RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 NPIPB6E9PJ23 425 aa11.2□□□□□ -0.62
TNC-212ENST00000542877 ZNHIT1O43257 154 aa11.2□□□□□ -0.62
TNC-212ENST00000542877 C2orf83Q53S99 150 aa11.2□□□□□ -0.62
TNC-212ENST00000542877 OR5P3Q8WZ94 311 aa11.2□□□□□ -0.62
TNC-212ENST00000542877 TMEM186Q96B77 213 aa11.2□□□□□ -0.62
TNC-212ENST00000542877 RPRMQ9NS64 109 aa11.2□□□□□ -0.62
TNC-212ENST00000542877 TRIP12Q14669 1992 aaPredicted RBP11.2□□□□□ -0.62
TNC-212ENST00000542877 LOC107984156A0A0G2JMH3 177 aa11.2□□□□□ -0.62
TNC-212ENST00000542877 PCOLCEQ15113 449 aa11.2□□□□□ -0.62
TNC-212ENST00000542877 SLC25A53Q5H9E4 307 aa11.2□□□□□ -0.62
TNC-212ENST00000542877 ARL17AQ8IVW1 177 aa11.2□□□□□ -0.62
TNC-212ENST00000542877 ABHD12Q8N2K0 398 aa11.2□□□□□ -0.62
TNC-212ENST00000542877 SCN4AP35499 1836 aa11.2□□□□□ -0.62
TNC-212ENST00000542877 SPRED2Q7Z698 418 aa11.19□□□□□ -0.62
TNC-212ENST00000542877 PRR7Q8TB68 274 aa11.19□□□□□ -0.62
TNC-212ENST00000542877 TDRD15B5MCY1 1934 aaKnown RBP11.19□□□□□ -0.62
TNC-212ENST00000542877 CTSBP07858 339 aa11.19□□□□□ -0.62
TNC-212ENST00000542877 CRYBA2P53672 197 aa11.19□□□□□ -0.62
TNC-212ENST00000542877 RCC1LQ96I51 464 aaKnown RBP11.19□□□□□ -0.62
TNC-212ENST00000542877 NUDT3O95989 172 aa11.19□□□□□ -0.62
TNC-212ENST00000542877 ANOS1P23352 680 aa11.19□□□□□ -0.62
TNC-212ENST00000542877 KIAA1644Q3SXP7 199 aa11.19□□□□□ -0.62
TNC-212ENST00000542877 TM4SF20Q53R12 229 aa11.19□□□□□ -0.62
TNC-212ENST00000542877 OR9G1Q8NH87 305 aa11.19□□□□□ -0.62
TNC-212ENST00000542877 HIST1H4GQ99525 98 aa11.19□□□□□ -0.62
TNC-212ENST00000542877 LINC00470Q9BZP3 86 aa11.19□□□□□ -0.62
TNC-212ENST00000542877 PTPRFP10586 1907 aa11.19□□□□□ -0.62
TNC-212ENST00000542877 GRIFINA4D1Z8 144 aa11.19□□□□□ -0.62
TNC-212ENST00000542877 MSGN1A6NI15 193 aa11.19□□□□□ -0.62
TNC-212ENST00000542877 C17orf51A8MQB3 221 aa11.19□□□□□ -0.62
TNC-212ENST00000542877 SAP25Q8TEE9 199 aa11.19□□□□□ -0.62
TNC-212ENST00000542877 WNT9BO14905 357 aa11.18□□□□□ -0.62
TNC-212ENST00000542877 RAB9AP51151 201 aa11.18□□□□□ -0.62
TNC-212ENST00000542877 FAM53AQ6NSI3 398 aaPredicted RBP11.18□□□□□ -0.62
TNC-212ENST00000542877 COL5A3P25940 1745 aaPredicted RBP11.18□□□□□ -0.62
TNC-212ENST00000542877 CTSSP25774 331 aa11.18□□□□□ -0.62
TNC-212ENST00000542877 ADIPOQQ15848 244 aa11.18□□□□□ -0.62
TNC-212ENST00000542877 AMMECR1LQ6DCA0 310 aa11.18□□□□□ -0.62
TNC-212ENST00000542877 TRBV23-1A0A0A0MS06 115 aa11.18□□□□□ -0.62
TNC-212ENST00000542877 PLSCR2Q9NRY7 297 aa11.18□□□□□ -0.62
TNC-212ENST00000542877 LOC101059948A0A1B0GTJ6 334 aa11.18□□□□□ -0.62
TNC-212ENST00000542877 CENPWQ5EE01 88 aa11.18□□□□□ -0.62
TNC-212ENST00000542877 UNQ5815/PRO19632Q6UWF5 114 aa11.18□□□□□ -0.62
TNC-212ENST00000542877 CX3CL1P78423 397 aa11.17□□□□□ -0.62
TNC-212ENST00000542877 LEMD1Q68G75 181 aa11.17□□□□□ -0.62
TNC-212ENST00000542877 NEU1Q99519 415 aa11.17□□□□□ -0.62
TNC-212ENST00000542877 STRCP1A6NGW2 1772 aa11.17□□□□□ -0.62
TNC-212ENST00000542877 UCP1P25874 307 aa11.17□□□□□ -0.62
TNC-212ENST00000542877 HBBP68871 147 aa11.17□□□□□ -0.62
TNC-212ENST00000542877 CYP2G1PQ6ZSU1 146 aa11.17□□□□□ -0.62
TNC-212ENST00000542877 LOXL4Q96JB6 756 aa11.17□□□□□ -0.62
TNC-212ENST00000542877 NPCDR1Q9BY65 106 aa11.17□□□□□ -0.62
TNC-212ENST00000542877 A0A087WWC5 75 aa11.17□□□□□ -0.62
TNC-212ENST00000542877 GDF9O60383 454 aa11.17□□□□□ -0.62
TNC-212ENST00000542877 SRP19P09132 144 aaKnown RBP11.17□□□□□ -0.62
TNC-212ENST00000542877 DNM1P46Q6ZS02 220 aa11.17□□□□□ -0.62
TNC-212ENST00000542877 SPSB2Q99619 263 aa11.17□□□□□ -0.62
TNC-212ENST00000542877 LPAR2Q9HBW0 351 aa11.17□□□□□ -0.62
TNC-212ENST00000542877 PHLDA3Q9Y5J5 127 aa11.17□□□□□ -0.62
TNC-212ENST00000542877 UCNP55089 124 aa11.17□□□□□ -0.62
TNC-212ENST00000542877 C19orf54Q5BKX5 351 aa11.17□□□□□ -0.62
TNC-212ENST00000542877 DNASE2BQ8WZ79 361 aa11.16□□□□□ -0.62
TNC-212ENST00000542877 EAF1Q96JC9 268 aaPredicted RBP11.16□□□□□ -0.62
TNC-212ENST00000542877 RTBDNQ9BSG5 229 aaPredicted RBP11.16□□□□□ -0.62
TNC-212ENST00000542877 LTBP4Q8N2S1 1624 aa11.16□□□□□ -0.62
TNC-212ENST00000542877 RNF222A6NCQ9 220 aa11.16□□□□□ -0.62
TNC-212ENST00000542877 RBFOX2O43251 390 aaKnown RBP eCLIP11.16□□□□□ -0.62
TNC-212ENST00000542877 LIPFP07098 398 aa11.16□□□□□ -0.62
TNC-212ENST00000542877 IL6RP08887 468 aaPredicted RBP11.16□□□□□ -0.62
TNC-212ENST00000542877 OTX1P32242 354 aaPredicted RBP11.16□□□□□ -0.62
TNC-212ENST00000542877 C1QL2Q7Z5L3 287 aa11.16□□□□□ -0.62
TNC-212ENST00000542877 NPIPB3Q92617 1050 aa11.16□□□□□ -0.62
TNC-212ENST00000542877 hCG_38984A0A1B0GV85 526 aa11.16□□□□□ -0.62
TNC-212ENST00000542877 GFRA1P56159 465 aa11.16□□□□□ -0.62
TNC-212ENST00000542877 LINC00114Q6XXX2 140 aa11.16□□□□□ -0.62
TNC-212ENST00000542877 TMEM136Q6ZRR5 245 aa11.16□□□□□ -0.62
TNC-212ENST00000542877 ZCCHC14Q8WYQ9 949 aaKnown RBP11.16□□□□□ -0.62
TNC-212ENST00000542877 TPRP12270 2363 aaKnown RBP11.16□□□□□ -0.62
TNC-212ENST00000542877 DPRXA6NFQ7 191 aa11.16□□□□□ -0.62
TNC-212ENST00000542877 SFTPCP11686 197 aa11.16□□□□□ -0.62
TNC-212ENST00000542877 CBLN1P23435 193 aa11.16□□□□□ -0.62
TNC-212ENST00000542877 HERPUD1Q15011 391 aa11.16□□□□□ -0.62
TNC-212ENST00000542877 WFIKKN1Q96NZ8 548 aa11.16□□□□□ -0.62
TNC-212ENST00000542877 UNC13CQ8NB66 2214 aa11.16□□□□□ -0.62
TNC-212ENST00000542877 ZIC3O60481 467 aa11.16□□□□□ -0.62
TNC-212ENST00000542877 GPX4P36969 197 aaPredicted RBP11.16□□□□□ -0.62
TNC-212ENST00000542877 VKORC1L1Q8N0U8 176 aa11.16□□□□□ -0.62
TNC-212ENST00000542877 WDYHV1Q96HA8 205 aa11.16□□□□□ -0.62
TNC-212ENST00000542877 IL36BQ9NZH7 164 aa11.16□□□□□ -0.62
TNC-212ENST00000542877 A0A1B0GV90 55 aa11.15□□□□□ -0.62
TNC-212ENST00000542877 PCSK4Q6UW60 755 aa11.15□□□□□ -0.62
TNC-212ENST00000542877 SHANK3Q9BYB0 1731 aa11.15□□□□□ -0.62
TNC-212ENST00000542877 ZNF646O15015 1829 aaPredicted RBP11.15□□□□□ -0.62
TNC-212ENST00000542877 PPIAL4CA0A0B4J2A2 164 aa11.15□□□□□ -0.62
TNC-212ENST00000542877 RRHO14718 337 aa11.15□□□□□ -0.62
TNC-212ENST00000542877 PPIAL4GP0DN37 164 aa11.15□□□□□ -0.62
TNC-212ENST00000542877 PF4V1P10720 104 aa11.15□□□□□ -0.62
TNC-212ENST00000542877 LGALS3P17931 250 aaKnown RBP11.15□□□□□ -0.62
TNC-212ENST00000542877 JOSD1Q15040 202 aaPredicted RBP11.15□□□□□ -0.62
TNC-212ENST00000542877 SAPCD1Q5SSQ6 148 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms