RNA–Protein interactions for RNA: ENST00000542830.5

LTBR-210, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-210ENST00000542830 MRGPRG-AS1Q2M3A8 158 aa13.46□□□□□ -0.25
LTBR-210ENST00000542830 UBE2NLQ5JXB2 153 aa13.46□□□□□ -0.25
LTBR-210ENST00000542830 ZNF66Q6ZN08 573 aa13.46□□□□□ -0.25
LTBR-210ENST00000542830 IDO2Q6ZQW0 420 aa13.46□□□□□ -0.25
LTBR-210ENST00000542830 MMD2Q8IY49 270 aa13.46□□□□□ -0.25
LTBR-210ENST00000542830 VSTM2AQ8TAG5 236 aa13.46□□□□□ -0.25
LTBR-210ENST00000542830 TCTEX1D2Q8WW35 142 aa13.46□□□□□ -0.25
LTBR-210ENST00000542830 SRSF12Q8WXF0 261 aaKnown RBP13.46□□□□□ -0.25
LTBR-210ENST00000542830 ACOT12Q8WYK0 555 aa13.46□□□□□ -0.25
LTBR-210ENST00000542830 USMG5Q96IX5 58 aa13.46□□□□□ -0.25
LTBR-210ENST00000542830 TINAGL1Q9GZM7 467 aaPredicted RBP13.46□□□□□ -0.25
LTBR-210ENST00000542830 SORL1Q92673 2214 aa13.45□□□□□ -0.26
LTBR-210ENST00000542830 MPPED1O15442 326 aa13.45□□□□□ -0.26
LTBR-210ENST00000542830 SAP30O75446 220 aa13.45□□□□□ -0.26
LTBR-210ENST00000542830 FCGR2CP31995 323 aa13.45□□□□□ -0.26
LTBR-210ENST00000542830 RPS19P39019 145 aaKnown RBP13.45□□□□□ -0.26
LTBR-210ENST00000542830 KIR2DS2P43631 304 aa13.45□□□□□ -0.26
LTBR-210ENST00000542830 RPL30P62888 115 aaKnown RBP13.45□□□□□ -0.26
LTBR-210ENST00000542830 EIF4EBP1Q13541 118 aaPredicted RBP13.45□□□□□ -0.26
LTBR-210ENST00000542830 ACSM6Q6P461 480 aa13.45□□□□□ -0.26
LTBR-210ENST00000542830 MFSD4AQ8N468 514 aa13.45□□□□□ -0.26
LTBR-210ENST00000542830 ZBTB34Q8NCN2 500 aa13.45□□□□□ -0.26
LTBR-210ENST00000542830 OR13F1Q8NGS4 319 aa13.45□□□□□ -0.26
LTBR-210ENST00000542830 SPIN2AQ99865 258 aa13.45□□□□□ -0.26
LTBR-210ENST00000542830 SPIN2BQ9BPZ2 258 aa13.45□□□□□ -0.26
LTBR-210ENST00000542830 ZNF430Q9H8G1 570 aaPredicted RBP13.45□□□□□ -0.26
LTBR-210ENST00000542830 COA4Q9NYJ1 87 aa13.45□□□□□ -0.26
LTBR-210ENST00000542830 LSM4Q9Y4Z0 139 aaKnown RBP13.45□□□□□ -0.26
LTBR-210ENST00000542830 DNAH9Q9NYC9 4486 aa13.45□□□□□ -0.26
LTBR-210ENST00000542830 PPYP01298 95 aa13.44□□□□□ -0.26
LTBR-210ENST00000542830 OR9G9P0C7N8 305 aa13.44□□□□□ -0.26
LTBR-210ENST00000542830 TGFBR1P36897 503 aa13.44□□□□□ -0.26
LTBR-210ENST00000542830 LSM3P62310 102 aaKnown RBP13.44□□□□□ -0.26
LTBR-210ENST00000542830 OR2B11Q5JQS5 317 aa13.44□□□□□ -0.26
LTBR-210ENST00000542830 VAX1Q5SQQ9 334 aa13.44□□□□□ -0.26
LTBR-210ENST00000542830 OR6Q1Q8NGQ2 317 aa13.44□□□□□ -0.26
LTBR-210ENST00000542830 SECTM1Q8WVN6 248 aa13.44□□□□□ -0.26
LTBR-210ENST00000542830 KCTD12Q96CX2 325 aaKnown RBP13.44□□□□□ -0.26
LTBR-210ENST00000542830 OR4C12Q96R67 309 aa13.44□□□□□ -0.26
LTBR-210ENST00000542830 IFT46Q9NQC8 304 aa13.44□□□□□ -0.26
LTBR-210ENST00000542830 TAS2R8Q9NYW2 309 aa13.44□□□□□ -0.26
LTBR-210ENST00000542830 TRIM64CA6NLI5 447 aa13.43□□□□□ -0.26
LTBR-210ENST00000542830 LY86O95711 162 aa13.43□□□□□ -0.26
LTBR-210ENST00000542830 TMEM69Q5SWH9 247 aa13.43□□□□□ -0.26
LTBR-210ENST00000542830 SAMD12Q8N8I0 201 aa13.43□□□□□ -0.26
LTBR-210ENST00000542830 ADAD2Q8NCV1 583 aaKnown RBP13.43□□□□□ -0.26
LTBR-210ENST00000542830 OR5AP2Q8NGF4 316 aa13.43□□□□□ -0.26
LTBR-210ENST00000542830 GIMAP1Q8WWP7 306 aa13.43□□□□□ -0.26
LTBR-210ENST00000542830 SNAPC3Q92966 411 aa13.43□□□□□ -0.26
LTBR-210ENST00000542830 AIFM2Q9BRQ8 373 aa13.43□□□□□ -0.26
LTBR-210ENST00000542830 ELOVL1Q9BW60 279 aa13.43□□□□□ -0.26
LTBR-210ENST00000542830 OR2A4O95047 310 aa13.42□□□□□ -0.26
LTBR-210ENST00000542830 HRASP01112 189 aa13.42□□□□□ -0.26
LTBR-210ENST00000542830 APELAP0DMC3 54 aa13.42□□□□□ -0.26
LTBR-210ENST00000542830 SLC25A42Q86VD7 318 aa13.42□□□□□ -0.26
LTBR-210ENST00000542830 BORCS5Q969J3 196 aa13.42□□□□□ -0.26
LTBR-210ENST00000542830 SLC25A46Q96AG3 418 aa13.42□□□□□ -0.26
LTBR-210ENST00000542830 OR2A7Q96R45 310 aa13.42□□□□□ -0.26
LTBR-210ENST00000542830 SLC5A7Q9GZV3 580 aa13.42□□□□□ -0.26
LTBR-210ENST00000542830 CCL28Q9NRJ3 127 aa13.42□□□□□ -0.26
LTBR-210ENST00000542830 PEF1Q9UBV8 284 aaKnown RBP13.42□□□□□ -0.26
LTBR-210ENST00000542830 KBTBD11O94819 623 aa13.41□□□□□ -0.26
LTBR-210ENST00000542830 NHLRC4P0CG21 123 aaPredicted RBP13.41□□□□□ -0.26
LTBR-210ENST00000542830 PTHLHP12272 177 aa13.41□□□□□ -0.26
LTBR-210ENST00000542830 MAS1LP35410 378 aa13.41□□□□□ -0.26
LTBR-210ENST00000542830 CATR1Q13166 79 aa13.41□□□□□ -0.26
LTBR-210ENST00000542830 DYRK1AQ13627 763 aa13.41□□□□□ -0.26
LTBR-210ENST00000542830 ZNF343Q6P1L6 599 aa13.41□□□□□ -0.26
LTBR-210ENST00000542830 PUSL1Q8N0Z8 303 aaKnown RBP13.41□□□□□ -0.26
LTBR-210ENST00000542830 TMEM167AQ8TBQ9 72 aa13.41□□□□□ -0.26
LTBR-210ENST00000542830 FUNDC2Q9BWH2 189 aa13.41□□□□□ -0.26
LTBR-210ENST00000542830 ANKRD34BA5PLL1 514 aa13.4□□□□□ -0.26
LTBR-210ENST00000542830 MEIS3P1A6NDR6 274 aa13.4□□□□□ -0.26
LTBR-210ENST00000542830 FAM223BA6NKX1 122 aa13.4□□□□□ -0.26
LTBR-210ENST00000542830 RBFOX2O43251 390 aaKnown RBP eCLIP13.4□□□□□ -0.26
LTBR-210ENST00000542830 TNFSF12O43508 249 aa13.4□□□□□ -0.26
LTBR-210ENST00000542830 FCER2P06734 321 aa13.4□□□□□ -0.26
LTBR-210ENST00000542830 BRWD1-AS2P59051 145 aa13.4□□□□□ -0.26
LTBR-210ENST00000542830 TAS2R20P59543 309 aa13.4□□□□□ -0.26
LTBR-210ENST00000542830 FXYD4P59646 89 aa13.4□□□□□ -0.26
LTBR-210ENST00000542830 HERV-K104P61576 105 aa13.4□□□□□ -0.26
LTBR-210ENST00000542830 C11orf87Q6NUJ2 197 aa13.4□□□□□ -0.26
LTBR-210ENST00000542830 FAM223AQ8IWN6 122 aa13.4□□□□□ -0.26
LTBR-210ENST00000542830 VKORC1L1Q8N0U8 176 aa13.4□□□□□ -0.26
LTBR-210ENST00000542830 TTC9CQ8N5M4 171 aa13.4□□□□□ -0.26
LTBR-210ENST00000542830 CMTM3Q96MX0 182 aa13.4□□□□□ -0.26
LTBR-210ENST00000542830 ANAPC10Q9UM13 185 aa13.4□□□□□ -0.26
LTBR-210ENST00000542830 SMAD5-AS1Q9Y6J3 95 aa13.4□□□□□ -0.26
LTBR-210ENST00000542830 GP9P14770 177 aa13.39□□□□□ -0.27
LTBR-210ENST00000542830 SPNP16150 400 aa13.39□□□□□ -0.27
LTBR-210ENST00000542830 RPL27AP46776 148 aaKnown RBP13.39□□□□□ -0.27
LTBR-210ENST00000542830 TAS2R46P59540 309 aa13.39□□□□□ -0.27
LTBR-210ENST00000542830 RHOGP84095 191 aa13.39□□□□□ -0.27
LTBR-210ENST00000542830 TATDN3Q17R31 274 aa13.39□□□□□ -0.27
LTBR-210ENST00000542830 FAM209BQ5JX69 171 aa13.39□□□□□ -0.27
LTBR-210ENST00000542830 C10orf55Q5SWW7 151 aa13.39□□□□□ -0.27
LTBR-210ENST00000542830 SPAG16Q8N0X2 631 aa13.39□□□□□ -0.27
LTBR-210ENST00000542830 OR4A5Q8NH83 315 aa13.39□□□□□ -0.27
LTBR-210ENST00000542830 EHFQ9NZC4 300 aa13.39□□□□□ -0.27
LTBR-210ENST00000542830 ZNF257Q9Y2Q1 563 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms