RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 PNKDQ8N490 385 aa11.14□□□□□ -0.63
HCFC2-202ENST00000544223 DTD1Q8TEA8 209 aa11.14□□□□□ -0.63
HCFC2-202ENST00000544223 MS4A7Q9GZW8 240 aaPredicted RBP11.14□□□□□ -0.63
HCFC2-202ENST00000544223 NCOR1P1Q9H4R4 102 aa11.14□□□□□ -0.63
HCFC2-202ENST00000544223 HSPB7Q9UBY9 170 aa11.14□□□□□ -0.63
HCFC2-202ENST00000544223 RPL23AP62750 156 aaKnown RBP11.13□□□□□ -0.63
HCFC2-202ENST00000544223 KLRD1Q13241 179 aa11.13□□□□□ -0.63
HCFC2-202ENST00000544223 RNF141Q8WVD5 230 aa11.13□□□□□ -0.63
HCFC2-202ENST00000544223 NARS2Q96I59 477 aaKnown RBP11.13□□□□□ -0.63
HCFC2-202ENST00000544223 ZFP57Q9NU63 452 aa11.13□□□□□ -0.63
HCFC2-202ENST00000544223 LPAR3Q9UBY5 353 aa11.13□□□□□ -0.63
HCFC2-202ENST00000544223 FBXO7Q9Y3I1 522 aa11.13□□□□□ -0.63
HCFC2-202ENST00000544223 HELZ2Q9BYK8 2649 aaKnown RBP11.13□□□□□ -0.63
HCFC2-202ENST00000544223 FGF16O43320 207 aa11.13□□□□□ -0.63
HCFC2-202ENST00000544223 SLC25A6P12236 298 aa11.13□□□□□ -0.63
HCFC2-202ENST00000544223 ZNF616Q08AN1 781 aa11.13□□□□□ -0.63
HCFC2-202ENST00000544223 Q6ZRG5 221 aa11.13□□□□□ -0.63
HCFC2-202ENST00000544223 DTX2Q86UW9 622 aa11.13□□□□□ -0.63
HCFC2-202ENST00000544223 ZNF843Q8N446 348 aa11.13□□□□□ -0.63
HCFC2-202ENST00000544223 OR4A16Q8NH70 328 aa11.13□□□□□ -0.63
HCFC2-202ENST00000544223 APCP25054 2843 aa11.13□□□□□ -0.63
HCFC2-202ENST00000544223 IGFBP2P18065 325 aa11.12□□□□□ -0.63
HCFC2-202ENST00000544223 AGAP20933 346 aa11.12□□□□□ -0.63
HCFC2-202ENST00000544223 CD24P25063 80 aa11.12□□□□□ -0.63
HCFC2-202ENST00000544223 ZFP36P26651 326 aaKnown RBP11.12□□□□□ -0.63
HCFC2-202ENST00000544223 SULT1A1P50225 295 aa11.12□□□□□ -0.63
HCFC2-202ENST00000544223 RELBQ01201 579 aa11.12□□□□□ -0.63
HCFC2-202ENST00000544223 MSMO1Q15800 293 aa11.12□□□□□ -0.63
HCFC2-202ENST00000544223 LDLRAD2Q5SZI1 272 aa11.12□□□□□ -0.63
HCFC2-202ENST00000544223 STX12Q86Y82 276 aa11.12□□□□□ -0.63
HCFC2-202ENST00000544223 OR13D1Q8NGV5 346 aa11.12□□□□□ -0.63
HCFC2-202ENST00000544223 RAB40CQ96S21 281 aa11.12□□□□□ -0.63
HCFC2-202ENST00000544223 SLC25A31Q9H0C2 315 aa11.12□□□□□ -0.63
HCFC2-202ENST00000544223 LPAR2Q9HBW0 351 aa11.12□□□□□ -0.63
HCFC2-202ENST00000544223 SLC35D1Q9NTN3 355 aa11.12□□□□□ -0.63
HCFC2-202ENST00000544223 WSB1Q9Y6I7 421 aa11.12□□□□□ -0.63
HCFC2-202ENST00000544223 GAPDHP04406 335 aaKnown RBP11.12□□□□□ -0.63
HCFC2-202ENST00000544223 DEFA4P12838 97 aa11.12□□□□□ -0.63
HCFC2-202ENST00000544223 NQO2P16083 231 aa11.12□□□□□ -0.63
HCFC2-202ENST00000544223 TUSC1Q2TAM9 212 aa11.12□□□□□ -0.63
HCFC2-202ENST00000544223 THNSL2Q86YJ6 484 aa11.12□□□□□ -0.63
HCFC2-202ENST00000544223 VSIRQ9H7M9 311 aa11.12□□□□□ -0.63
HCFC2-202ENST00000544223 BORCS7-ASMTA0A0B4J1R7 106 aa11.11□□□□□ -0.63
HCFC2-202ENST00000544223 UBE2L5PA0A1B0GUS4 154 aa11.11□□□□□ -0.63
HCFC2-202ENST00000544223 PRH1P02810 166 aa11.11□□□□□ -0.63
HCFC2-202ENST00000544223 APELAP0DMC3 54 aa11.11□□□□□ -0.63
HCFC2-202ENST00000544223 SPP1P10451 314 aa11.11□□□□□ -0.63
HCFC2-202ENST00000544223 GNB2P62879 340 aa11.11□□□□□ -0.63
HCFC2-202ENST00000544223 OR8B3Q8NGG8 313 aa11.11□□□□□ -0.63
HCFC2-202ENST00000544223 OR2G3Q8NGZ4 309 aa11.11□□□□□ -0.63
HCFC2-202ENST00000544223 OR4S2Q8NH73 311 aa11.11□□□□□ -0.63
HCFC2-202ENST00000544223 OR8B2Q96RD0 313 aa11.11□□□□□ -0.63
HCFC2-202ENST00000544223 GINS3Q9BRX5 216 aa11.11□□□□□ -0.63
HCFC2-202ENST00000544223 TMEM133Q9H2Q1 129 aa11.11□□□□□ -0.63
HCFC2-202ENST00000544223 TPSG1Q9NRR2 321 aa11.11□□□□□ -0.63
HCFC2-202ENST00000544223 NUP50Q9UKX7 468 aa11.11□□□□□ -0.63
HCFC2-202ENST00000544223 IGHV2-26A0A0B4J1V2 119 aa11.11□□□□□ -0.63
HCFC2-202ENST00000544223 E7EUB6 86 aa11.11□□□□□ -0.63
HCFC2-202ENST00000544223 GPR37O15354 613 aa11.11□□□□□ -0.63
HCFC2-202ENST00000544223 NDUFA2O43678 99 aa11.11□□□□□ -0.63
HCFC2-202ENST00000544223 ENSAO43768 121 aaKnown RBP11.11□□□□□ -0.63
HCFC2-202ENST00000544223 CNTFRP26992 372 aa11.11□□□□□ -0.63
HCFC2-202ENST00000544223 ERVK-16P61578 105 aa11.11□□□□□ -0.63
HCFC2-202ENST00000544223 LCN2P80188 198 aa11.11□□□□□ -0.63
HCFC2-202ENST00000544223 SRSF1Q07955 248 aaKnown RBP eCLIP11.11□□□□□ -0.63
HCFC2-202ENST00000544223 SLC25A24Q6NUK1 477 aa11.11□□□□□ -0.63
HCFC2-202ENST00000544223 ZNF833PQ6ZTB9 187 aa11.11□□□□□ -0.63
HCFC2-202ENST00000544223 LILRB2Q8N423 598 aa11.11□□□□□ -0.63
HCFC2-202ENST00000544223 CD300LFQ8TDQ1 290 aa11.11□□□□□ -0.63
HCFC2-202ENST00000544223 RRHO14718 337 aa11.1□□□□□ -0.63
HCFC2-202ENST00000544223 SHOXO15266 292 aa11.1□□□□□ -0.63
HCFC2-202ENST00000544223 FGF2P09038 288 aa11.1□□□□□ -0.63
HCFC2-202ENST00000544223 COL8A1P27658 744 aa11.1□□□□□ -0.63
HCFC2-202ENST00000544223 THBS3P49746 956 aa11.1□□□□□ -0.63
HCFC2-202ENST00000544223 PJVKQ0ZLH3 352 aa11.1□□□□□ -0.63
HCFC2-202ENST00000544223 Q8N7P7 452 aa11.1□□□□□ -0.63
HCFC2-202ENST00000544223 BPIFCQ8NFQ6 507 aa11.1□□□□□ -0.63
HCFC2-202ENST00000544223 FAM213BQ8TBF2 198 aa11.1□□□□□ -0.63
HCFC2-202ENST00000544223 RAB1CQ92928 201 aa11.1□□□□□ -0.63
HCFC2-202ENST00000544223 SMIM8Q96KF7 97 aa11.1□□□□□ -0.63
HCFC2-202ENST00000544223 ARV1Q9H2C2 271 aa11.1□□□□□ -0.63
HCFC2-202ENST00000544223 COA4Q9NYJ1 87 aa11.1□□□□□ -0.63
HCFC2-202ENST00000544223 H0YJW9 148 aa11.1□□□□□ -0.63
HCFC2-202ENST00000544223 SAA1P0DJI8 122 aaPredicted RBP11.1□□□□□ -0.63
HCFC2-202ENST00000544223 SULT1A2P50226 295 aa11.1□□□□□ -0.63
HCFC2-202ENST00000544223 C10orf55Q5SWW7 151 aa11.1□□□□□ -0.63
HCFC2-202ENST00000544223 OR10W1Q8NGF6 305 aa11.1□□□□□ -0.63
HCFC2-202ENST00000544223 NEIL1Q96FI4 390 aaPredicted RBP11.1□□□□□ -0.63
HCFC2-202ENST00000544223 ATP5SQ99766 215 aa11.1□□□□□ -0.63
HCFC2-202ENST00000544223 BPESC1Q9GZL8 116 aa11.1□□□□□ -0.63
HCFC2-202ENST00000544223 CHODLQ9H9P2 273 aa11.1□□□□□ -0.63
HCFC2-202ENST00000544223 RAB9BQ9NP90 201 aa11.1□□□□□ -0.63
HCFC2-202ENST00000544223 MMP26Q9NRE1 261 aa11.1□□□□□ -0.63
HCFC2-202ENST00000544223 FBLN7Q53RD9 439 aa11.09□□□□□ -0.63
HCFC2-202ENST00000544223 TMEM170AQ8WVE7 144 aa11.09□□□□□ -0.63
HCFC2-202ENST00000544223 TIMD4Q96H15 378 aa11.09□□□□□ -0.63
HCFC2-202ENST00000544223 KMT2BQ9UMN6 2715 aaPredicted RBP11.09□□□□□ -0.63
HCFC2-202ENST00000544223 DOPEY2Q9Y3R5 2298 aa11.09□□□□□ -0.63
HCFC2-202ENST00000544223 C9JQL5 133 aa11.09□□□□□ -0.63
HCFC2-202ENST00000544223 ITGB1BP1O14713 200 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms