RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 RBM7Q9Y580 266 aaKnown RBP14.27□□□□□ -0.13
SPIDR-227ENST00000541342 PMS2P5A8MQ11 134 aa14.26□□□□□ -0.13
SPIDR-227ENST00000541342 SH2D1BO14796 132 aa14.26□□□□□ -0.13
SPIDR-227ENST00000541342 IGHV3-13P01766 116 aa14.26□□□□□ -0.13
SPIDR-227ENST00000541342 AMBPP02760 352 aa14.26□□□□□ -0.13
SPIDR-227ENST00000541342 RPL30P62888 115 aaKnown RBP14.26□□□□□ -0.13
SPIDR-227ENST00000541342 RPUSD4Q96CM3 377 aaKnown RBP14.26□□□□□ -0.13
SPIDR-227ENST00000541342 TIMM9Q9Y5J7 89 aa14.26□□□□□ -0.13
SPIDR-227ENST00000541342 PSPNO60542 156 aa14.26□□□□□ -0.13
SPIDR-227ENST00000541342 CLDN1O95832 211 aa14.26□□□□□ -0.13
SPIDR-227ENST00000541342 DDTP30046 118 aa14.26□□□□□ -0.13
SPIDR-227ENST00000541342 EIF4EBP1Q13541 118 aaPredicted RBP14.26□□□□□ -0.13
SPIDR-227ENST00000541342 TMEM241Q24JQ0 296 aa14.26□□□□□ -0.13
SPIDR-227ENST00000541342 ACP7Q6ZNF0 438 aa14.26□□□□□ -0.13
SPIDR-227ENST00000541342 WIPI2Q9Y4P8 454 aa14.26□□□□□ -0.13
SPIDR-227ENST00000541342 FAM90A26D6RGX4 464 aa14.26□□□□□ -0.13
SPIDR-227ENST00000541342 DEFA4P12838 97 aa14.26□□□□□ -0.13
SPIDR-227ENST00000541342 GAB2Q9UQC2 676 aa14.26□□□□□ -0.13
SPIDR-227ENST00000541342 IFNA1P01562 189 aa14.25□□□□□ -0.13
SPIDR-227ENST00000541342 CD40P25942 277 aa14.25□□□□□ -0.13
SPIDR-227ENST00000541342 G6PCP35575 357 aa14.25□□□□□ -0.13
SPIDR-227ENST00000541342 PKIAP61925 76 aa14.25□□□□□ -0.13
SPIDR-227ENST00000541342 PARLQ9H300 379 aa14.25□□□□□ -0.13
SPIDR-227ENST00000541342 CLN8Q9UBY8 286 aa14.25□□□□□ -0.13
SPIDR-227ENST00000541342 GZMBP10144 247 aa14.25□□□□□ -0.13
SPIDR-227ENST00000541342 BSXQ3C1V8 233 aa14.25□□□□□ -0.13
SPIDR-227ENST00000541342 OR5R1Q8NH85 324 aa14.25□□□□□ -0.13
SPIDR-227ENST00000541342 ELOVL5Q9NYP7 299 aa14.25□□□□□ -0.13
SPIDR-227ENST00000541342 C16orf97H3BN30 126 aa14.25□□□□□ -0.13
SPIDR-227ENST00000541342 KLF3P57682 345 aaPredicted RBP14.25□□□□□ -0.13
SPIDR-227ENST00000541342 LAMP3Q9UQV4 416 aa14.25□□□□□ -0.13
SPIDR-227ENST00000541342 IGLV3-9A0A075B6K5 115 aa14.24□□□□□ -0.13
SPIDR-227ENST00000541342 KRASP01116 189 aa14.24□□□□□ -0.13
SPIDR-227ENST00000541342 TFF3Q07654 80 aa14.24□□□□□ -0.13
SPIDR-227ENST00000541342 MEGF10Q96KG7 1140 aa14.24□□□□□ -0.13
SPIDR-227ENST00000541342 PLCE1Q9P212 2302 aa14.24□□□□□ -0.13
SPIDR-227ENST00000541342 SMCO3A2RU48 225 aa14.24□□□□□ -0.13
SPIDR-227ENST00000541342 PRSS8Q16651 343 aa14.24□□□□□ -0.13
SPIDR-227ENST00000541342 OR1L1Q8NH94 360 aa14.24□□□□□ -0.13
SPIDR-227ENST00000541342 RNASEH2CQ8TDP1 164 aaKnown RBP14.24□□□□□ -0.13
SPIDR-227ENST00000541342 ODAMA1E959 279 aa14.23□□□□□ -0.13
SPIDR-227ENST00000541342 TMEM250H0YL14 139 aa14.23□□□□□ -0.13
SPIDR-227ENST00000541342 THBDP07204 575 aa14.23□□□□□ -0.13
SPIDR-227ENST00000541342 RPS16P62249 146 aaKnown RBP14.23□□□□□ -0.13
SPIDR-227ENST00000541342 CLEC12BQ2HXU8 276 aa14.23□□□□□ -0.13
SPIDR-227ENST00000541342 OR1P1Q8NH06 330 aa14.23□□□□□ -0.13
SPIDR-227ENST00000541342 ZDHHC16Q969W1 377 aa14.23□□□□□ -0.13
SPIDR-227ENST00000541342 MRPL37Q9BZE1 423 aaKnown RBP14.23□□□□□ -0.13
SPIDR-227ENST00000541342 METRNQ9UJH8 293 aa14.23□□□□□ -0.13
SPIDR-227ENST00000541342 JOSD1Q15040 202 aaPredicted RBP14.23□□□□□ -0.13
SPIDR-227ENST00000541342 COA6Q5JTJ3 125 aaKnown RBP14.23□□□□□ -0.13
SPIDR-227ENST00000541342 FIP1L1Q6UN15 594 aaKnown RBP14.23□□□□□ -0.13
SPIDR-227ENST00000541342 REC114Q7Z4M0 266 aa14.23□□□□□ -0.13
SPIDR-227ENST00000541342 PCGF1Q9BSM1 259 aa14.23□□□□□ -0.13
SPIDR-227ENST00000541342 A0A1B0GV90 55 aa14.23□□□□□ -0.13
SPIDR-227ENST00000541342 EGR1P18146 543 aa14.23□□□□□ -0.13
SPIDR-227ENST00000541342 GALR1P47211 349 aa14.23□□□□□ -0.13
SPIDR-227ENST00000541342 ZNF816Q0VGE8 651 aaPredicted RBP14.23□□□□□ -0.13
SPIDR-227ENST00000541342 ZNF645Q8N7E2 425 aa14.23□□□□□ -0.13
SPIDR-227ENST00000541342 LRRC29Q8WV35 223 aa14.23□□□□□ -0.13
SPIDR-227ENST00000541342 OR2D2Q9H210 308 aa14.23□□□□□ -0.13
SPIDR-227ENST00000541342 CHD8Q9HCK8 2581 aa14.22□□□□□ -0.13
SPIDR-227ENST00000541342 A0A087X0M5 115 aa14.22□□□□□ -0.13
SPIDR-227ENST00000541342 CTXND1A0A1B0GTU2 59 aa14.22□□□□□ -0.13
SPIDR-227ENST00000541342 A0A1B0GX30 115 aa14.22□□□□□ -0.13
SPIDR-227ENST00000541342 LRRC30A6NM36 301 aa14.22□□□□□ -0.13
SPIDR-227ENST00000541342 S1PR2O95136 353 aa14.22□□□□□ -0.13
SPIDR-227ENST00000541342 NPPCP23582 126 aa14.22□□□□□ -0.13
SPIDR-227ENST00000541342 OR10G9Q8NGN4 311 aa14.22□□□□□ -0.13
SPIDR-227ENST00000541342 OR10G7Q8NGN6 311 aa14.22□□□□□ -0.13
SPIDR-227ENST00000541342 OR2V2Q96R30 315 aa14.22□□□□□ -0.13
SPIDR-227ENST00000541342 ICE1Q9Y2F5 2266 aa14.22□□□□□ -0.13
SPIDR-227ENST00000541342 ZG16O60844 167 aa14.22□□□□□ -0.13
SPIDR-227ENST00000541342 LINC00205P59089 165 aa14.22□□□□□ -0.13
SPIDR-227ENST00000541342 RBPJQ06330 500 aa14.22□□□□□ -0.13
SPIDR-227ENST00000541342 WFDC8Q8IUA0 241 aa14.22□□□□□ -0.13
SPIDR-227ENST00000541342 TGIF2LYQ8IUE0 185 aa14.22□□□□□ -0.13
SPIDR-227ENST00000541342 Q8N7P7 452 aa14.22□□□□□ -0.13
SPIDR-227ENST00000541342 DLL1O00548 723 aa14.21□□□□□ -0.13
SPIDR-227ENST00000541342 C1QTNF9P0C862 333 aa14.21□□□□□ -0.13
SPIDR-227ENST00000541342 PSMB3P49720 205 aa14.21□□□□□ -0.13
SPIDR-227ENST00000541342 ZNF808Q8N4W9 903 aaPredicted RBP14.21□□□□□ -0.13
SPIDR-227ENST00000541342 OR4F5Q8NH21 305 aa14.21□□□□□ -0.13
SPIDR-227ENST00000541342 OR4F4Q96R69 305 aa14.21□□□□□ -0.13
SPIDR-227ENST00000541342 NPCDR1Q9BY65 106 aa14.21□□□□□ -0.13
SPIDR-227ENST00000541342 C17orf98A8MV24 154 aa14.21□□□□□ -0.13
SPIDR-227ENST00000541342 C12orf77C9JDV5 145 aa14.21□□□□□ -0.13
SPIDR-227ENST00000541342 H7BYZ3 331 aa14.21□□□□□ -0.13
SPIDR-227ENST00000541342 DVL1O14640 695 aa14.21□□□□□ -0.13
SPIDR-227ENST00000541342 SPRY3O43610 288 aa14.21□□□□□ -0.13
SPIDR-227ENST00000541342 FGF7P21781 194 aa14.21□□□□□ -0.13
SPIDR-227ENST00000541342 OR52L2PQ8NGH6 319 aa14.21□□□□□ -0.13
SPIDR-227ENST00000541342 PRR7Q8TB68 274 aa14.21□□□□□ -0.13
SPIDR-227ENST00000541342 RAB24Q969Q5 203 aa14.21□□□□□ -0.13
SPIDR-227ENST00000541342 TMEM147Q9BVK8 224 aa14.21□□□□□ -0.13
SPIDR-227ENST00000541342 XKRY2A2RUG3 117 aa14.21□□□□□ -0.14
SPIDR-227ENST00000541342 MZT1Q08AG7 82 aa14.21□□□□□ -0.14
SPIDR-227ENST00000541342 FFAR4Q5NUL3 377 aa14.21□□□□□ -0.14
SPIDR-227ENST00000541342 CD177Q8N6Q3 437 aa14.21□□□□□ -0.14
SPIDR-227ENST00000541342 RND1Q92730 232 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms