RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 FCGR2BP31994 310 aaPredicted RBP4.38□□□□□ -1.71
SNHG1-218ENST00000541615 NTF4P34130 210 aa4.38□□□□□ -1.71
SNHG1-218ENST00000541615 VDAC2P45880 294 aaPredicted RBP4.38□□□□□ -1.71
SNHG1-218ENST00000541615 RGRP47804 291 aa4.38□□□□□ -1.71
SNHG1-218ENST00000541615 SGSHP51688 502 aa4.38□□□□□ -1.71
SNHG1-218ENST00000541615 ZNF133P52736 654 aaPredicted RBP4.38□□□□□ -1.71
SNHG1-218ENST00000541615 LINC00310P59036 64 aa4.38□□□□□ -1.71
SNHG1-218ENST00000541615 HSPE1P61604 102 aaKnown RBP4.38□□□□□ -1.71
SNHG1-218ENST00000541615 SUPT4H1P63272 117 aaKnown RBP4.38□□□□□ -1.71
SNHG1-218ENST00000541615 CX3CL1P78423 397 aa4.38□□□□□ -1.71
SNHG1-218ENST00000541615 MRPS6P82932 125 aaKnown RBP4.38□□□□□ -1.71
SNHG1-218ENST00000541615 SP4Q02446 784 aa4.38□□□□□ -1.71
SNHG1-218ENST00000541615 ZNF77Q15935 545 aa4.38□□□□□ -1.71
SNHG1-218ENST00000541615 TIGITQ495A1 244 aa4.38□□□□□ -1.71
SNHG1-218ENST00000541615 C1orf100Q5SVJ3 147 aa4.38□□□□□ -1.71
SNHG1-218ENST00000541615 TEX36Q5VZQ5 186 aa4.38□□□□□ -1.71
SNHG1-218ENST00000541615 ZNF474Q6S9Z5 364 aaPredicted RBP4.38□□□□□ -1.71
SNHG1-218ENST00000541615 RPTNQ6XPR3 784 aa4.38□□□□□ -1.71
SNHG1-218ENST00000541615 FAM19A5Q7Z5A7 132 aaPredicted RBP4.38□□□□□ -1.71
SNHG1-218ENST00000541615 SPATA12Q7Z6I5 190 aa4.38□□□□□ -1.71
SNHG1-218ENST00000541615 LHFPL1Q86WI0 220 aa4.38□□□□□ -1.71
SNHG1-218ENST00000541615 ZDHHC23Q8IYP9 409 aa4.38□□□□□ -1.71
SNHG1-218ENST00000541615 NPWQ8N729 165 aa4.38□□□□□ -1.71
SNHG1-218ENST00000541615 ZNF645Q8N7E2 425 aa4.38□□□□□ -1.71
SNHG1-218ENST00000541615 TMEM178AQ8NBL3 297 aa4.38□□□□□ -1.71
SNHG1-218ENST00000541615 VN1R2Q8NFZ6 395 aa4.38□□□□□ -1.71
SNHG1-218ENST00000541615 TSKUQ8WUA8 353 aa4.38□□□□□ -1.71
SNHG1-218ENST00000541615 GTSF1Q8WW33 167 aa4.38□□□□□ -1.71
SNHG1-218ENST00000541615 SOCS4Q8WXH5 440 aa4.38□□□□□ -1.71
SNHG1-218ENST00000541615 UBE2E3Q969T4 207 aa4.38□□□□□ -1.71
SNHG1-218ENST00000541615 TMEM230Q96A57 120 aa4.38□□□□□ -1.71
SNHG1-218ENST00000541615 MSI2Q96DH6 328 aaKnown RBP4.38□□□□□ -1.71
SNHG1-218ENST00000541615 ADAT3Q96EY9 351 aaPredicted RBP4.38□□□□□ -1.71
SNHG1-218ENST00000541615 C20orf173Q96LM9 149 aa4.38□□□□□ -1.71
SNHG1-218ENST00000541615 RAB40CQ96S21 281 aa4.38□□□□□ -1.71
SNHG1-218ENST00000541615 MCHR1Q99705 422 aa4.38□□□□□ -1.71
SNHG1-218ENST00000541615 PDCD1LG2Q9BQ51 273 aa4.38□□□□□ -1.71
SNHG1-218ENST00000541615 CDIP1Q9H305 208 aa4.38□□□□□ -1.71
SNHG1-218ENST00000541615 GNB4Q9HAV0 340 aa4.38□□□□□ -1.71
SNHG1-218ENST00000541615 MBNL3Q9NUK0 354 aaKnown RBP4.38□□□□□ -1.71
SNHG1-218ENST00000541615 TDRD15B5MCY1 1934 aaKnown RBP4.38□□□□□ -1.71
SNHG1-218ENST00000541615 RLFQ13129 1914 aa4.38□□□□□ -1.71
SNHG1-218ENST00000541615 MYO18AQ92614 2054 aaKnown RBP4.37□□□□□ -1.71
SNHG1-218ENST00000541615 TEX50A0A1B0GTY4 177 aa4.37□□□□□ -1.71
SNHG1-218ENST00000541615 CRYM-AS1A6NIL9 109 aa4.37□□□□□ -1.71
SNHG1-218ENST00000541615 SNURFLB1AK76 121 aa4.37□□□□□ -1.71
SNHG1-218ENST00000541615 IGHV3-7P01780 117 aa4.37□□□□□ -1.71
SNHG1-218ENST00000541615 MT-ATP8P03928 68 aa4.37□□□□□ -1.71
SNHG1-218ENST00000541615 JMJD7P0C870 316 aa4.37□□□□□ -1.71
SNHG1-218ENST00000541615 NHLRC4P0CG21 123 aaPredicted RBP4.37□□□□□ -1.71
SNHG1-218ENST00000541615 FCGR2AP12318 317 aa4.37□□□□□ -1.71
SNHG1-218ENST00000541615 ZNF20P17024 532 aa4.37□□□□□ -1.71
SNHG1-218ENST00000541615 IGFBP4P22692 258 aa4.37□□□□□ -1.71
SNHG1-218ENST00000541615 PTGDSP41222 190 aa4.37□□□□□ -1.71
SNHG1-218ENST00000541615 TAS2R45P59539 299 aa4.37□□□□□ -1.71
SNHG1-218ENST00000541615 PSG4Q00888 419 aa4.37□□□□□ -1.71
SNHG1-218ENST00000541615 POU3F1Q03052 451 aaPredicted RBP4.37□□□□□ -1.71
SNHG1-218ENST00000541615 TAF10Q12962 218 aa4.37□□□□□ -1.71
SNHG1-218ENST00000541615 TBC1D28Q2M2D7 210 aa4.37□□□□□ -1.71
SNHG1-218ENST00000541615 CEACAM16Q2WEN9 425 aa4.37□□□□□ -1.71
SNHG1-218ENST00000541615 Q56UQ5 140 aa4.37□□□□□ -1.71
SNHG1-218ENST00000541615 LCE3BQ5TA77 95 aa4.37□□□□□ -1.71
SNHG1-218ENST00000541615 TMEM211Q6ICI0 200 aa4.37□□□□□ -1.71
SNHG1-218ENST00000541615 Q6ZS49 121 aa4.37□□□□□ -1.71
SNHG1-218ENST00000541615 SSX8Q7RTT4 187 aa4.37□□□□□ -1.71
SNHG1-218ENST00000541615 SUMF1Q8NBK3 374 aa4.37□□□□□ -1.71
SNHG1-218ENST00000541615 OR10G7Q8NGN6 311 aa4.37□□□□□ -1.71
SNHG1-218ENST00000541615 SNRNP40Q96DI7 357 aaKnown RBP4.37□□□□□ -1.71
SNHG1-218ENST00000541615 ORAI2Q96SN7 254 aa4.37□□□□□ -1.71
SNHG1-218ENST00000541615 MLST8Q9BVC4 326 aa4.37□□□□□ -1.71
SNHG1-218ENST00000541615 PRORYQ9H606 182 aa4.37□□□□□ -1.71
SNHG1-218ENST00000541615 KCNIP2Q9NS61 270 aa4.37□□□□□ -1.71
SNHG1-218ENST00000541615 HIGD1BQ9P298 99 aa4.37□□□□□ -1.71
SNHG1-218ENST00000541615 OR1A2Q9Y585 309 aa4.37□□□□□ -1.71
SNHG1-218ENST00000541615 ANKRD36A6QL64 1941 aa4.36□□□□□ -1.71
SNHG1-218ENST00000541615 A0A1B0GWB2 263 aa4.36□□□□□ -1.71
SNHG1-218ENST00000541615 PRSS37A4D1T9 235 aa4.36□□□□□ -1.71
SNHG1-218ENST00000541615 E9PLD3 99 aa4.36□□□□□ -1.71
SNHG1-218ENST00000541615 C11orf98E9PRG8 122 aa4.36□□□□□ -1.71
SNHG1-218ENST00000541615 CCDC179H3BU77 68 aa4.36□□□□□ -1.71
SNHG1-218ENST00000541615 CLDN5O00501 218 aa4.36□□□□□ -1.71
SNHG1-218ENST00000541615 TNFSF11O14788 317 aa4.36□□□□□ -1.71
SNHG1-218ENST00000541615 NPFFO15130 113 aa4.36□□□□□ -1.71
SNHG1-218ENST00000541615 EML2O95834 649 aa4.36□□□□□ -1.71
SNHG1-218ENST00000541615 TIMP1P01033 207 aa4.36□□□□□ -1.71
SNHG1-218ENST00000541615 AMY1AP04745 511 aa4.36□□□□□ -1.71
SNHG1-218ENST00000541615 SLC25A5P05141 298 aaKnown RBP4.36□□□□□ -1.71
SNHG1-218ENST00000541615 CA3P07451 260 aa4.36□□□□□ -1.71
SNHG1-218ENST00000541615 CELA3BP08861 270 aa4.36□□□□□ -1.71
SNHG1-218ENST00000541615 ZNF688P0C7X2 276 aa4.36□□□□□ -1.71
SNHG1-218ENST00000541615 CYBAP13498 195 aa4.36□□□□□ -1.71
SNHG1-218ENST00000541615 BLVRBP30043 206 aaPredicted RBP4.36□□□□□ -1.71
SNHG1-218ENST00000541615 PEBP1P30086 187 aaKnown RBP4.36□□□□□ -1.71
SNHG1-218ENST00000541615 PPIFP30405 207 aaKnown RBP4.36□□□□□ -1.71
SNHG1-218ENST00000541615 EFNB2P52799 333 aa4.36□□□□□ -1.71
SNHG1-218ENST00000541615 RPL31P62899 125 aaKnown RBP4.36□□□□□ -1.71
SNHG1-218ENST00000541615 HBG1P69891 147 aa4.36□□□□□ -1.71
SNHG1-218ENST00000541615 HBG2P69892 147 aa4.36□□□□□ -1.71
SNHG1-218ENST00000541615 CXCL9Q07325 125 aa4.36□□□□□ -1.71
SNHG1-218ENST00000541615 EIF3IQ13347 325 aaKnown RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms