RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 CSMD3Q7Z407 3707 aa10.06□□□□□ -0.8
TNFRSF1A-215ENST00000543359 A0A087WXM4 84 aa10.05□□□□□ -0.8
TNFRSF1A-215ENST00000543359 XRCC3O43542 346 aa10.05□□□□□ -0.8
TNFRSF1A-215ENST00000543359 AIREO43918 545 aa10.05□□□□□ -0.8
TNFRSF1A-215ENST00000543359 SAA1P0DJI8 122 aaPredicted RBP10.05□□□□□ -0.8
TNFRSF1A-215ENST00000543359 APELAP0DMC3 54 aa10.05□□□□□ -0.8
TNFRSF1A-215ENST00000543359 AADACP22760 399 aa10.05□□□□□ -0.8
TNFRSF1A-215ENST00000543359 FCGR2CP31995 323 aa10.05□□□□□ -0.8
TNFRSF1A-215ENST00000543359 DCTN2Q13561 401 aaKnown RBP10.05□□□□□ -0.8
TNFRSF1A-215ENST00000543359 CDK10Q15131 360 aa10.05□□□□□ -0.8
TNFRSF1A-215ENST00000543359 KCTD9Q7L273 389 aa10.05□□□□□ -0.8
TNFRSF1A-215ENST00000543359 VKORC1L1Q8N0U8 176 aa10.05□□□□□ -0.8
TNFRSF1A-215ENST00000543359 MFSD4AQ8N468 514 aa10.05□□□□□ -0.8
TNFRSF1A-215ENST00000543359 GPHA2Q96T91 129 aa10.05□□□□□ -0.8
TNFRSF1A-215ENST00000543359 RANGRFQ9HD47 186 aaPredicted RBP10.05□□□□□ -0.8
TNFRSF1A-215ENST00000543359 A0A0G2JLM5 398 aa10.04□□□□□ -0.8
TNFRSF1A-215ENST00000543359 C13orf42A0A1B0GVH6 325 aa10.04□□□□□ -0.8
TNFRSF1A-215ENST00000543359 A0A1B0GW64 132 aa10.04□□□□□ -0.8
TNFRSF1A-215ENST00000543359 E7EUB6 86 aa10.04□□□□□ -0.8
TNFRSF1A-215ENST00000543359 SAP30O75446 220 aa10.04□□□□□ -0.8
TNFRSF1A-215ENST00000543359 DEFA5Q01523 94 aa10.04□□□□□ -0.8
TNFRSF1A-215ENST00000543359 ZNF45Q02386 682 aa10.04□□□□□ -0.8
TNFRSF1A-215ENST00000543359 KLF5Q13887 457 aaPredicted RBP10.04□□□□□ -0.8
TNFRSF1A-215ENST00000543359 MSMO1Q15800 293 aa10.04□□□□□ -0.8
TNFRSF1A-215ENST00000543359 TNXAQ16473 311 aa10.04□□□□□ -0.8
TNFRSF1A-215ENST00000543359 TIMM50Q3ZCQ8 353 aa10.04□□□□□ -0.8
TNFRSF1A-215ENST00000543359 OR2B11Q5JQS5 317 aa10.04□□□□□ -0.8
TNFRSF1A-215ENST00000543359 C10orf55Q5SWW7 151 aa10.04□□□□□ -0.8
TNFRSF1A-215ENST00000543359 ZNF343Q6P1L6 599 aa10.04□□□□□ -0.8
TNFRSF1A-215ENST00000543359 IL34Q6ZMJ4 242 aa10.04□□□□□ -0.8
TNFRSF1A-215ENST00000543359 CROCCP3Q8IVE0 287 aa10.04□□□□□ -0.8
TNFRSF1A-215ENST00000543359 PUSL1Q8N0Z8 303 aaKnown RBP10.04□□□□□ -0.8
TNFRSF1A-215ENST00000543359 HSD17B10Q99714 261 aaKnown RBP10.04□□□□□ -0.8
TNFRSF1A-215ENST00000543359 DIABLOQ9NR28 239 aa10.04□□□□□ -0.8
TNFRSF1A-215ENST00000543359 CCL28Q9NRJ3 127 aa10.04□□□□□ -0.8
TNFRSF1A-215ENST00000543359 ZNF355PQ9NSJ1 428 aa10.04□□□□□ -0.8
TNFRSF1A-215ENST00000543359 TAS2R8Q9NYW2 309 aa10.04□□□□□ -0.8
TNFRSF1A-215ENST00000543359 ANAPC10Q9UM13 185 aa10.04□□□□□ -0.8
TNFRSF1A-215ENST00000543359 SACSQ9NZJ4 4579 aa10.04□□□□□ -0.8
TNFRSF1A-215ENST00000543359 TRBV9A0A0B4J1U6 114 aa10.03□□□□□ -0.8
TNFRSF1A-215ENST00000543359 TEX22C9J3V5 150 aa10.03□□□□□ -0.8
TNFRSF1A-215ENST00000543359 TNFAIP8O95379 198 aa10.03□□□□□ -0.8
TNFRSF1A-215ENST00000543359 TRBV12-3P01733 135 aa10.03□□□□□ -0.8
TNFRSF1A-215ENST00000543359 IL6RP08887 468 aaPredicted RBP10.03□□□□□ -0.8
TNFRSF1A-215ENST00000543359 OR9G9P0C7N8 305 aa10.03□□□□□ -0.8
TNFRSF1A-215ENST00000543359 SPNP16150 400 aa10.03□□□□□ -0.8
TNFRSF1A-215ENST00000543359 LSM3P62310 102 aaKnown RBP10.03□□□□□ -0.8
TNFRSF1A-215ENST00000543359 ZNF66Q6ZN08 573 aa10.03□□□□□ -0.8
TNFRSF1A-215ENST00000543359 MMD2Q8IY49 270 aa10.03□□□□□ -0.8
TNFRSF1A-215ENST00000543359 TTC9CQ8N5M4 171 aa10.03□□□□□ -0.8
TNFRSF1A-215ENST00000543359 GIMAP1Q8WWP7 306 aa10.03□□□□□ -0.8
TNFRSF1A-215ENST00000543359 USMG5Q96IX5 58 aa10.03□□□□□ -0.8
TNFRSF1A-215ENST00000543359 ADAM30Q9UKF2 790 aa10.03□□□□□ -0.8
TNFRSF1A-215ENST00000543359 PRELID3BQ9Y3B1 194 aa10.03□□□□□ -0.8
TNFRSF1A-215ENST00000543359 ANKRD34BA5PLL1 514 aa10.02□□□□□ -0.81
TNFRSF1A-215ENST00000543359 MEIS3P1A6NDR6 274 aa10.02□□□□□ -0.81
TNFRSF1A-215ENST00000543359 PPYP01298 95 aa10.02□□□□□ -0.81
TNFRSF1A-215ENST00000543359 IGLV1-51P01701 117 aa10.02□□□□□ -0.81
TNFRSF1A-215ENST00000543359 PRH1P02810 166 aa10.02□□□□□ -0.81
TNFRSF1A-215ENST00000543359 FCER2P06734 321 aa10.02□□□□□ -0.81
TNFRSF1A-215ENST00000543359 NHLRC4P0CG21 123 aaPredicted RBP10.02□□□□□ -0.81
TNFRSF1A-215ENST00000543359 ZP3P21754 424 aa10.02□□□□□ -0.81
TNFRSF1A-215ENST00000543359 ARPC4P59998 168 aa10.02□□□□□ -0.81
TNFRSF1A-215ENST00000543359 UBE2NLQ5JXB2 153 aa10.02□□□□□ -0.81
TNFRSF1A-215ENST00000543359 OR5AP2Q8NGF4 316 aa10.02□□□□□ -0.81
TNFRSF1A-215ENST00000543359 OR13F1Q8NGS4 319 aa10.02□□□□□ -0.81
TNFRSF1A-215ENST00000543359 OR4S2Q8NH73 311 aa10.02□□□□□ -0.81
TNFRSF1A-215ENST00000543359 TMEM167AQ8TBQ9 72 aa10.02□□□□□ -0.81
TNFRSF1A-215ENST00000543359 SECTM1Q8WVN6 248 aa10.02□□□□□ -0.81
TNFRSF1A-215ENST00000543359 TCTEX1D2Q8WW35 142 aa10.02□□□□□ -0.81
TNFRSF1A-215ENST00000543359 ACOT12Q8WYK0 555 aa10.02□□□□□ -0.81
TNFRSF1A-215ENST00000543359 SLC25A46Q96AG3 418 aa10.02□□□□□ -0.81
TNFRSF1A-215ENST00000543359 S100A16Q96FQ6 103 aaKnown RBP10.02□□□□□ -0.81
TNFRSF1A-215ENST00000543359 DCUN1D5Q9BTE7 237 aa10.02□□□□□ -0.81
TNFRSF1A-215ENST00000543359 AKIP1Q9NQ31 210 aa10.02□□□□□ -0.81
TNFRSF1A-215ENST00000543359 COA4Q9NYJ1 87 aa10.02□□□□□ -0.81
TNFRSF1A-215ENST00000543359 PEF1Q9UBV8 284 aaKnown RBP10.02□□□□□ -0.81
TNFRSF1A-215ENST00000543359 MRPS7Q9Y2R9 242 aaKnown RBP10.02□□□□□ -0.81
TNFRSF1A-215ENST00000543359 TNFSF12O43508 249 aa10.01□□□□□ -0.81
TNFRSF1A-215ENST00000543359 KBTBD11O94819 623 aa10.01□□□□□ -0.81
TNFRSF1A-215ENST00000543359 OR2A4O95047 310 aa10.01□□□□□ -0.81
TNFRSF1A-215ENST00000543359 GP9P14770 177 aa10.01□□□□□ -0.81
TNFRSF1A-215ENST00000543359 NAT1P18440 290 aa10.01□□□□□ -0.81
TNFRSF1A-215ENST00000543359 CBX5P45973 191 aa10.01□□□□□ -0.81
TNFRSF1A-215ENST00000543359 RHOGP84095 191 aa10.01□□□□□ -0.81
TNFRSF1A-215ENST00000543359 KLK9Q2XQG4 91 aa10.01□□□□□ -0.81
TNFRSF1A-215ENST00000543359 DHRS11Q6UWP2 260 aa10.01□□□□□ -0.81
TNFRSF1A-215ENST00000543359 HAPLN4Q86UW8 402 aa10.01□□□□□ -0.81
TNFRSF1A-215ENST00000543359 SAMD12Q8N8I0 201 aa10.01□□□□□ -0.81
TNFRSF1A-215ENST00000543359 ZBTB34Q8NCN2 500 aa10.01□□□□□ -0.81
TNFRSF1A-215ENST00000543359 OR2A7Q96R45 310 aa10.01□□□□□ -0.81
TNFRSF1A-215ENST00000543359 PHB2Q99623 299 aa10.01□□□□□ -0.81
TNFRSF1A-215ENST00000543359 SPIN2AQ99865 258 aa10.01□□□□□ -0.81
TNFRSF1A-215ENST00000543359 SPIN2BQ9BPZ2 258 aa10.01□□□□□ -0.81
TNFRSF1A-215ENST00000543359 KLK9Q9UKQ9 250 aa10.01□□□□□ -0.81
TNFRSF1A-215ENST00000543359 DMRT1Q9Y5R6 373 aa10.01□□□□□ -0.81
TNFRSF1A-215ENST00000543359 HMX3A6NHT5 357 aa10□□□□□ -0.81
TNFRSF1A-215ENST00000543359 CGB1A6NKQ9 187 aa10□□□□□ -0.81
TNFRSF1A-215ENST00000543359 RBFOX2O43251 390 aaKnown RBP eCLIP10□□□□□ -0.81
TNFRSF1A-215ENST00000543359 CREBL2O60519 120 aaPredicted RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms