RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 MMP26Q9NRE1 261 aa3.54□□□□□ -1.84
MDM2-228ENST00000542502 C19orf12Q9NSK7 152 aa3.54□□□□□ -1.84
MDM2-228ENST00000542502 CALYQ9NYX4 217 aa3.54□□□□□ -1.84
MDM2-228ENST00000542502 IDI2-AS1Q9NZ38 188 aa3.54□□□□□ -1.84
MDM2-228ENST00000542502 DPM3Q9P2X0 92 aa3.54□□□□□ -1.84
MDM2-228ENST00000542502 COMMD3Q9UBI1 195 aa3.54□□□□□ -1.84
MDM2-228ENST00000542502 GNG12Q9UBI6 72 aa3.54□□□□□ -1.84
MDM2-228ENST00000542502 JPT1Q9UK76 154 aa3.54□□□□□ -1.84
MDM2-228ENST00000542502 ARHGAP32A7KAX9 2087 aa3.53□□□□□ -1.84
MDM2-228ENST00000542502 ZNF469Q96JG9 3925 aaPredicted RBP3.53□□□□□ -1.84
MDM2-228ENST00000542502 TRAV18A0A075B6X5 111 aa3.53□□□□□ -1.84
MDM2-228ENST00000542502 IGHV2-26A0A0B4J1V2 119 aa3.53□□□□□ -1.84
MDM2-228ENST00000542502 CENPVL3A0A0U1RRI6 287 aa3.53□□□□□ -1.84
MDM2-228ENST00000542502 MEIOCA2RUB1 952 aa3.53□□□□□ -1.84
MDM2-228ENST00000542502 FAM25AB3EWG3 89 aa3.53□□□□□ -1.84
MDM2-228ENST00000542502 FAM25CB3EWG5 89 aa3.53□□□□□ -1.84
MDM2-228ENST00000542502 FAM25GB3EWG6 89 aa3.53□□□□□ -1.84
MDM2-228ENST00000542502 GABARAPH6UMI1 98 aa3.53□□□□□ -1.84
MDM2-228ENST00000542502 RAB29O14966 203 aa3.53□□□□□ -1.84
MDM2-228ENST00000542502 NPFFO15130 113 aa3.53□□□□□ -1.84
MDM2-228ENST00000542502 CTDSPLO15194 276 aa3.53□□□□□ -1.84
MDM2-228ENST00000542502 TCF21O43680 179 aa3.53□□□□□ -1.84
MDM2-228ENST00000542502 RBBP9O75884 186 aa3.53□□□□□ -1.84
MDM2-228ENST00000542502 HBZP02008 142 aa3.53□□□□□ -1.84
MDM2-228ENST00000542502 GAPDHP04406 335 aaKnown RBP3.53□□□□□ -1.84
MDM2-228ENST00000542502 CGB3P0DN86 165 aa3.53□□□□□ -1.84
MDM2-228ENST00000542502 CGB7P0DN87 165 aa3.53□□□□□ -1.84
MDM2-228ENST00000542502 FAUP35544 74 aaKnown RBP3.53□□□□□ -1.84
MDM2-228ENST00000542502 OR3A3P47888 321 aa3.53□□□□□ -1.84
MDM2-228ENST00000542502 DYNLT3P51808 116 aa3.53□□□□□ -1.84
MDM2-228ENST00000542502 DLX6P56179 175 aa3.53□□□□□ -1.84
MDM2-228ENST00000542502 TMEM50BP56557 158 aa3.53□□□□□ -1.84
MDM2-228ENST00000542502 LINC01547P58512 204 aaPredicted RBP3.53□□□□□ -1.84
MDM2-228ENST00000542502 HLA-DRB3P79483 266 aa3.53□□□□□ -1.84
MDM2-228ENST00000542502 CBX3Q13185 183 aa3.53□□□□□ -1.84
MDM2-228ENST00000542502 MSMO1Q15800 293 aa3.53□□□□□ -1.84
MDM2-228ENST00000542502 FAM71F2Q6NXP2 309 aa3.53□□□□□ -1.84
MDM2-228ENST00000542502 LPCAT3Q6P1A2 487 aa3.53□□□□□ -1.84
MDM2-228ENST00000542502 CNIH2Q6PI25 160 aa3.53□□□□□ -1.84
MDM2-228ENST00000542502 OR8H3Q8N146 312 aa3.53□□□□□ -1.84
MDM2-228ENST00000542502 BATF2Q8N1L9 274 aa3.53□□□□□ -1.84
MDM2-228ENST00000542502 ABHD12Q8N2K0 398 aa3.53□□□□□ -1.84
MDM2-228ENST00000542502 LINC00311Q8N616 119 aa3.53□□□□□ -1.84
MDM2-228ENST00000542502 Q8N7P7 452 aa3.53□□□□□ -1.84
MDM2-228ENST00000542502 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.53□□□□□ -1.84
MDM2-228ENST00000542502 OR10X1Q8NGY0 326 aa3.53□□□□□ -1.84
MDM2-228ENST00000542502 NDNFQ8TB73 568 aa3.53□□□□□ -1.84
MDM2-228ENST00000542502 SETD6Q8TBK2 473 aa3.53□□□□□ -1.84
MDM2-228ENST00000542502 MRPL30Q8TCC3 161 aaKnown RBP3.53□□□□□ -1.84
MDM2-228ENST00000542502 MRGPRDQ8TDS7 321 aa3.53□□□□□ -1.84
MDM2-228ENST00000542502 CAPSLQ8WWF8 208 aa3.53□□□□□ -1.84
MDM2-228ENST00000542502 S100ZQ8WXG8 99 aa3.53□□□□□ -1.84
MDM2-228ENST00000542502 LHX4Q969G2 390 aa3.53□□□□□ -1.84
MDM2-228ENST00000542502 DIRAS2Q96HU8 199 aa3.53□□□□□ -1.84
MDM2-228ENST00000542502 TBX15Q96SF7 602 aa3.53□□□□□ -1.84
MDM2-228ENST00000542502 S1PR3Q99500 378 aa3.53□□□□□ -1.84
MDM2-228ENST00000542502 SULT4A1Q9BR01 284 aa3.53□□□□□ -1.84
MDM2-228ENST00000542502 GINS4Q9BRT9 223 aa3.53□□□□□ -1.84
MDM2-228ENST00000542502 NICN1Q9BSH3 213 aa3.53□□□□□ -1.84
MDM2-228ENST00000542502 C6orf62Q9GZU0 229 aaPredicted RBP3.53□□□□□ -1.84
MDM2-228ENST00000542502 NXF2Q9GZY0 626 aaKnown RBP3.53□□□□□ -1.84
MDM2-228ENST00000542502 Q9N2K0 584 aa3.53□□□□□ -1.84
MDM2-228ENST00000542502 OR2S2Q9NQN1 319 aa3.53□□□□□ -1.84
MDM2-228ENST00000542502 ABCB10Q9NRK6 738 aa3.53□□□□□ -1.84
MDM2-228ENST00000542502 NECAP2Q9NVZ3 263 aa3.53□□□□□ -1.84
MDM2-228ENST00000542502 PIPOXQ9P0Z9 390 aa3.53□□□□□ -1.84
MDM2-228ENST00000542502 AK3Q9UIJ7 227 aa3.53□□□□□ -1.84
MDM2-228ENST00000542502 ZNF221Q9UK13 617 aa3.53□□□□□ -1.84
MDM2-228ENST00000542502 OBSCNQ5VST9 7968 aa3.53□□□□□ -1.84
MDM2-228ENST00000542502 FN1P02751 2386 aaKnown RBP3.53□□□□□ -1.84
MDM2-228ENST00000542502 TRAV40A0A0B4J280 105 aa3.52□□□□□ -1.85
MDM2-228ENST00000542502 A0A1B0GW55 424 aa3.52□□□□□ -1.85
MDM2-228ENST00000542502 A0A1W2PPQ1 181 aa3.52□□□□□ -1.85
MDM2-228ENST00000542502 FABP12A6NFH5 140 aa3.52□□□□□ -1.85
MDM2-228ENST00000542502 C15orf62A8K5M9 175 aa3.52□□□□□ -1.85
MDM2-228ENST00000542502 VGLL3A8MV65 326 aa3.52□□□□□ -1.85
MDM2-228ENST00000542502 ODF3BA8MYP8 253 aa3.52□□□□□ -1.85
MDM2-228ENST00000542502 C12orf77C9JDV5 145 aa3.52□□□□□ -1.85
MDM2-228ENST00000542502 C15orf65H3BRN8 121 aa3.52□□□□□ -1.85
MDM2-228ENST00000542502 BUB1B-PAK6H3BSN5 160 aa3.52□□□□□ -1.85
MDM2-228ENST00000542502 M0QZK8 103 aa3.52□□□□□ -1.85
MDM2-228ENST00000542502 FABP7O15540 132 aa3.52□□□□□ -1.85
MDM2-228ENST00000542502 HPGDSO60760 199 aa3.52□□□□□ -1.85
MDM2-228ENST00000542502 IGLV1-47P01700 117 aa3.52□□□□□ -1.85
MDM2-228ENST00000542502 IFNA6P05013 189 aa3.52□□□□□ -1.85
MDM2-228ENST00000542502 ARG1P05089 322 aa3.52□□□□□ -1.85
MDM2-228ENST00000542502 FCGR3AP08637 254 aa3.52□□□□□ -1.85
MDM2-228ENST00000542502 DUX4L2P0CJ85 424 aa3.52□□□□□ -1.85
MDM2-228ENST00000542502 DUX4L3P0CJ86 424 aa3.52□□□□□ -1.85
MDM2-228ENST00000542502 DUX4L4P0CJ87 422 aa3.52□□□□□ -1.85
MDM2-228ENST00000542502 DUX4L5P0CJ88 424 aa3.52□□□□□ -1.85
MDM2-228ENST00000542502 DUX4L6P0CJ89 424 aa3.52□□□□□ -1.85
MDM2-228ENST00000542502 DUX4L7P0CJ90 424 aa3.52□□□□□ -1.85
MDM2-228ENST00000542502 GNB3P16520 340 aa3.52□□□□□ -1.85
MDM2-228ENST00000542502 CCL3L1P16619 93 aa3.52□□□□□ -1.85
MDM2-228ENST00000542502 RCC1P18754 421 aaPredicted RBP3.52□□□□□ -1.85
MDM2-228ENST00000542502 ELK1P19419 428 aa3.52□□□□□ -1.85
MDM2-228ENST00000542502 NFYBP25208 207 aa3.52□□□□□ -1.85
MDM2-228ENST00000542502 RCVRNP35243 200 aa3.52□□□□□ -1.85
MDM2-228ENST00000542502 SSTR5P35346 364 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms