RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 ARHGDIBP52566 201 aa24.61■■□□□ 1.53
CCM2-219ENST00000544363 TMEM177Q53S58 311 aa24.61■■□□□ 1.53
CCM2-219ENST00000544363 KRTAP1-3Q8IUG1 177 aa24.61■■□□□ 1.53
CCM2-219ENST00000544363 OSR1Q8TAX0 266 aaPredicted RBP24.61■■□□□ 1.53
CCM2-219ENST00000544363 RHOVQ96L33 236 aa24.61■■□□□ 1.53
CCM2-219ENST00000544363 REG4Q9BYZ8 158 aa24.61■■□□□ 1.53
CCM2-219ENST00000544363 CTNNBIP1Q9NSA3 81 aaPredicted RBP24.61■■□□□ 1.53
CCM2-219ENST00000544363 RCL1Q9Y2P8 373 aaKnown RBP24.61■■□□□ 1.53
CCM2-219ENST00000544363 NXPH3O95157 252 aa24.6■■□□□ 1.53
CCM2-219ENST00000544363 POLR2GP62487 172 aaKnown RBP eCLIP24.6■■□□□ 1.53
CCM2-219ENST00000544363 MINOS1Q5TGZ0 78 aa24.6■■□□□ 1.53
CCM2-219ENST00000544363 LHFPL4Q7Z7J7 247 aa24.6■■□□□ 1.53
CCM2-219ENST00000544363 MOB3BQ86TA1 216 aa24.6■■□□□ 1.53
CCM2-219ENST00000544363 FLYWCH2Q96CP2 140 aaKnown RBP24.6■■□□□ 1.53
CCM2-219ENST00000544363 AIFM2Q9BRQ8 373 aa24.6■■□□□ 1.53
CCM2-219ENST00000544363 TMEM140Q9NV12 185 aa24.6■■□□□ 1.53
CCM2-219ENST00000544363 MINOS1-NBL1R4GNA1 71 aa24.6■■□□□ 1.53
CCM2-219ENST00000544363 RNF223E7ERA6 249 aa24.59■■□□□ 1.53
CCM2-219ENST00000544363 SHOXO15266 292 aa24.59■■□□□ 1.53
CCM2-219ENST00000544363 OR9G9P0C7N8 305 aa24.59■■□□□ 1.53
CCM2-219ENST00000544363 ACOT7LQ6ZUV0 252 aa24.59■■□□□ 1.53
CCM2-219ENST00000544363 INO80EQ8NBZ0 244 aaPredicted RBP24.59■■□□□ 1.53
CCM2-219ENST00000544363 OR4C13Q8NGP0 309 aa24.59■■□□□ 1.53
CCM2-219ENST00000544363 MAGT1Q9H0U3 335 aa24.59■■□□□ 1.53
CCM2-219ENST00000544363 E5RGE8 158 aa24.58■■□□□ 1.53
CCM2-219ENST00000544363 LGALS4P56470 323 aa24.58■■□□□ 1.53
CCM2-219ENST00000544363 NSG2Q9Y328 171 aa24.58■■□□□ 1.53
CCM2-219ENST00000544363 TRAV20A0A0B4J274 112 aa24.57■■□□□ 1.52
CCM2-219ENST00000544363 A0A1W2PPI3 338 aa24.57■■□□□ 1.52
CCM2-219ENST00000544363 RNF222A6NCQ9 220 aa24.57■■□□□ 1.52
CCM2-219ENST00000544363 SRRM4A7MD48 611 aaKnown RBP24.57■■□□□ 1.52
CCM2-219ENST00000544363 FAM90A26D6RGX4 464 aa24.57■■□□□ 1.52
CCM2-219ENST00000544363 OR4A47Q6IF82 309 aa24.57■■□□□ 1.52
CCM2-219ENST00000544363 LINC01356Q8N9X3 169 aa24.57■■□□□ 1.52
CCM2-219ENST00000544363 HARBI1Q96MB7 349 aa24.57■■□□□ 1.52
CCM2-219ENST00000544363 Q96MF0 132 aa24.57■■□□□ 1.52
CCM2-219ENST00000544363 IGHV3-72A0A0B4J1Y9 119 aa24.57■■□□□ 1.52
CCM2-219ENST00000544363 KCNAB3O43448 404 aa24.57■■□□□ 1.52
CCM2-219ENST00000544363 OR2F2O95006 317 aa24.57■■□□□ 1.52
CCM2-219ENST00000544363 OR2F1Q13607 317 aa24.57■■□□□ 1.52
CCM2-219ENST00000544363 ZNF345Q14585 488 aa24.57■■□□□ 1.52
CCM2-219ENST00000544363 OR8H3Q8N146 312 aa24.57■■□□□ 1.52
CCM2-219ENST00000544363 C11orf1Q9H5F2 150 aa24.57■■□□□ 1.52
CCM2-219ENST00000544363 TBL2Q9Y4P3 447 aaKnown RBP24.57■■□□□ 1.52
CCM2-219ENST00000544363 HILPDAQ9Y5L2 63 aa24.57■■□□□ 1.52
CCM2-219ENST00000544363 WRBO00258 174 aa24.56■■□□□ 1.52
CCM2-219ENST00000544363 NUP62P37198 522 aaPredicted RBP24.56■■□□□ 1.52
CCM2-219ENST00000544363 AP2S1P53680 142 aaPredicted RBP24.56■■□□□ 1.52
CCM2-219ENST00000544363 TMUB2Q71RG4 321 aa24.56■■□□□ 1.52
CCM2-219ENST00000544363 HIF1ANQ9NWT6 349 aa24.56■■□□□ 1.52
CCM2-219ENST00000544363 AUP1Q9Y679 476 aa24.56■■□□□ 1.52
CCM2-219ENST00000544363 A0A0D9SG52 128 aa24.55■■□□□ 1.52
CCM2-219ENST00000544363 SSSCA1O60232 199 aa24.55■■□□□ 1.52
CCM2-219ENST00000544363 RBMXL2O75526 392 aaKnown RBP24.55■■□□□ 1.52
CCM2-219ENST00000544363 PVALBP20472 110 aaPredicted RBP24.55■■□□□ 1.52
CCM2-219ENST00000544363 RPS16P62249 146 aaKnown RBP24.55■■□□□ 1.52
CCM2-219ENST00000544363 OR4A16Q8NH70 328 aa24.55■■□□□ 1.52
CCM2-219ENST00000544363 MS4A7Q9GZW8 240 aaPredicted RBP24.55■■□□□ 1.52
CCM2-219ENST00000544363 HSPB7Q9UBY9 170 aa24.55■■□□□ 1.52
CCM2-219ENST00000544363 OOSP1A8MZH6 123 aa24.54■■□□□ 1.52
CCM2-219ENST00000544363 CHST1O43916 411 aa24.54■■□□□ 1.52
CCM2-219ENST00000544363 C4BPBP20851 252 aa24.54■■□□□ 1.52
CCM2-219ENST00000544363 GATA3P23771 443 aa24.54■■□□□ 1.52
CCM2-219ENST00000544363 S100A11P31949 105 aa24.54■■□□□ 1.52
CCM2-219ENST00000544363 RELBQ01201 579 aa24.54■■□□□ 1.52
CCM2-219ENST00000544363 KCNRGQ8N5I3 272 aa24.54■■□□□ 1.52
CCM2-219ENST00000544363 AQP10Q96PS8 301 aa24.54■■□□□ 1.52
CCM2-219ENST00000544363 TRAV3A0A0B4J244 114 aa24.53■■□□□ 1.52
CCM2-219ENST00000544363 CENPVL3A0A0U1RRI6 287 aa24.53■■□□□ 1.52
CCM2-219ENST00000544363 IL6RP08887 468 aaPredicted RBP24.53■■□□□ 1.52
CCM2-219ENST00000544363 TNFRSF9Q07011 255 aa24.53■■□□□ 1.52
CCM2-219ENST00000544363 AARDQ4LEZ3 155 aa24.53■■□□□ 1.52
CCM2-219ENST00000544363 MAPK1IP1LQ8NDC0 245 aa24.53■■□□□ 1.52
CCM2-219ENST00000544363 ARL6Q9H0F7 186 aa24.53■■□□□ 1.52
CCM2-219ENST00000544363 MSGN1A6NI15 193 aa24.53■■□□□ 1.52
CCM2-219ENST00000544363 TIMM23O14925 209 aa24.53■■□□□ 1.52
CCM2-219ENST00000544363 SYNGR2O43760 224 aa24.53■■□□□ 1.52
CCM2-219ENST00000544363 P2RY1P47900 373 aa24.53■■□□□ 1.52
CCM2-219ENST00000544363 CCDC144NLQ6NUI1 221 aa24.53■■□□□ 1.52
CCM2-219ENST00000544363 C7orf69Q9H7B7 122 aa24.53■■□□□ 1.52
CCM2-219ENST00000544363 BET1LQ9NYM9 111 aa24.53■■□□□ 1.52
CCM2-219ENST00000544363 SAA1P0DJI8 122 aaPredicted RBP24.52■■□□□ 1.52
CCM2-219ENST00000544363 HKR1P10072 659 aa24.52■■□□□ 1.52
CCM2-219ENST00000544363 OR2B8PP59922 312 aa24.52■■□□□ 1.52
CCM2-219ENST00000544363 VAMP2P63027 116 aa24.52■■□□□ 1.52
CCM2-219ENST00000544363 OPCMLQ14982 345 aa24.52■■□□□ 1.52
CCM2-219ENST00000544363 SSX2Q16385 188 aa24.52■■□□□ 1.52
CCM2-219ENST00000544363 PUSL1Q8N0Z8 303 aaKnown RBP24.52■■□□□ 1.52
CCM2-219ENST00000544363 RAB40CQ96S21 281 aa24.52■■□□□ 1.52
CCM2-219ENST00000544363 QTRT1Q9BXR0 403 aaKnown RBP24.52■■□□□ 1.52
CCM2-219ENST00000544363 FASNP49327 2511 aaKnown RBP24.52■■□□□ 1.52
CCM2-219ENST00000544363 RPL12P30050 165 aaKnown RBP24.51■■□□□ 1.51
CCM2-219ENST00000544363 LGALS7P47929 136 aa24.51■■□□□ 1.51
CCM2-219ENST00000544363 HABP2Q14520 560 aaPredicted RBP24.51■■□□□ 1.51
CCM2-219ENST00000544363 CFHR4Q92496 578 aa24.51■■□□□ 1.51
CCM2-219ENST00000544363 MALSU1Q96EH3 234 aa24.51■■□□□ 1.51
CCM2-219ENST00000544363 NPFFO15130 113 aa24.5■■□□□ 1.51
CCM2-219ENST00000544363 MED6O75586 246 aa24.5■■□□□ 1.51
CCM2-219ENST00000544363 IGLV2-23P01705 113 aa24.5■■□□□ 1.51
CCM2-219ENST00000544363 CD1BP29016 333 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms