RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 Q9UFV3 132 aa12.02□□□□□ -0.48
SFSWAP-210ENST00000541286 DOPEY1Q5JWR5 2465 aa12.02□□□□□ -0.48
SFSWAP-210ENST00000541286 TFF1P04155 84 aa12.02□□□□□ -0.49
SFSWAP-210ENST00000541286 CELA3BP08861 270 aa12.02□□□□□ -0.49
SFSWAP-210ENST00000541286 FAM27E3Q08E93 113 aa12.02□□□□□ -0.49
SFSWAP-210ENST00000541286 NMSQ5H8A3 153 aa12.02□□□□□ -0.49
SFSWAP-210ENST00000541286 FAM78BQ5VT40 261 aa12.02□□□□□ -0.49
SFSWAP-210ENST00000541286 DPPA3Q6W0C5 159 aa12.02□□□□□ -0.49
SFSWAP-210ENST00000541286 IMMP2LQ96T52 175 aa12.02□□□□□ -0.49
SFSWAP-210ENST00000541286 UBR5O95071 2799 aaPredicted RBP12.02□□□□□ -0.49
SFSWAP-210ENST00000541286 CLDN1O95832 211 aa12.01□□□□□ -0.49
SFSWAP-210ENST00000541286 UCP1P25874 307 aa12.01□□□□□ -0.49
SFSWAP-210ENST00000541286 CEACAM6P40199 344 aa12.01□□□□□ -0.49
SFSWAP-210ENST00000541286 CD81P60033 236 aa12.01□□□□□ -0.49
SFSWAP-210ENST00000541286 ID3Q02535 119 aa12.01□□□□□ -0.49
SFSWAP-210ENST00000541286 LTC4SQ16873 150 aa12.01□□□□□ -0.49
SFSWAP-210ENST00000541286 BSXQ3C1V8 233 aa12.01□□□□□ -0.49
SFSWAP-210ENST00000541286 RCC1LQ96I51 464 aaKnown RBP12.01□□□□□ -0.49
SFSWAP-210ENST00000541286 UBE2L5PA0A1B0GUS4 154 aa12.01□□□□□ -0.49
SFSWAP-210ENST00000541286 ZNF320A2RRD8 509 aa12.01□□□□□ -0.49
SFSWAP-210ENST00000541286 ZNF737O75373 536 aa12.01□□□□□ -0.49
SFSWAP-210ENST00000541286 NAPSAO96009 420 aa12.01□□□□□ -0.49
SFSWAP-210ENST00000541286 KRASP01116 189 aa12.01□□□□□ -0.49
SFSWAP-210ENST00000541286 CDKN1AP38936 164 aa12.01□□□□□ -0.49
SFSWAP-210ENST00000541286 MMDQ15546 238 aa12.01□□□□□ -0.49
SFSWAP-210ENST00000541286 OR4F5Q8NH21 305 aa12.01□□□□□ -0.49
SFSWAP-210ENST00000541286 FAM57AQ8TBR7 257 aa12.01□□□□□ -0.49
SFSWAP-210ENST00000541286 STARD4Q96DR4 205 aa12.01□□□□□ -0.49
SFSWAP-210ENST00000541286 OR4F4Q96R69 305 aa12.01□□□□□ -0.49
SFSWAP-210ENST00000541286 SLC25A22Q9H936 323 aa12.01□□□□□ -0.49
SFSWAP-210ENST00000541286 OR2W1Q9Y3N9 320 aa12.01□□□□□ -0.49
SFSWAP-210ENST00000541286 TRBV24-1A0A075B6N3 115 aa12.01□□□□□ -0.49
SFSWAP-210ENST00000541286 A0A1B0GW64 132 aa12.01□□□□□ -0.49
SFSWAP-210ENST00000541286 DNPH1O43598 174 aa12.01□□□□□ -0.49
SFSWAP-210ENST00000541286 CRYAAP02489 173 aa12.01□□□□□ -0.49
SFSWAP-210ENST00000541286 PFN1P07737 140 aaKnown RBP12.01□□□□□ -0.49
SFSWAP-210ENST00000541286 PAX9P55771 341 aa12.01□□□□□ -0.49
SFSWAP-210ENST00000541286 PLPPR1Q8TBJ4 325 aa12.01□□□□□ -0.49
SFSWAP-210ENST00000541286 MRPL30Q8TCC3 161 aaKnown RBP12.01□□□□□ -0.49
SFSWAP-210ENST00000541286 RNF24Q9Y225 148 aa12.01□□□□□ -0.49
SFSWAP-210ENST00000541286 TRAV24A0A0B4J272 114 aa12□□□□□ -0.49
SFSWAP-210ENST00000541286 PRRG2O14669 202 aa12□□□□□ -0.49
SFSWAP-210ENST00000541286 TAS2R30P59541 319 aa12□□□□□ -0.49
SFSWAP-210ENST00000541286 TMEM241Q24JQ0 296 aa12□□□□□ -0.49
SFSWAP-210ENST00000541286 OR51G1Q8NGK1 321 aa12□□□□□ -0.49
SFSWAP-210ENST00000541286 LHX4Q969G2 390 aa12□□□□□ -0.49
SFSWAP-210ENST00000541286 RBMXL1Q96E39 390 aaKnown RBP12□□□□□ -0.49
SFSWAP-210ENST00000541286 CELSR1Q9NYQ6 3014 aa12□□□□□ -0.49
SFSWAP-210ENST00000541286 CDIPTO14735 213 aa12□□□□□ -0.49
SFSWAP-210ENST00000541286 COL8A2P25067 703 aa12□□□□□ -0.49
SFSWAP-210ENST00000541286 RND2P52198 227 aa12□□□□□ -0.49
SFSWAP-210ENST00000541286 ARL16Q0P5N6 197 aa12□□□□□ -0.49
SFSWAP-210ENST00000541286 ZNF816Q0VGE8 651 aaPredicted RBP12□□□□□ -0.49
SFSWAP-210ENST00000541286 FAM214BQ7L5A3 538 aa12□□□□□ -0.49
SFSWAP-210ENST00000541286 OR10V1Q8NGI7 309 aa12□□□□□ -0.49
SFSWAP-210ENST00000541286 RNASEH2CQ8TDP1 164 aaKnown RBP12□□□□□ -0.49
SFSWAP-210ENST00000541286 PPP1R14DQ9NXH3 145 aa12□□□□□ -0.49
SFSWAP-210ENST00000541286 NOTCH2Q04721 2471 aa12□□□□□ -0.49
SFSWAP-210ENST00000541286 FAM90A27PA6NNH2 459 aa11.99□□□□□ -0.49
SFSWAP-210ENST00000541286 IGHV1-2P23083 117 aa11.99□□□□□ -0.49
SFSWAP-210ENST00000541286 BRS3P32247 399 aa11.99□□□□□ -0.49
SFSWAP-210ENST00000541286 ZNF474Q6S9Z5 364 aaPredicted RBP11.99□□□□□ -0.49
SFSWAP-210ENST00000541286 CCL21O00585 134 aa11.99□□□□□ -0.49
SFSWAP-210ENST00000541286 SYNGR2O43760 224 aa11.99□□□□□ -0.49
SFSWAP-210ENST00000541286 SPINK4O60575 86 aa11.99□□□□□ -0.49
SFSWAP-210ENST00000541286 NXPH2O95156 264 aa11.99□□□□□ -0.49
SFSWAP-210ENST00000541286 UBE2G2P60604 165 aa11.99□□□□□ -0.49
SFSWAP-210ENST00000541286 RPL23P62829 140 aaKnown RBP11.99□□□□□ -0.49
SFSWAP-210ENST00000541286 C1orf185Q5T7R7 199 aa11.99□□□□□ -0.49
SFSWAP-210ENST00000541286 SMDT1Q9H4I9 107 aa11.99□□□□□ -0.49
SFSWAP-210ENST00000541286 VAX2Q9UIW0 290 aa11.99□□□□□ -0.49
SFSWAP-210ENST00000541286 H0Y980 276 aa11.99□□□□□ -0.49
SFSWAP-210ENST00000541286 C1orf194Q5T5A4 169 aa11.99□□□□□ -0.49
SFSWAP-210ENST00000541286 TPRX1Q8N7U7 411 aa11.99□□□□□ -0.49
SFSWAP-210ENST00000541286 R3HDM4Q96D70 268 aa11.99□□□□□ -0.49
SFSWAP-210ENST00000541286 TECTBQ96PL2 329 aa11.99□□□□□ -0.49
SFSWAP-210ENST00000541286 TRAPPC1Q9Y5R8 145 aa11.99□□□□□ -0.49
SFSWAP-210ENST00000541286 MAP1LC3B2A6NCE7 125 aa11.98□□□□□ -0.49
SFSWAP-210ENST00000541286 B4DEV8 164 aa11.98□□□□□ -0.49
SFSWAP-210ENST00000541286 HBE1P02100 147 aa11.98□□□□□ -0.49
SFSWAP-210ENST00000541286 CNN1P51911 297 aaKnown RBP11.98□□□□□ -0.49
SFSWAP-210ENST00000541286 GNG3P63215 75 aa11.98□□□□□ -0.49
SFSWAP-210ENST00000541286 IL24Q13007 206 aa11.98□□□□□ -0.49
SFSWAP-210ENST00000541286 OR5D13Q8NGL4 314 aa11.98□□□□□ -0.49
SFSWAP-210ENST00000541286 OR2T10Q8NGZ9 312 aa11.98□□□□□ -0.49
SFSWAP-210ENST00000541286 SPSB4Q96A44 273 aa11.98□□□□□ -0.49
SFSWAP-210ENST00000541286 OR2J1Q9GZK6 312 aa11.98□□□□□ -0.49
SFSWAP-210ENST00000541286 MAP1LC3BQ9GZQ8 125 aa11.98□□□□□ -0.49
SFSWAP-210ENST00000541286 SELENOKQ9Y6D0 94 aa11.98□□□□□ -0.49
SFSWAP-210ENST00000541286 PRSS47A8MTI9 375 aa11.98□□□□□ -0.49
SFSWAP-210ENST00000541286 IGHV3-13P01766 116 aa11.98□□□□□ -0.49
SFSWAP-210ENST00000541286 IGHV3-7P01780 117 aa11.98□□□□□ -0.49
SFSWAP-210ENST00000541286 CTXN2P0C2S0 81 aa11.98□□□□□ -0.49
SFSWAP-210ENST00000541286 ALKBH6Q3KRA9 238 aa11.98□□□□□ -0.49
SFSWAP-210ENST00000541286 TMEM41BQ5BJD5 291 aa11.98□□□□□ -0.49
SFSWAP-210ENST00000541286 ZNF573Q86YE8 665 aa11.98□□□□□ -0.49
SFSWAP-210ENST00000541286 SLC39A9Q9NUM3 307 aa11.98□□□□□ -0.49
SFSWAP-210ENST00000541286 FZR1Q9UM11 496 aa11.98□□□□□ -0.49
SFSWAP-210ENST00000541286 FBN2P35556 2912 aa11.98□□□□□ -0.49
SFSWAP-210ENST00000541286 F2Z2F3 143 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms