RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 LINC00482Q8N8I6 264 aa4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 ZNF491Q8N8L2 437 aa4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 BVESQ8NE79 360 aa4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 LFNGQ8NES3 379 aa4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 DMBX1Q8NFW5 382 aa4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 OR6Q1Q8NGQ2 317 aa4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 OR13F1Q8NGS4 319 aa4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 OR6F1Q8NGZ6 308 aa4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 RAB2BQ8WUD1 216 aa4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 YIPF6Q96EC8 236 aa4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 OR2A7Q96R45 310 aa4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 OR4C12Q96R67 309 aa4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 TSC22D3Q99576 134 aa4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 FUNDC2Q9BWH2 189 aa4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 SLC5A7Q9GZV3 580 aa4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 AUNIPQ9H7T9 357 aa4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 HRASLSQ9HDD0 168 aa4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 FKBP11Q9NYL4 201 aa4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 EHFQ9NZC4 300 aa4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 COMMD3Q9UBI1 195 aa4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 CACFD1Q9UGQ2 172 aa4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 SACSQ9NZJ4 4579 aa4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 PLXNB1O43157 2135 aa4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 HYDINQ4G0P3 5121 aa4.38□□□□□ -1.71
CLSTN3-215ENST00000544584 COL7A1Q02388 2944 aa4.38□□□□□ -1.71
CLSTN3-215ENST00000544584 TRIM64CA6NLI5 447 aa4.38□□□□□ -1.71
CLSTN3-215ENST00000544584 LINC01548A6NM66 108 aa4.38□□□□□ -1.71
CLSTN3-215ENST00000544584 ADARB2-AS1A8MUL3 147 aa4.38□□□□□ -1.71
CLSTN3-215ENST00000544584 SEC14L6B5MCN3 397 aa4.38□□□□□ -1.71
CLSTN3-215ENST00000544584 G3V318 75 aa4.38□□□□□ -1.71
CLSTN3-215ENST00000544584 RGS5O15539 181 aa4.38□□□□□ -1.71
CLSTN3-215ENST00000544584 SCGB2A1O75556 95 aa4.38□□□□□ -1.71
CLSTN3-215ENST00000544584 B3GALNT1O75752 331 aa4.38□□□□□ -1.71
CLSTN3-215ENST00000544584 SNAPC5O75971 98 aa4.38□□□□□ -1.71
CLSTN3-215ENST00000544584 DEFA4P12838 97 aa4.38□□□□□ -1.71
CLSTN3-215ENST00000544584 CNTFRP26992 372 aa4.38□□□□□ -1.71
CLSTN3-215ENST00000544584 PPIFP30405 207 aaKnown RBP4.38□□□□□ -1.71
CLSTN3-215ENST00000544584 TAS2R20P59543 309 aa4.38□□□□□ -1.71
CLSTN3-215ENST00000544584 FXYD4P59646 89 aa4.38□□□□□ -1.71
CLSTN3-215ENST00000544584 RPL8P62917 257 aaKnown RBP4.38□□□□□ -1.71
CLSTN3-215ENST00000544584 CFHR3Q02985 330 aa4.38□□□□□ -1.71
CLSTN3-215ENST00000544584 SSBP1Q04837 148 aaKnown RBP4.38□□□□□ -1.71
CLSTN3-215ENST00000544584 ATP5G2Q06055 141 aa4.38□□□□□ -1.71
CLSTN3-215ENST00000544584 PLA2G7Q13093 441 aa4.38□□□□□ -1.71
CLSTN3-215ENST00000544584 PRSS8Q16651 343 aa4.38□□□□□ -1.71
CLSTN3-215ENST00000544584 AADACL3Q5VUY0 350 aa4.38□□□□□ -1.71
CLSTN3-215ENST00000544584 GPR107Q5VW38 600 aa4.38□□□□□ -1.71
CLSTN3-215ENST00000544584 FOXB2Q5VYV0 432 aa4.38□□□□□ -1.71
CLSTN3-215ENST00000544584 FAM53AQ6NSI3 398 aaPredicted RBP4.38□□□□□ -1.71
CLSTN3-215ENST00000544584 DHRS11Q6UWP2 260 aa4.38□□□□□ -1.71
CLSTN3-215ENST00000544584 C1QL4Q86Z23 238 aa4.38□□□□□ -1.71
CLSTN3-215ENST00000544584 MFSD4AQ8N468 514 aa4.38□□□□□ -1.71
CLSTN3-215ENST00000544584 OR1L6Q8NGR2 347 aa4.38□□□□□ -1.71
CLSTN3-215ENST00000544584 FCAMRQ8WWV6 532 aa4.38□□□□□ -1.71
CLSTN3-215ENST00000544584 SNAPC3Q92966 411 aa4.38□□□□□ -1.71
CLSTN3-215ENST00000544584 RAX2Q96IS3 184 aa4.38□□□□□ -1.71
CLSTN3-215ENST00000544584 RHOVQ96L33 236 aa4.38□□□□□ -1.71
CLSTN3-215ENST00000544584 SCGB3A2Q96PL1 93 aa4.38□□□□□ -1.71
CLSTN3-215ENST00000544584 P2RX4Q99571 388 aa4.38□□□□□ -1.71
CLSTN3-215ENST00000544584 SRSF8Q9BRL6 282 aaKnown RBP4.38□□□□□ -1.71
CLSTN3-215ENST00000544584 COMMD5Q9GZQ3 224 aa4.38□□□□□ -1.71
CLSTN3-215ENST00000544584 FAM212BQ9NTI7 297 aaPredicted RBP4.38□□□□□ -1.71
CLSTN3-215ENST00000544584 COA4Q9NYJ1 87 aa4.38□□□□□ -1.71
CLSTN3-215ENST00000544584 TAS2R8Q9NYW2 309 aa4.38□□□□□ -1.71
CLSTN3-215ENST00000544584 COMMD9Q9P000 198 aa4.38□□□□□ -1.71
CLSTN3-215ENST00000544584 PEMTQ9UBM1 199 aa4.38□□□□□ -1.71
CLSTN3-215ENST00000544584 SCOCQ9UIL1 159 aa4.38□□□□□ -1.71
CLSTN3-215ENST00000544584 BOLA1Q9Y3E2 137 aa4.38□□□□□ -1.71
CLSTN3-215ENST00000544584 PCLOQ9Y6V0 5065 aa4.38□□□□□ -1.71
CLSTN3-215ENST00000544584 MSGN1A6NI15 193 aa4.37□□□□□ -1.71
CLSTN3-215ENST00000544584 H0Y980 276 aa4.37□□□□□ -1.71
CLSTN3-215ENST00000544584 I3L521 148 aa4.37□□□□□ -1.71
CLSTN3-215ENST00000544584 J3QRK9 145 aa4.37□□□□□ -1.71
CLSTN3-215ENST00000544584 GPR31O00270 319 aa4.37□□□□□ -1.71
CLSTN3-215ENST00000544584 OVOL1O14753 267 aa4.37□□□□□ -1.71
CLSTN3-215ENST00000544584 SAP30O75446 220 aa4.37□□□□□ -1.71
CLSTN3-215ENST00000544584 KBTBD11O94819 623 aa4.37□□□□□ -1.71
CLSTN3-215ENST00000544584 GABARAPO95166 117 aa4.37□□□□□ -1.71
CLSTN3-215ENST00000544584 LY86O95711 162 aa4.37□□□□□ -1.71
CLSTN3-215ENST00000544584 SERPINE2P07093 398 aa4.37□□□□□ -1.71
CLSTN3-215ENST00000544584 CLEC2LP0C7M8 214 aa4.37□□□□□ -1.71
CLSTN3-215ENST00000544584 OR9G9P0C7N8 305 aa4.37□□□□□ -1.71
CLSTN3-215ENST00000544584 NHLRC4P0CG21 123 aaPredicted RBP4.37□□□□□ -1.71
CLSTN3-215ENST00000544584 RPA2P15927 270 aa4.37□□□□□ -1.71
CLSTN3-215ENST00000544584 RPL27AP46776 148 aaKnown RBP4.37□□□□□ -1.71
CLSTN3-215ENST00000544584 RPL5P46777 297 aaKnown RBP4.37□□□□□ -1.71
CLSTN3-215ENST00000544584 TMBIM6P55061 237 aa4.37□□□□□ -1.71
CLSTN3-215ENST00000544584 VBP1P61758 197 aa4.37□□□□□ -1.71
CLSTN3-215ENST00000544584 EGFEM1PQ0D2K5 195 aa4.37□□□□□ -1.71
CLSTN3-215ENST00000544584 DYRK1AQ13627 763 aa4.37□□□□□ -1.71
CLSTN3-215ENST00000544584 MEF2DQ14814 521 aa4.37□□□□□ -1.71
CLSTN3-215ENST00000544584 RPEL1Q2QD12 228 aa4.37□□□□□ -1.71
CLSTN3-215ENST00000544584 C10orf99Q6UWK7 81 aa4.37□□□□□ -1.71
CLSTN3-215ENST00000544584 Q6ZPA2 131 aa4.37□□□□□ -1.71
CLSTN3-215ENST00000544584 SLC38A6Q8IZM9 456 aa4.37□□□□□ -1.71
CLSTN3-215ENST00000544584 SPAG16Q8N0X2 631 aa4.37□□□□□ -1.71
CLSTN3-215ENST00000544584 CADM3Q8N126 398 aa4.37□□□□□ -1.71
CLSTN3-215ENST00000544584 CCDC71LQ8N9Z2 235 aa4.37□□□□□ -1.71
CLSTN3-215ENST00000544584 NECAP1Q8NC96 275 aa4.37□□□□□ -1.71
CLSTN3-215ENST00000544584 OR5T1Q8NG75 326 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms