RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 H7C2Y5 167 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 SLC33A1O00400 549 aaPredicted RBP4.3□□□□□ -1.72
CPSF7-220ENST00000541963 OR7C1O76099 320 aaPredicted RBP4.3□□□□□ -1.72
CPSF7-220ENST00000541963 CDRT1O95170 752 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 MAS1P04201 325 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 S100A9P06702 114 aaKnown RBP4.3□□□□□ -1.72
CPSF7-220ENST00000541963 UBBP0CG47 229 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 SMIM6P0DI80 62 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 IGFBP3P17936 291 aaPredicted RBP4.3□□□□□ -1.72
CPSF7-220ENST00000541963 GZMHP20718 246 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 SERPINA2P20848 420 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 GADD45AP24522 165 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 HTR1DP28221 377 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 BRS3P32247 399 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 CEACAM3P40198 252 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 OR3A1P47881 315 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 OR3A4PP47883 348 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 DLX6P56179 175 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 RPS11P62280 158 aaKnown RBP eCLIP4.3□□□□□ -1.72
CPSF7-220ENST00000541963 PRB3Q04118 309 aaPredicted RBP4.3□□□□□ -1.72
CPSF7-220ENST00000541963 AESQ08117 197 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 ZNF415Q09FC8 603 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 MLLT11Q13015 90 aaPredicted RBP4.3□□□□□ -1.72
CPSF7-220ENST00000541963 LRRC75BQ2VPJ9 315 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 SLC22A6Q4U2R8 563 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 ACSM3Q53FZ2 586 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 NHLRC3Q5JS37 347 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 OLFML2AQ68BL7 652 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 GLT8D1Q68CQ7 371 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 LAIR2Q6ISS4 152 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 HCP5Q6MZN7 132 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 GLIPR1L1Q6UWM5 242 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 FAM131AQ6UXB0 335 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 HEPN1Q6WQI6 88 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 ABHD12Q8N2K0 398 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 C9orf62Q8N4C0 152 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 C11orf42Q8N5U0 333 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 TPRX1Q8N7U7 411 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 STPG4Q8N801 248 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 ZNF485Q8NCK3 441 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 OR11H6Q8NGC7 330 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 OR11H4Q8NGC9 324 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 OR10A7Q8NGE5 316 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 RGP1Q92546 391 aaPredicted RBP4.3□□□□□ -1.72
CPSF7-220ENST00000541963 PHYHIPQ92561 330 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 SLC25A46Q96AG3 418 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 PGLYRP3Q96LB9 341 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 DERL3Q96Q80 235 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 CLEC7AQ9BXN2 247 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 MED28Q9H204 178 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 TMEM133Q9H2Q1 129 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 DNAJC4Q9NNZ3 241 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 BIN3Q9NQY0 253 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 SCP2D1Q9UJQ7 156 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 PITPNC1Q9UKF7 332 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 WDR83OSQ9Y284 106 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 MRPS28Q9Y2Q9 187 aaKnown RBP4.3□□□□□ -1.72
CPSF7-220ENST00000541963 V9GYH0 126 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 DNHD1Q96M86 4753 aa4.3□□□□□ -1.72
CPSF7-220ENST00000541963 FBN1P35555 2871 aaKnown RBP4.3□□□□□ -1.72
CPSF7-220ENST00000541963 MEIKINA0A087WXM9 373 aa4.29□□□□□ -1.72
CPSF7-220ENST00000541963 IGHV2-26A0A0B4J1V2 119 aa4.29□□□□□ -1.72
CPSF7-220ENST00000541963 KBTBD11-OT1A0A1B0GTJ5 212 aa4.29□□□□□ -1.72
CPSF7-220ENST00000541963 TMEM30CPA0ZSE6 113 aa4.29□□□□□ -1.72
CPSF7-220ENST00000541963 ZNF98A6NK75 572 aa4.29□□□□□ -1.72
CPSF7-220ENST00000541963 F8W036 122 aa4.29□□□□□ -1.72
CPSF7-220ENST00000541963 INMT-MINDY4F8WBC2 141 aa4.29□□□□□ -1.72
CPSF7-220ENST00000541963 ATP6V0E1O15342 81 aa4.29□□□□□ -1.72
CPSF7-220ENST00000541963 LYRM1O43325 122 aa4.29□□□□□ -1.72
CPSF7-220ENST00000541963 B3GALNT1O75752 331 aa4.29□□□□□ -1.72
CPSF7-220ENST00000541963 ARL6IP5O75915 188 aa4.29□□□□□ -1.72
CPSF7-220ENST00000541963 GLAP06280 429 aa4.29□□□□□ -1.72
CPSF7-220ENST00000541963 HSMCR30P0CW71 290 aa4.29□□□□□ -1.72
CPSF7-220ENST00000541963 SLC2A2P11168 524 aaPredicted RBP4.29□□□□□ -1.72
CPSF7-220ENST00000541963 SPNP16150 400 aa4.29□□□□□ -1.72
CPSF7-220ENST00000541963 SRMP19623 302 aa4.29□□□□□ -1.72
CPSF7-220ENST00000541963 OMGP23515 440 aa4.29□□□□□ -1.72
CPSF7-220ENST00000541963 CDK2P24941 298 aa4.29□□□□□ -1.72
CPSF7-220ENST00000541963 GLIPR1P48060 266 aa4.29□□□□□ -1.72
CPSF7-220ENST00000541963 RAB13P51153 203 aa4.29□□□□□ -1.72
CPSF7-220ENST00000541963 DLX1P56177 255 aa4.29□□□□□ -1.72
CPSF7-220ENST00000541963 RBM11P57052 281 aaKnown RBP4.29□□□□□ -1.72
CPSF7-220ENST00000541963 RAB4BP61018 213 aa4.29□□□□□ -1.72
CPSF7-220ENST00000541963 LSM3P62310 102 aaKnown RBP4.29□□□□□ -1.72
CPSF7-220ENST00000541963 ARL16Q0P5N6 197 aa4.29□□□□□ -1.72
CPSF7-220ENST00000541963 TPBGQ13641 420 aa4.29□□□□□ -1.72
CPSF7-220ENST00000541963 ATXN7L3Q14CW9 347 aaPredicted RBP4.29□□□□□ -1.72
CPSF7-220ENST00000541963 FAM189A2Q15884 450 aa4.29□□□□□ -1.72
CPSF7-220ENST00000541963 SSX2Q16385 188 aa4.29□□□□□ -1.72
CPSF7-220ENST00000541963 TAF9Q16594 264 aa4.29□□□□□ -1.72
CPSF7-220ENST00000541963 ASPHD2Q6ICH7 369 aa4.29□□□□□ -1.72
CPSF7-220ENST00000541963 SLC35E4Q6ICL7 350 aa4.29□□□□□ -1.72
CPSF7-220ENST00000541963 OR4A47Q6IF82 309 aa4.29□□□□□ -1.72
CPSF7-220ENST00000541963 UQCC3Q6UW78 93 aa4.29□□□□□ -1.72
CPSF7-220ENST00000541963 UNQ9370/PRO34162Q6UXP9 181 aa4.29□□□□□ -1.72
CPSF7-220ENST00000541963 CEACAM19Q7Z692 300 aa4.29□□□□□ -1.72
CPSF7-220ENST00000541963 TMEM17Q86X19 198 aa4.29□□□□□ -1.72
CPSF7-220ENST00000541963 MMD2Q8IY49 270 aa4.29□□□□□ -1.72
CPSF7-220ENST00000541963 NHLRC2Q8NBF2 726 aa4.29□□□□□ -1.72
CPSF7-220ENST00000541963 SUMF2Q8NBJ7 301 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 174.2 ms