RNA–Protein interactions for RNA: ENST00000541416.5

SNHG1-216, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 996 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-216ENST00000541416 ARL3P36405 182 aa9.19□□□□□ -0.94
SNHG1-216ENST00000541416 ZNF45Q02386 682 aa9.19□□□□□ -0.94
SNHG1-216ENST00000541416 INSL4Q14641 139 aa9.19□□□□□ -0.94
SNHG1-216ENST00000541416 P2RY14Q15391 338 aa9.19□□□□□ -0.94
SNHG1-216ENST00000541416 RAB11BQ15907 218 aa9.19□□□□□ -0.94
SNHG1-216ENST00000541416 IDO2Q6ZQW0 420 aa9.19□□□□□ -0.94
SNHG1-216ENST00000541416 RBPMS2Q6ZRY4 209 aaKnown RBP9.19□□□□□ -0.94
SNHG1-216ENST00000541416 Q6ZWC4 215 aa9.19□□□□□ -0.94
SNHG1-216ENST00000541416 SLC38A6Q8IZM9 456 aa9.19□□□□□ -0.94
SNHG1-216ENST00000541416 C8orf59Q8N0T1 100 aaPredicted RBP9.19□□□□□ -0.94
SNHG1-216ENST00000541416 TMEM61Q8N0U2 210 aa9.19□□□□□ -0.94
SNHG1-216ENST00000541416 VSTM2AQ8TAG5 236 aa9.19□□□□□ -0.94
SNHG1-216ENST00000541416 MARC2Q969Z3 335 aa9.19□□□□□ -0.94
SNHG1-216ENST00000541416 CABLES2Q9BTV7 478 aa9.19□□□□□ -0.94
SNHG1-216ENST00000541416 ZNF430Q9H8G1 570 aaPredicted RBP9.19□□□□□ -0.94
SNHG1-216ENST00000541416 PSORS1C1Q9UIG5 152 aa9.19□□□□□ -0.94
SNHG1-216ENST00000541416 MRPS7Q9Y2R9 242 aaKnown RBP9.19□□□□□ -0.94
SNHG1-216ENST00000541416 PRELID3BQ9Y3B1 194 aa9.19□□□□□ -0.94
SNHG1-216ENST00000541416 TRAV25A0A0B4J276 109 aa9.18□□□□□ -0.94
SNHG1-216ENST00000541416 UBE2CO00762 179 aa9.18□□□□□ -0.94
SNHG1-216ENST00000541416 SPRY2O43597 315 aa9.18□□□□□ -0.94
SNHG1-216ENST00000541416 ARL6IP5O75915 188 aa9.18□□□□□ -0.94
SNHG1-216ENST00000541416 CDK1P06493 297 aa9.18□□□□□ -0.94
SNHG1-216ENST00000541416 UCHL1P09936 223 aa9.18□□□□□ -0.94
SNHG1-216ENST00000541416 CD37P11049 281 aa9.18□□□□□ -0.94
SNHG1-216ENST00000541416 TMEM50BP56557 158 aa9.18□□□□□ -0.94
SNHG1-216ENST00000541416 SSX1Q16384 188 aa9.18□□□□□ -0.94
SNHG1-216ENST00000541416 IGSF11Q5DX21 431 aa9.18□□□□□ -0.94
SNHG1-216ENST00000541416 LYG2Q86SG7 212 aa9.18□□□□□ -0.94
SNHG1-216ENST00000541416 OR1L6Q8NGR2 347 aa9.18□□□□□ -0.94
SNHG1-216ENST00000541416 EEF1AKMT3Q96AZ1 226 aa9.18□□□□□ -0.94
SNHG1-216ENST00000541416 PLCXD1Q9NUJ7 323 aa9.18□□□□□ -0.94
SNHG1-216ENST00000541416 FBXL7Q9UJT9 491 aa9.18□□□□□ -0.94
SNHG1-216ENST00000541416 PCLOQ9Y6V0 5065 aa9.18□□□□□ -0.94
SNHG1-216ENST00000541416 DNAH10Q8IVF4 4471 aa9.17□□□□□ -0.94
SNHG1-216ENST00000541416 KMT2AQ03164 3969 aa9.17□□□□□ -0.94
SNHG1-216ENST00000541416 NPIPB5A8MRT5 1133 aa9.17□□□□□ -0.94
SNHG1-216ENST00000541416 FOXI3A8MTJ6 420 aaPredicted RBP9.17□□□□□ -0.94
SNHG1-216ENST00000541416 A8MWP6 167 aa9.17□□□□□ -0.94
SNHG1-216ENST00000541416 DENRO43583 198 aaKnown RBP9.17□□□□□ -0.94
SNHG1-216ENST00000541416 SCAF4O95104 1147 aaKnown RBP9.17□□□□□ -0.94
SNHG1-216ENST00000541416 HLA-AP01891 365 aaKnown RBP9.17□□□□□ -0.94
SNHG1-216ENST00000541416 SAA1P0DJI8 122 aaPredicted RBP9.17□□□□□ -0.94
SNHG1-216ENST00000541416 HIST1H1BP16401 226 aaKnown RBP9.17□□□□□ -0.94
SNHG1-216ENST00000541416 CD36P16671 472 aa9.17□□□□□ -0.94
SNHG1-216ENST00000541416 GADD45AP24522 165 aa9.17□□□□□ -0.94
SNHG1-216ENST00000541416 DUTP33316 252 aaKnown RBP9.17□□□□□ -0.94
SNHG1-216ENST00000541416 PSMD7P51665 324 aa9.17□□□□□ -0.94
SNHG1-216ENST00000541416 MRGPRG-AS1Q2M3A8 158 aa9.17□□□□□ -0.94
SNHG1-216ENST00000541416 TM4SF20Q53R12 229 aa9.17□□□□□ -0.94
SNHG1-216ENST00000541416 PACRGLQ8N7B6 248 aa9.17□□□□□ -0.94
SNHG1-216ENST00000541416 UXS1Q8NBZ7 420 aa9.17□□□□□ -0.94
SNHG1-216ENST00000541416 BPIFB6Q8NFQ5 453 aa9.17□□□□□ -0.94
SNHG1-216ENST00000541416 CACNG8Q8WXS5 425 aa9.17□□□□□ -0.94
SNHG1-216ENST00000541416 RAB3CQ96E17 227 aa9.17□□□□□ -0.94
SNHG1-216ENST00000541416 TMEM213A2RRL7 107 aa9.16□□□□□ -0.94
SNHG1-216ENST00000541416 FCGR3BO75015 233 aa9.16□□□□□ -0.94
SNHG1-216ENST00000541416 SLC22A5O76082 557 aa9.16□□□□□ -0.94
SNHG1-216ENST00000541416 FCGR3AP08637 254 aa9.16□□□□□ -0.94
SNHG1-216ENST00000541416 DEFA4P12838 97 aa9.16□□□□□ -0.94
SNHG1-216ENST00000541416 MYOD1P15172 320 aa9.16□□□□□ -0.94
SNHG1-216ENST00000541416 MAS1LP35410 378 aa9.16□□□□□ -0.94
SNHG1-216ENST00000541416 TALDO1P37837 337 aa9.16□□□□□ -0.94
SNHG1-216ENST00000541416 SPHARQ15513 63 aa9.16□□□□□ -0.94
SNHG1-216ENST00000541416 MED22Q15528 200 aa9.16□□□□□ -0.94
SNHG1-216ENST00000541416 TRAM1Q15629 374 aa9.16□□□□□ -0.94
SNHG1-216ENST00000541416 PLAC9Q5JTB6 97 aa9.16□□□□□ -0.94
SNHG1-216ENST00000541416 LGALS9CQ6DKI2 356 aa9.16□□□□□ -0.94
SNHG1-216ENST00000541416 CLEC19AQ6UXS0 136 aa9.16□□□□□ -0.94
SNHG1-216ENST00000541416 OR2C3Q8N628 320 aa9.16□□□□□ -0.94
SNHG1-216ENST00000541416 STPG3Q8N7X2 389 aa9.16□□□□□ -0.94
SNHG1-216ENST00000541416 UFD1Q92890 307 aa9.16□□□□□ -0.94
SNHG1-216ENST00000541416 FAM3DQ96BQ1 224 aa9.16□□□□□ -0.94
SNHG1-216ENST00000541416 CXorf58Q96LI9 332 aa9.16□□□□□ -0.94
SNHG1-216ENST00000541416 OR51E2Q9H255 320 aa9.16□□□□□ -0.94
SNHG1-216ENST00000541416 MLXQ9UH92 298 aa9.16□□□□□ -0.94
SNHG1-216ENST00000541416 RAB22AQ9UL26 194 aa9.16□□□□□ -0.94
SNHG1-216ENST00000541416 TRBV7-1A0A0A6YYK4 115 aa9.15□□□□□ -0.94
SNHG1-216ENST00000541416 KIR2DL5BA0A0G2JN68 375 aa9.15□□□□□ -0.94
SNHG1-216ENST00000541416 KIR2DL5BA0A0G2JPC4 375 aa9.15□□□□□ -0.94
SNHG1-216ENST00000541416 LINC00473A8K010 186 aa9.15□□□□□ -0.94
SNHG1-216ENST00000541416 GALP22466 123 aa9.15□□□□□ -0.94
SNHG1-216ENST00000541416 PSMA1P25786 263 aaKnown RBP9.15□□□□□ -0.94
SNHG1-216ENST00000541416 RPL27AP46776 148 aaKnown RBP9.15□□□□□ -0.94
SNHG1-216ENST00000541416 ARFRP1Q13795 201 aa9.15□□□□□ -0.94
SNHG1-216ENST00000541416 C2orf76Q3KRA6 126 aa9.15□□□□□ -0.94
SNHG1-216ENST00000541416 BTNL8Q6UX41 500 aa9.15□□□□□ -0.94
SNHG1-216ENST00000541416 KCTD9Q7L273 389 aa9.15□□□□□ -0.94
SNHG1-216ENST00000541416 KIR2DL5AQ8N109 375 aa9.15□□□□□ -0.94
SNHG1-216ENST00000541416 KIR2DL5BQ8NHK3 375 aa9.15□□□□□ -0.94
SNHG1-216ENST00000541416 FYTTD1Q96QD9 318 aaKnown RBP9.15□□□□□ -0.94
SNHG1-216ENST00000541416 SPAG8Q99932 426 aaPredicted RBP9.15□□□□□ -0.94
SNHG1-216ENST00000541416 SLC2A9Q9NRM0 540 aa9.15□□□□□ -0.94
SNHG1-216ENST00000541416 MRPL27Q9P0M9 148 aaKnown RBP9.15□□□□□ -0.94
SNHG1-216ENST00000541416 UFC1Q9Y3C8 167 aa9.15□□□□□ -0.94
SNHG1-216ENST00000541416 AK6Q9Y3D8 172 aaKnown RBP9.15□□□□□ -0.94
SNHG1-216ENST00000541416 DMRT1Q9Y5R6 373 aa9.15□□□□□ -0.94
SNHG1-216ENST00000541416 HMX3A6NHT5 357 aa9.14□□□□□ -0.95
SNHG1-216ENST00000541416 CTXN2P0C2S0 81 aa9.14□□□□□ -0.95
SNHG1-216ENST00000541416 EDN2P20800 178 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms