RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 TMEM50AO95807 157 aa4.84□□□□□ -1.63
XRCC4-206ENST00000542685 IGLV2-11P01706 119 aa4.84□□□□□ -1.63
XRCC4-206ENST00000542685 IGHG3P01860 377 aa4.84□□□□□ -1.63
XRCC4-206ENST00000542685 HMGN2P05204 90 aaKnown RBP4.84□□□□□ -1.63
XRCC4-206ENST00000542685 HPNP05981 417 aa4.84□□□□□ -1.63
XRCC4-206ENST00000542685 MRPL3P09001 348 aaKnown RBP4.84□□□□□ -1.63
XRCC4-206ENST00000542685 ZNF728P0DKX0 622 aa4.84□□□□□ -1.63
XRCC4-206ENST00000542685 IL9P15248 144 aa4.84□□□□□ -1.63
XRCC4-206ENST00000542685 HIST1H1DP16402 221 aaKnown RBP4.84□□□□□ -1.63
XRCC4-206ENST00000542685 NPY1RP25929 384 aa4.84□□□□□ -1.63
XRCC4-206ENST00000542685 OTX2P32243 289 aa4.84□□□□□ -1.63
XRCC4-206ENST00000542685 OPRM1P35372 400 aa4.84□□□□□ -1.63
XRCC4-206ENST00000542685 LHX2P50458 406 aa4.84□□□□□ -1.63
XRCC4-206ENST00000542685 EFNB2P52799 333 aa4.84□□□□□ -1.63
XRCC4-206ENST00000542685 KRTDAPP60985 99 aa4.84□□□□□ -1.63
XRCC4-206ENST00000542685 EWSR1Q01844 656 aaKnown RBP eCLIP4.84□□□□□ -1.63
XRCC4-206ENST00000542685 MEF2BQ02080 365 aaPredicted RBP4.84□□□□□ -1.63
XRCC4-206ENST00000542685 PLCXD2Q0VAA5 305 aa4.84□□□□□ -1.63
XRCC4-206ENST00000542685 EIF3IQ13347 325 aaKnown RBP4.84□□□□□ -1.63
XRCC4-206ENST00000542685 KRTAP24-1Q3LI83 254 aa4.84□□□□□ -1.63
XRCC4-206ENST00000542685 FFAR4Q5NUL3 377 aa4.84□□□□□ -1.63
XRCC4-206ENST00000542685 STPG1Q5TH74 334 aa4.84□□□□□ -1.63
XRCC4-206ENST00000542685 OR4C11Q6IEV9 310 aa4.84□□□□□ -1.63
XRCC4-206ENST00000542685 SLC48A1Q6P1K1 146 aa4.84□□□□□ -1.63
XRCC4-206ENST00000542685 SLC25A34Q6PIV7 304 aa4.84□□□□□ -1.63
XRCC4-206ENST00000542685 CXCL17Q6UXB2 119 aa4.84□□□□□ -1.63
XRCC4-206ENST00000542685 Q6ZS92 163 aa4.84□□□□□ -1.63
XRCC4-206ENST00000542685 OLIG3Q7RTU3 272 aa4.84□□□□□ -1.63
XRCC4-206ENST00000542685 BAGE3Q86Y29 109 aa4.84□□□□□ -1.63
XRCC4-206ENST00000542685 BAGE2Q86Y30 109 aa4.84□□□□□ -1.63
XRCC4-206ENST00000542685 NHLRC2Q8NBF2 726 aa4.84□□□□□ -1.63
XRCC4-206ENST00000542685 SCCPDHQ8NBX0 429 aa4.84□□□□□ -1.63
XRCC4-206ENST00000542685 OR2K2Q8NGT1 345 aa4.84□□□□□ -1.63
XRCC4-206ENST00000542685 PTH2Q96A98 100 aa4.84□□□□□ -1.63
XRCC4-206ENST00000542685 GPER1Q99527 375 aa4.84□□□□□ -1.63
XRCC4-206ENST00000542685 PHF7Q9BWX1 381 aaPredicted RBP4.84□□□□□ -1.63
XRCC4-206ENST00000542685 SMIM3Q9BZL3 60 aa4.84□□□□□ -1.63
XRCC4-206ENST00000542685 WDR61Q9GZS3 305 aaKnown RBP4.84□□□□□ -1.63
XRCC4-206ENST00000542685 GTSF1LQ9H1H1 148 aa4.84□□□□□ -1.63
XRCC4-206ENST00000542685 SH3BGRL3Q9H299 93 aa4.84□□□□□ -1.63
XRCC4-206ENST00000542685 MED31Q9Y3C7 131 aa4.84□□□□□ -1.63
XRCC4-206ENST00000542685 LSM5Q9Y4Y9 91 aaKnown RBP4.84□□□□□ -1.63
XRCC4-206ENST00000542685 ZNF780BQ9Y6R6 833 aa4.84□□□□□ -1.63
XRCC4-206ENST00000542685 CPAMD8Q8IZJ3 1885 aa4.83□□□□□ -1.64
XRCC4-206ENST00000542685 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.83□□□□□ -1.64
XRCC4-206ENST00000542685 hCG_38984A0A1B0GV85 526 aa4.83□□□□□ -1.64
XRCC4-206ENST00000542685 A4D1N5 150 aa4.83□□□□□ -1.64
XRCC4-206ENST00000542685 FBLL1A6NHQ2 334 aaKnown RBP4.83□□□□□ -1.64
XRCC4-206ENST00000542685 CRYM-AS1A6NIL9 109 aa4.83□□□□□ -1.64
XRCC4-206ENST00000542685 CPSF4LA6NMK7 179 aaKnown RBP4.83□□□□□ -1.64
XRCC4-206ENST00000542685 CD300LBA8K4G0 201 aa4.83□□□□□ -1.64
XRCC4-206ENST00000542685 DEGS1O15121 323 aa4.83□□□□□ -1.64
XRCC4-206ENST00000542685 PHF1O43189 567 aaPredicted RBP4.83□□□□□ -1.64
XRCC4-206ENST00000542685 ZNF324O75467 553 aaPredicted RBP4.83□□□□□ -1.64
XRCC4-206ENST00000542685 UPK3AO75631 287 aa4.83□□□□□ -1.64
XRCC4-206ENST00000542685 BRI3O95415 125 aa4.83□□□□□ -1.64
XRCC4-206ENST00000542685 DBIP07108 87 aaKnown RBP4.83□□□□□ -1.64
XRCC4-206ENST00000542685 OR9G9P0C7N8 305 aa4.83□□□□□ -1.64
XRCC4-206ENST00000542685 IGFBP3P17936 291 aaPredicted RBP4.83□□□□□ -1.64
XRCC4-206ENST00000542685 CRYBB3P26998 211 aa4.83□□□□□ -1.64
XRCC4-206ENST00000542685 CD70P32970 193 aa4.83□□□□□ -1.64
XRCC4-206ENST00000542685 DRD3P35462 400 aa4.83□□□□□ -1.64
XRCC4-206ENST00000542685 NCBP2P52298 156 aaKnown RBP eCLIP4.83□□□□□ -1.64
XRCC4-206ENST00000542685 CCL20P78556 96 aa4.83□□□□□ -1.64
XRCC4-206ENST00000542685 FAM27E3Q08E93 113 aa4.83□□□□□ -1.64
XRCC4-206ENST00000542685 CCL14Q16627 93 aa4.83□□□□□ -1.64
XRCC4-206ENST00000542685 MFSD12Q6NUT3 480 aa4.83□□□□□ -1.64
XRCC4-206ENST00000542685 C17orf99Q6UX52 265 aa4.83□□□□□ -1.64
XRCC4-206ENST00000542685 ASCL4Q6XD76 172 aa4.83□□□□□ -1.64
XRCC4-206ENST00000542685 RAB42Q8N4Z0 105 aa4.83□□□□□ -1.64
XRCC4-206ENST00000542685 ZNF114Q8NC26 417 aa4.83□□□□□ -1.64
XRCC4-206ENST00000542685 ATP6V0E2Q8NHE4 81 aa4.83□□□□□ -1.64
XRCC4-206ENST00000542685 MRPL30Q8TCC3 161 aaKnown RBP4.83□□□□□ -1.64
XRCC4-206ENST00000542685 TMEM255BQ8WV15 326 aa4.83□□□□□ -1.64
XRCC4-206ENST00000542685 C10orf35Q96D05 121 aa4.83□□□□□ -1.64
XRCC4-206ENST00000542685 CNRIP1Q96F85 164 aaPredicted RBP4.83□□□□□ -1.64
XRCC4-206ENST00000542685 ATP5SQ99766 215 aa4.83□□□□□ -1.64
XRCC4-206ENST00000542685 KXD1Q9BQD3 176 aa4.83□□□□□ -1.64
XRCC4-206ENST00000542685 GNB1LQ9BYB4 327 aa4.83□□□□□ -1.64
XRCC4-206ENST00000542685 COMMD5Q9GZQ3 224 aa4.83□□□□□ -1.64
XRCC4-206ENST00000542685 TMEM126AQ9H061 195 aa4.83□□□□□ -1.64
XRCC4-206ENST00000542685 PARP12Q9H0J9 701 aaKnown RBP4.83□□□□□ -1.64
XRCC4-206ENST00000542685 LINC00597Q9H2U6 94 aa4.83□□□□□ -1.64
XRCC4-206ENST00000542685 C11orf1Q9H5F2 150 aa4.83□□□□□ -1.64
XRCC4-206ENST00000542685 UBE2ZQ9H832 354 aaPredicted RBP4.83□□□□□ -1.64
XRCC4-206ENST00000542685 MED20Q9H944 212 aa4.83□□□□□ -1.64
XRCC4-206ENST00000542685 NPVFQ9HCQ7 196 aa4.83□□□□□ -1.64
XRCC4-206ENST00000542685 GNG13Q9P2W3 67 aa4.83□□□□□ -1.64
XRCC4-206ENST00000542685 RABAC1Q9UI14 185 aa4.83□□□□□ -1.64
XRCC4-206ENST00000542685 HSPB8Q9UJY1 196 aa4.83□□□□□ -1.64
XRCC4-206ENST00000542685 PLAGL1Q9UM63 463 aa4.83□□□□□ -1.64
XRCC4-206ENST00000542685 WASHC3Q9Y3C0 194 aa4.83□□□□□ -1.64
XRCC4-206ENST00000542685 HEATR5BQ9P2D3 2071 aa4.82□□□□□ -1.64
XRCC4-206ENST00000542685 TRAV8-6A0A0B4J262 113 aa4.82□□□□□ -1.64
XRCC4-206ENST00000542685 A0A0B4J2E0 115 aa4.82□□□□□ -1.64
XRCC4-206ENST00000542685 A0A1B0GX12 115 aa4.82□□□□□ -1.64
XRCC4-206ENST00000542685 A0A1W2PPV9 198 aa4.82□□□□□ -1.64
XRCC4-206ENST00000542685 C7orf71A4D174 169 aa4.82□□□□□ -1.64
XRCC4-206ENST00000542685 F8W1H4 67 aa4.82□□□□□ -1.64
XRCC4-206ENST00000542685 SAP18O00422 153 aaKnown RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms