 246 aa7.4□□□□□ -1.22
ATXN3-216ENST00000545170 REG4Q9BYZ8 158 aa7.4□□□□□ -1.22
ATXN3-216ENST00000545170 SF3B6Q9Y3B4 125 aaKnown RBP7.4□□□□□ -1.22
ATXN3-216ENST00000545170 CHTOPQ9Y3Y2 248 aaKnown RBP7.4□□□□□ -1.22
ATXN3-216ENST00000545170 H3BRM9 83 aa7.4□□□□□ -1.22
ATXN3-216ENST00000545170 M0R2P5 195 aa7.4□□□□□ -1.22
ATXN3-216ENST00000545170 ECSCRQ19T08 205 aa7.4□□□□□ -1.22
ATXN3-216ENST00000545170 OR51G1Q8NGK1 321 aa7.4□□□□□ -1.22
ATXN3-216ENST00000545170 NKX2-8O15522 239 aa7.4□□□□□ -1.23
ATXN3-216ENST00000545170 IL6RP08887 468 aaPredicted RBP7.4□□□□□ -1.23
ATXN3-216ENST00000545170 CA7P43166 264 aa7.4□□□□□ -1.23
ATXN3-216ENST00000545170 SOX8P57073 446 aa7.4□□□□□ -1.23
ATXN3-216ENST00000545170 C3AR1Q16581 482 aa7.4□□□□□ -1.23
ATXN3-216ENST00000545170 CEACAM21Q3KPI0 293 aa7.4□□□□□ -1.23
ATXN3-216ENST00000545170 S100A7L2Q5SY68 101 aa7.4□□□□□ -1.23
ATXN3-216ENST00000545170 CD5LO43866 347 aa7.4□□□□□ -1.23
ATXN3-216ENST00000545170 IGHV2-70P01814 119 aa7.4□□□□□ -1.23
ATXN3-216ENST00000545170 HBDP02042 147 aa7.4□□□□□ -1.23
ATXN3-216ENST00000545170 ZNF818PQ6ZRF7 136 aa7.4□□□□□ -1.23
ATXN3-216ENST00000545170 VN1R2Q8NFZ6 395 aa7.4□□□□□ -1.23
ATXN3-216ENST00000545170 C19orf24Q9BVV8 132 aa7.4□□□□□ -1.23
ATXN3-216ENST00000545170 TRBV5-3A0A0A0MS03 114 aa7.39□□□□□ -1.23
ATXN3-216ENST00000545170 GGTLC3B5MD39 225 aa7.39□□□□□ -1.23
ATXN3-216ENST00000545170 GUSBP1Q15486 140 aa7.39□□□□□ -1.23
ATXN3-216ENST00000545170 ACTL10Q5JWF8 245 aa7.39□□□□□ -1.23
ATXN3-216ENST00000545170 WDR82Q6UXN9 313 aa7.39□□□□□ -1.23
ATXN3-216ENST00000545170 LINC00305Q7Z4B0 112 aa7.39□□□□□ -1.23
ATXN3-216ENST00000545170 C1orf174Q8IYL3 243 aa7.39□□□□□ -1.23
ATXN3-216ENST00000545170 FMC1Q96HJ9 113 aa7.39□□□□□ -1.23
ATXN3-216ENST00000545170 JMJD8Q96S16 334 aa7.39□□□□□ -1.23
ATXN3-216ENST00000545170 A0A1W2PQF6 199 aa7.39□□□□□ -1.23
ATXN3-216ENST00000545170 MKRN2OSH3BPM6 223 aa7.39□□□□□ -1.23
ATXN3-216ENST00000545170 EDIL3O43854 480 aa7.39□□□□□ -1.23
ATXN3-216ENST00000545170 C1QAP02745 245 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms