RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 MMD2Q8IY49 270 aa13.21□□□□□ -0.29
PPP1CA-210ENST00000542876 DDB2Q92466 427 aa13.21□□□□□ -0.29
PPP1CA-210ENST00000542876 PLEKHA3Q9HB20 300 aa13.21□□□□□ -0.29
PPP1CA-210ENST00000542876 TNCP24821 2201 aa13.21□□□□□ -0.29
PPP1CA-210ENST00000542876 LINC00473A8K010 186 aa13.2□□□□□ -0.3
PPP1CA-210ENST00000542876 RAB27BO00194 218 aa13.2□□□□□ -0.3
PPP1CA-210ENST00000542876 BMPR1BO00238 502 aa13.2□□□□□ -0.3
PPP1CA-210ENST00000542876 RBMXL2O75526 392 aaKnown RBP13.2□□□□□ -0.3
PPP1CA-210ENST00000542876 AQP4P55087 323 aa13.2□□□□□ -0.3
PPP1CA-210ENST00000542876 CDK10Q15131 360 aa13.2□□□□□ -0.3
PPP1CA-210ENST00000542876 CD300EQ496F6 205 aaPredicted RBP13.2□□□□□ -0.3
PPP1CA-210ENST00000542876 Q6ZS49 121 aa13.2□□□□□ -0.3
PPP1CA-210ENST00000542876 H1FOOQ8IZA3 346 aaPredicted RBP13.2□□□□□ -0.3
PPP1CA-210ENST00000542876 NECAP1Q8NC96 275 aa13.2□□□□□ -0.3
PPP1CA-210ENST00000542876 KCTD12Q96CX2 325 aaKnown RBP13.2□□□□□ -0.3
PPP1CA-210ENST00000542876 NEURL2Q9BR09 285 aa13.2□□□□□ -0.3
PPP1CA-210ENST00000542876 ZNF430Q9H8G1 570 aaPredicted RBP13.2□□□□□ -0.3
PPP1CA-210ENST00000542876 MRPS7Q9Y2R9 242 aaKnown RBP13.2□□□□□ -0.3
PPP1CA-210ENST00000542876 PRELID3BQ9Y3B1 194 aa13.2□□□□□ -0.3
PPP1CA-210ENST00000542876 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.19□□□□□ -0.3
PPP1CA-210ENST00000542876 TRBV9A0A0B4J1U6 114 aa13.19□□□□□ -0.3
PPP1CA-210ENST00000542876 TRAV1-2A0A0B4J238 106 aa13.19□□□□□ -0.3
PPP1CA-210ENST00000542876 IFITM5A6NNB3 132 aa13.19□□□□□ -0.3
PPP1CA-210ENST00000542876 J3QRK9 145 aa13.19□□□□□ -0.3
PPP1CA-210ENST00000542876 FCGR3BO75015 233 aa13.19□□□□□ -0.3
PPP1CA-210ENST00000542876 SAA1P0DJI8 122 aaPredicted RBP13.19□□□□□ -0.3
PPP1CA-210ENST00000542876 CD36P16671 472 aa13.19□□□□□ -0.3
PPP1CA-210ENST00000542876 MAP2K4P45985 399 aa13.19□□□□□ -0.3
PPP1CA-210ENST00000542876 MECP2P51608 486 aaKnown RBP13.19□□□□□ -0.3
PPP1CA-210ENST00000542876 OR10A3P58181 314 aa13.19□□□□□ -0.3
PPP1CA-210ENST00000542876 KCTD9Q7L273 389 aa13.19□□□□□ -0.3
PPP1CA-210ENST00000542876 TTC9CQ8N5M4 171 aa13.19□□□□□ -0.3
PPP1CA-210ENST00000542876 ZNF645Q8N7E2 425 aa13.19□□□□□ -0.3
PPP1CA-210ENST00000542876 STARD9Q9P2P6 4700 aa13.19□□□□□ -0.3
PPP1CA-210ENST00000542876 DNAH1Q9P2D7 4330 aa13.18□□□□□ -0.3
PPP1CA-210ENST00000542876 CSMD3Q7Z407 3707 aa13.18□□□□□ -0.3
PPP1CA-210ENST00000542876 DPPA5A6NC42 116 aa13.18□□□□□ -0.3
PPP1CA-210ENST00000542876 SLC22A5O76082 557 aa13.18□□□□□ -0.3
PPP1CA-210ENST00000542876 CTXN2P0C2S0 81 aa13.18□□□□□ -0.3
PPP1CA-210ENST00000542876 RAB3BP20337 219 aa13.18□□□□□ -0.3
PPP1CA-210ENST00000542876 DTYMKP23919 212 aa13.18□□□□□ -0.3
PPP1CA-210ENST00000542876 CRHBPP24387 322 aa13.18□□□□□ -0.3
PPP1CA-210ENST00000542876 ZNF45Q02386 682 aa13.18□□□□□ -0.3
PPP1CA-210ENST00000542876 GUCA2BQ16661 112 aa13.18□□□□□ -0.3
PPP1CA-210ENST00000542876 C15orf32Q32M92 178 aa13.18□□□□□ -0.3
PPP1CA-210ENST00000542876 ATG5Q9H1Y0 275 aa13.18□□□□□ -0.3
PPP1CA-210ENST00000542876 HIPK2Q9H2X6 1198 aa13.18□□□□□ -0.3
PPP1CA-210ENST00000542876 RETNQ9HD89 108 aa13.18□□□□□ -0.3
PPP1CA-210ENST00000542876 GGCTO75223 188 aaKnown RBP13.17□□□□□ -0.3
PPP1CA-210ENST00000542876 OR2J3O76001 311 aa13.17□□□□□ -0.3
PPP1CA-210ENST00000542876 ZNF367Q7RTV3 350 aa13.17□□□□□ -0.3
PPP1CA-210ENST00000542876 VSTM2AQ8TAG5 236 aa13.17□□□□□ -0.3
PPP1CA-210ENST00000542876 FAM110AQ9BQ89 295 aa13.17□□□□□ -0.3
PPP1CA-210ENST00000542876 ST6GALNAC5Q9BVH7 336 aa13.17□□□□□ -0.3
PPP1CA-210ENST00000542876 OR51E2Q9H255 320 aa13.17□□□□□ -0.3
PPP1CA-210ENST00000542876 TECRQ9NZ01 308 aaKnown RBP13.17□□□□□ -0.3
PPP1CA-210ENST00000542876 ZNF257Q9Y2Q1 563 aa13.17□□□□□ -0.3
PPP1CA-210ENST00000542876 OR2W1Q9Y3N9 320 aa13.17□□□□□ -0.3
PPP1CA-210ENST00000542876 TBCEQ15813 527 aaPredicted RBP13.16□□□□□ -0.3
PPP1CA-210ENST00000542876 DEFB114Q30KQ6 69 aa13.16□□□□□ -0.3
PPP1CA-210ENST00000542876 OR2B11Q5JQS5 317 aa13.16□□□□□ -0.3
PPP1CA-210ENST00000542876 C10orf55Q5SWW7 151 aa13.16□□□□□ -0.3
PPP1CA-210ENST00000542876 LINC00322Q6ZN03 302 aaPredicted RBP13.16□□□□□ -0.3
PPP1CA-210ENST00000542876 DEFB125Q8N687 156 aa13.16□□□□□ -0.3
PPP1CA-210ENST00000542876 SRD5A3Q9H8P0 318 aa13.16□□□□□ -0.3
PPP1CA-210ENST00000542876 IGKV1D-8A0A087WSZ0 117 aa13.15□□□□□ -0.3
PPP1CA-210ENST00000542876 C2orf70A6NJV1 201 aa13.15□□□□□ -0.3
PPP1CA-210ENST00000542876 ZNF785A8K8V0 405 aa13.15□□□□□ -0.3
PPP1CA-210ENST00000542876 OR11H12B2RN74 326 aa13.15□□□□□ -0.3
PPP1CA-210ENST00000542876 PPP5D1E7EU14 171 aa13.15□□□□□ -0.3
PPP1CA-210ENST00000542876 DHFRP00374 187 aa13.15□□□□□ -0.3
PPP1CA-210ENST00000542876 CD7P09564 240 aa13.15□□□□□ -0.3
PPP1CA-210ENST00000542876 FOLR2P14207 255 aa13.15□□□□□ -0.3
PPP1CA-210ENST00000542876 NFYAP23511 347 aaPredicted RBP13.15□□□□□ -0.3
PPP1CA-210ENST00000542876 KIR2DS2P43631 304 aa13.15□□□□□ -0.3
PPP1CA-210ENST00000542876 SSX1Q16384 188 aa13.15□□□□□ -0.3
PPP1CA-210ENST00000542876 CDNFQ49AH0 187 aa13.15□□□□□ -0.3
PPP1CA-210ENST00000542876 SLC16A13Q7RTY0 426 aa13.15□□□□□ -0.3
PPP1CA-210ENST00000542876 OR4S2Q8NH73 311 aa13.15□□□□□ -0.3
PPP1CA-210ENST00000542876 LYSTQ99698 3801 aa13.15□□□□□ -0.3
PPP1CA-210ENST00000542876 FBXL7Q9UJT9 491 aa13.15□□□□□ -0.3
PPP1CA-210ENST00000542876 BLOC1S6Q9UL45 172 aa13.15□□□□□ -0.3
PPP1CA-210ENST00000542876 RBMX2Q9Y388 322 aaKnown RBP13.15□□□□□ -0.3
PPP1CA-210ENST00000542876 EPPK1P58107 5090 aaKnown RBP13.14□□□□□ -0.31
PPP1CA-210ENST00000542876 HMX3A6NHT5 357 aa13.14□□□□□ -0.31
PPP1CA-210ENST00000542876 OR2C1O95371 312 aa13.14□□□□□ -0.31
PPP1CA-210ENST00000542876 HLA-AP01891 365 aaKnown RBP13.14□□□□□ -0.31
PPP1CA-210ENST00000542876 HLA-DQB1P01920 261 aa13.14□□□□□ -0.31
PPP1CA-210ENST00000542876 RPL27AP46776 148 aaKnown RBP13.14□□□□□ -0.31
PPP1CA-210ENST00000542876 HACD4Q5VWC8 232 aa13.14□□□□□ -0.31
PPP1CA-210ENST00000542876 VKORC1L1Q8N0U8 176 aa13.14□□□□□ -0.31
PPP1CA-210ENST00000542876 TCTEX1D2Q8WW35 142 aa13.14□□□□□ -0.31
PPP1CA-210ENST00000542876 FYTTD1Q96QD9 318 aaKnown RBP13.14□□□□□ -0.31
PPP1CA-210ENST00000542876 OR2A7Q96R45 310 aa13.14□□□□□ -0.31
PPP1CA-210ENST00000542876 HSD17B10Q99714 261 aaKnown RBP13.14□□□□□ -0.31
PPP1CA-210ENST00000542876 DCSTAMPQ9H295 470 aa13.14□□□□□ -0.31
PPP1CA-210ENST00000542876 NDUFB11Q9NX14 153 aa13.14□□□□□ -0.31
PPP1CA-210ENST00000542876 ELF5Q9UKW6 265 aaPredicted RBP13.14□□□□□ -0.31
PPP1CA-210ENST00000542876 TRDV1A0A1B0GX56 115 aa13.13□□□□□ -0.31
PPP1CA-210ENST00000542876 RBMY1BA6NDE4 496 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 233.5 ms