RNA–Protein interactions for RNA: ENST00000543239.1

CIT-212, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-212ENST00000543239 TMEM68Q96MH6 324 aa12.67□□□□□ -0.38
CIT-212ENST00000543239 DCUN1D5Q9BTE7 237 aa12.67□□□□□ -0.38
CIT-212ENST00000543239 CCDC59Q9P031 241 aaKnown RBP12.67□□□□□ -0.38
CIT-212ENST00000543239 VSIG4Q9Y279 399 aa12.67□□□□□ -0.38
CIT-212ENST00000543239 CCL24O00175 119 aa12.66□□□□□ -0.38
CIT-212ENST00000543239 PMP2P02689 132 aa12.66□□□□□ -0.38
CIT-212ENST00000543239 SAA1P0DJI8 122 aaPredicted RBP12.66□□□□□ -0.38
CIT-212ENST00000543239 IGLL1P15814 213 aa12.66□□□□□ -0.38
CIT-212ENST00000543239 CD40LGP29965 261 aa12.66□□□□□ -0.38
CIT-212ENST00000543239 HRH1P35367 487 aa12.66□□□□□ -0.38
CIT-212ENST00000543239 GNB1P62873 340 aa12.66□□□□□ -0.38
CIT-212ENST00000543239 RUNX1Q01196 453 aa12.66□□□□□ -0.38
CIT-212ENST00000543239 CATR1Q13166 79 aa12.66□□□□□ -0.38
CIT-212ENST00000543239 PRSS8Q16651 343 aa12.66□□□□□ -0.38
CIT-212ENST00000543239 MRGPRG-AS1Q2M3A8 158 aa12.66□□□□□ -0.38
CIT-212ENST00000543239 OR2B11Q5JQS5 317 aa12.66□□□□□ -0.38
CIT-212ENST00000543239 TMEM17Q86X19 198 aa12.66□□□□□ -0.38
CIT-212ENST00000543239 VSTM2AQ8TAG5 236 aa12.66□□□□□ -0.38
CIT-212ENST00000543239 DYNC2LI1Q8TCX1 351 aa12.66□□□□□ -0.38
CIT-212ENST00000543239 ZNF2Q9BSG1 426 aaPredicted RBP12.66□□□□□ -0.38
CIT-212ENST00000543239 SLA2Q9H6Q3 261 aa12.66□□□□□ -0.38
CIT-212ENST00000543239 EXTL2Q9UBQ6 330 aa12.66□□□□□ -0.38
CIT-212ENST00000543239 SCOCQ9UIL1 159 aa12.66□□□□□ -0.38
CIT-212ENST00000543239 H3BUA1 57 aa12.65□□□□□ -0.38
CIT-212ENST00000543239 RBFOX2O43251 390 aaKnown RBP eCLIP12.65□□□□□ -0.38
CIT-212ENST00000543239 WIPF1O43516 503 aa12.65□□□□□ -0.38
CIT-212ENST00000543239 HLA-DMAP28067 261 aa12.65□□□□□ -0.38
CIT-212ENST00000543239 BRWD1-AS2P59051 145 aa12.65□□□□□ -0.38
CIT-212ENST00000543239 ZNF818PQ6ZRF7 136 aa12.65□□□□□ -0.38
CIT-212ENST00000543239 MMD2Q8IY49 270 aa12.65□□□□□ -0.38
CIT-212ENST00000543239 OR6F1Q8NGZ6 308 aa12.65□□□□□ -0.38
CIT-212ENST00000543239 MCRIP2Q9BUT9 160 aaKnown RBP12.65□□□□□ -0.38
CIT-212ENST00000543239 GPR61Q9BZJ8 451 aa12.65□□□□□ -0.38
CIT-212ENST00000543239 I3L521 148 aa12.64□□□□□ -0.39
CIT-212ENST00000543239 RGS5O15539 181 aa12.64□□□□□ -0.39
CIT-212ENST00000543239 TNFSF12O43508 249 aa12.64□□□□□ -0.39
CIT-212ENST00000543239 HRASP01112 189 aa12.64□□□□□ -0.39
CIT-212ENST00000543239 GNRHRP30968 328 aa12.64□□□□□ -0.39
CIT-212ENST00000543239 FHL3Q13643 280 aa12.64□□□□□ -0.39
CIT-212ENST00000543239 TNXAQ16473 311 aa12.64□□□□□ -0.39
CIT-212ENST00000543239 DEFB136Q30KP8 78 aa12.64□□□□□ -0.39
CIT-212ENST00000543239 PDLIM3Q53GG5 364 aaPredicted RBP12.64□□□□□ -0.39
CIT-212ENST00000543239 IDO2Q6ZQW0 420 aa12.64□□□□□ -0.39
CIT-212ENST00000543239 ISOC1Q96CN7 298 aa12.64□□□□□ -0.39
CIT-212ENST00000543239 DUX3Q96PT4 197 aa12.64□□□□□ -0.39
CIT-212ENST00000543239 AIFM2Q9BRQ8 373 aa12.64□□□□□ -0.39
CIT-212ENST00000543239 MIXL1Q9H2W2 232 aa12.64□□□□□ -0.39
CIT-212ENST00000543239 ZNF430Q9H8G1 570 aaPredicted RBP12.64□□□□□ -0.39
CIT-212ENST00000543239 GNB4Q9HAV0 340 aa12.64□□□□□ -0.39
CIT-212ENST00000543239 H3BMQ9 156 aa12.63□□□□□ -0.39
CIT-212ENST00000543239 ACTL6BO94805 426 aa12.63□□□□□ -0.39
CIT-212ENST00000543239 KBTBD11O94819 623 aa12.63□□□□□ -0.39
CIT-212ENST00000543239 BRI3O95415 125 aa12.63□□□□□ -0.39
CIT-212ENST00000543239 VAX1Q5SQQ9 334 aa12.63□□□□□ -0.39
CIT-212ENST00000543239 REC114Q7Z4M0 266 aa12.63□□□□□ -0.39
CIT-212ENST00000543239 LAX1Q8IWV1 398 aa12.63□□□□□ -0.39
CIT-212ENST00000543239 SPAG16Q8N0X2 631 aa12.63□□□□□ -0.39
CIT-212ENST00000543239 PUSL1Q8N0Z8 303 aaKnown RBP12.63□□□□□ -0.39
CIT-212ENST00000543239 POC5Q8NA72 575 aa12.63□□□□□ -0.39
CIT-212ENST00000543239 CD300LFQ8TDQ1 290 aa12.63□□□□□ -0.39
CIT-212ENST00000543239 SRSF12Q8WXF0 261 aaKnown RBP12.63□□□□□ -0.39
CIT-212ENST00000543239 RHOVQ96L33 236 aa12.63□□□□□ -0.39
CIT-212ENST00000543239 GPHA2Q96T91 129 aa12.63□□□□□ -0.39
CIT-212ENST00000543239 FXYD6Q9H0Q3 95 aa12.63□□□□□ -0.39
CIT-212ENST00000543239 NOTCH3Q9UM47 2321 aa12.62□□□□□ -0.39
CIT-212ENST00000543239 CTDSP2O14595 271 aa12.62□□□□□ -0.39
CIT-212ENST00000543239 OR2A4O95047 310 aa12.62□□□□□ -0.39
CIT-212ENST00000543239 TSPAN5P62079 268 aa12.62□□□□□ -0.39
CIT-212ENST00000543239 MRPS10P82664 201 aaKnown RBP12.62□□□□□ -0.39
CIT-212ENST00000543239 ASPHD1Q5U4P2 390 aa12.62□□□□□ -0.39
CIT-212ENST00000543239 AADACL3Q5VUY0 350 aa12.62□□□□□ -0.39
CIT-212ENST00000543239 LPCAT3Q6P1A2 487 aa12.62□□□□□ -0.39
CIT-212ENST00000543239 CMTM1Q8IZ96 169 aa12.62□□□□□ -0.39
CIT-212ENST00000543239 OR11H1Q8NG94 326 aa12.62□□□□□ -0.39
CIT-212ENST00000543239 OR52I2Q8NH67 350 aa12.62□□□□□ -0.39
CIT-212ENST00000543239 TMEM167AQ8TBQ9 72 aa12.62□□□□□ -0.39
CIT-212ENST00000543239 OR2A7Q96R45 310 aa12.62□□□□□ -0.39
CIT-212ENST00000543239 ABHD1Q96SE0 405 aa12.62□□□□□ -0.39
CIT-212ENST00000543239 PHB2Q99623 299 aa12.62□□□□□ -0.39
CIT-212ENST00000543239 SPIN2AQ99865 258 aa12.62□□□□□ -0.39
CIT-212ENST00000543239 SPIN2BQ9BPZ2 258 aa12.62□□□□□ -0.39
CIT-212ENST00000543239 RABL2AQ9UBK7 228 aaPredicted RBP12.62□□□□□ -0.39
CIT-212ENST00000543239 KLK11Q9UBX7 282 aa12.62□□□□□ -0.39
CIT-212ENST00000543239 MTFP1Q9UDX5 166 aa12.62□□□□□ -0.39
CIT-212ENST00000543239 RABL2BQ9UNT1 228 aa12.62□□□□□ -0.39
CIT-212ENST00000543239 MSGN1A6NI15 193 aa12.61□□□□□ -0.39
CIT-212ENST00000543239 RAMP3O60896 148 aa12.61□□□□□ -0.39
CIT-212ENST00000543239 HPRT1P00492 218 aa12.61□□□□□ -0.39
CIT-212ENST00000543239 TRGV3P03979 118 aa12.61□□□□□ -0.39
CIT-212ENST00000543239 LGALS1P09382 135 aaKnown RBP12.61□□□□□ -0.39
CIT-212ENST00000543239 OR8U8P0C7N1 319 aa12.61□□□□□ -0.39
CIT-212ENST00000543239 TBPP20226 339 aa12.61□□□□□ -0.39
CIT-212ENST00000543239 MAS1LP35410 378 aa12.61□□□□□ -0.39
CIT-212ENST00000543239 TPPP2P59282 170 aa12.61□□□□□ -0.39
CIT-212ENST00000543239 TAS2R31P59538 309 aa12.61□□□□□ -0.39
CIT-212ENST00000543239 ZNF616Q08AN1 781 aa12.61□□□□□ -0.39
CIT-212ENST00000543239 FOXB2Q5VYV0 432 aa12.61□□□□□ -0.39
CIT-212ENST00000543239 VKORC1L1Q8N0U8 176 aa12.61□□□□□ -0.39
CIT-212ENST00000543239 OR51H1Q8NH63 302 aa12.61□□□□□ -0.39
CIT-212ENST00000543239 CASTOR1Q8WTX7 329 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms