RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 ERVK11-1P61568 191 aa8.63□□□□□ -1.03
CDC42SE1-207ENST00000540998 NUTF2P61970 127 aaKnown RBP8.63□□□□□ -1.03
CDC42SE1-207ENST00000540998 PPP1CBP62140 327 aa8.63□□□□□ -1.03
CDC42SE1-207ENST00000540998 OR5I1Q13606 314 aa8.63□□□□□ -1.03
CDC42SE1-207ENST00000540998 C6orf15Q6UXA7 325 aaPredicted RBP8.63□□□□□ -1.03
CDC42SE1-207ENST00000540998 ZNF705AQ6ZN79 300 aaPredicted RBP8.63□□□□□ -1.03
CDC42SE1-207ENST00000540998 Q8TCH9 128 aa8.63□□□□□ -1.03
CDC42SE1-207ENST00000540998 TBX15Q96SF7 602 aa8.63□□□□□ -1.03
CDC42SE1-207ENST00000540998 FAM173AQ9BQD7 235 aa8.63□□□□□ -1.03
CDC42SE1-207ENST00000540998 RTL8AQ9BWD3 113 aa8.63□□□□□ -1.03
CDC42SE1-207ENST00000540998 LINC00470Q9BZP3 86 aa8.63□□□□□ -1.03
CDC42SE1-207ENST00000540998 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.63□□□□□ -1.03
CDC42SE1-207ENST00000540998 MBNL3Q9NUK0 354 aaKnown RBP8.63□□□□□ -1.03
CDC42SE1-207ENST00000540998 YLPM1P49750 1951 aaKnown RBP8.63□□□□□ -1.03
CDC42SE1-207ENST00000540998 SH2D1BO14796 132 aa8.63□□□□□ -1.03
CDC42SE1-207ENST00000540998 MLNRO43193 412 aa8.63□□□□□ -1.03
CDC42SE1-207ENST00000540998 SMPD2O60906 423 aa8.63□□□□□ -1.03
CDC42SE1-207ENST00000540998 PROP1O75360 226 aa8.63□□□□□ -1.03
CDC42SE1-207ENST00000540998 WNT2P09544 360 aa8.63□□□□□ -1.03
CDC42SE1-207ENST00000540998 P0C879 139 aa8.63□□□□□ -1.03
CDC42SE1-207ENST00000540998 LINC00310P59036 64 aa8.63□□□□□ -1.03
CDC42SE1-207ENST00000540998 RPL39P5Q59GN2 51 aa8.63□□□□□ -1.03
CDC42SE1-207ENST00000540998 PAM16Q9Y3D7 125 aa8.63□□□□□ -1.03
CDC42SE1-207ENST00000540998 FABP6P51161 128 aa8.63□□□□□ -1.03
CDC42SE1-207ENST00000540998 ARG2P78540 354 aa8.63□□□□□ -1.03
CDC42SE1-207ENST00000540998 COA6Q5JTJ3 125 aaKnown RBP8.63□□□□□ -1.03
CDC42SE1-207ENST00000540998 TOMM20LQ6UXN7 152 aa8.63□□□□□ -1.03
CDC42SE1-207ENST00000540998 CENPVQ7Z7K6 275 aaPredicted RBP8.63□□□□□ -1.03
CDC42SE1-207ENST00000540998 TGIF2LYQ8IUE0 185 aa8.63□□□□□ -1.03
CDC42SE1-207ENST00000540998 MS4A10Q96PG2 267 aa8.63□□□□□ -1.03
CDC42SE1-207ENST00000540998 NEU1Q99519 415 aa8.63□□□□□ -1.03
CDC42SE1-207ENST00000540998 GP6Q9HCN6 339 aa8.63□□□□□ -1.03
CDC42SE1-207ENST00000540998 TP53TG5Q9Y2B4 290 aa8.63□□□□□ -1.03
CDC42SE1-207ENST00000540998 YTHDF2Q9Y5A9 579 aaKnown RBP8.63□□□□□ -1.03
CDC42SE1-207ENST00000540998 PTPRBP23467 1997 aa8.62□□□□□ -1.03
CDC42SE1-207ENST00000540998 C9orf172C9J069 976 aa8.62□□□□□ -1.03
CDC42SE1-207ENST00000540998 NPIPB11E5RHQ5 1161 aa8.62□□□□□ -1.03
CDC42SE1-207ENST00000540998 ACTL6BO94805 426 aa8.62□□□□□ -1.03
CDC42SE1-207ENST00000540998 KIAA1644Q3SXP7 199 aa8.62□□□□□ -1.03
CDC42SE1-207ENST00000540998 Q6ZWC4 215 aa8.62□□□□□ -1.03
CDC42SE1-207ENST00000540998 OCC1Q8TAD7 63 aa8.62□□□□□ -1.03
CDC42SE1-207ENST00000540998 BCL2L2Q92843 193 aaPredicted RBP8.62□□□□□ -1.03
CDC42SE1-207ENST00000540998 FAM103A1Q9BTL3 118 aaKnown RBP8.62□□□□□ -1.03
CDC42SE1-207ENST00000540998 PKIBQ9C010 78 aa8.62□□□□□ -1.03
CDC42SE1-207ENST00000540998 STRADBQ9C0K7 418 aa8.62□□□□□ -1.03
CDC42SE1-207ENST00000540998 KCNIP1Q9NZI2 227 aa8.62□□□□□ -1.03
CDC42SE1-207ENST00000540998 SVEP1Q4LDE5 3571 aa8.62□□□□□ -1.03
CDC42SE1-207ENST00000540998 PIEZO2Q9H5I5 2752 aa8.62□□□□□ -1.03
CDC42SE1-207ENST00000540998 A0A1W2PPV4 95 aa8.62□□□□□ -1.03
CDC42SE1-207ENST00000540998 AHRRA9YTQ3 701 aa8.62□□□□□ -1.03
CDC42SE1-207ENST00000540998 ZNF25P17030 456 aaPredicted RBP8.62□□□□□ -1.03
CDC42SE1-207ENST00000540998 MEOX1P50221 254 aa8.62□□□□□ -1.03
CDC42SE1-207ENST00000540998 PDLIM4P50479 330 aa8.62□□□□□ -1.03
CDC42SE1-207ENST00000540998 C1orf229Q6ZS94 237 aaPredicted RBP8.62□□□□□ -1.03
CDC42SE1-207ENST00000540998 MOB3BQ86TA1 216 aa8.62□□□□□ -1.03
CDC42SE1-207ENST00000540998 NINJ1Q92982 152 aa8.62□□□□□ -1.03
CDC42SE1-207ENST00000540998 MS4A5Q9H3V2 200 aa8.62□□□□□ -1.03
CDC42SE1-207ENST00000540998 SEPSECSQ9HD40 501 aaKnown RBP8.62□□□□□ -1.03
CDC42SE1-207ENST00000540998 NAGKQ9UJ70 344 aa8.62□□□□□ -1.03
CDC42SE1-207ENST00000540998 ZNF318Q5VUA4 2279 aa8.62□□□□□ -1.03
CDC42SE1-207ENST00000540998 IGHV3OR15-7A0A075B7D8 119 aa8.61□□□□□ -1.03
CDC42SE1-207ENST00000540998 K7EN84 100 aa8.61□□□□□ -1.03
CDC42SE1-207ENST00000540998 TGOLN2O43493 480 aa8.61□□□□□ -1.03
CDC42SE1-207ENST00000540998 CD1BP29016 333 aa8.61□□□□□ -1.03
CDC42SE1-207ENST00000540998 SPCS3P61009 180 aa8.61□□□□□ -1.03
CDC42SE1-207ENST00000540998 FOXF2Q12947 444 aa8.61□□□□□ -1.03
CDC42SE1-207ENST00000540998 MSMO1Q15800 293 aa8.61□□□□□ -1.03
CDC42SE1-207ENST00000540998 LINC00596Q86U02 117 aa8.61□□□□□ -1.03
CDC42SE1-207ENST00000540998 ACY3Q96HD9 319 aa8.61□□□□□ -1.03
CDC42SE1-207ENST00000540998 SFRP2Q96HF1 295 aa8.61□□□□□ -1.03
CDC42SE1-207ENST00000540998 SPRR3Q9UBC9 169 aa8.61□□□□□ -1.03
CDC42SE1-207ENST00000540998 GCGP01275 180 aa8.61□□□□□ -1.03
CDC42SE1-207ENST00000540998 IGHEP01854 428 aa8.61□□□□□ -1.03
CDC42SE1-207ENST00000540998 TFPI2P48307 235 aa8.61□□□□□ -1.03
CDC42SE1-207ENST00000540998 TCL1AP56279 114 aa8.61□□□□□ -1.03
CDC42SE1-207ENST00000540998 EIF4EBP1Q13541 118 aaPredicted RBP8.61□□□□□ -1.03
CDC42SE1-207ENST00000540998 SSPNQ14714 243 aa8.61□□□□□ -1.03
CDC42SE1-207ENST00000540998 NRN1LQ496H8 165 aa8.61□□□□□ -1.03
CDC42SE1-207ENST00000540998 SPRNQ5BIV9 151 aa8.61□□□□□ -1.03
CDC42SE1-207ENST00000540998 R3HDM4Q96D70 268 aa8.61□□□□□ -1.03
CDC42SE1-207ENST00000540998 NOL4LQ96MY1 436 aaPredicted RBP8.61□□□□□ -1.03
CDC42SE1-207ENST00000540998 MGST2Q99735 147 aa8.61□□□□□ -1.03
CDC42SE1-207ENST00000540998 HINT2Q9BX68 163 aa8.61□□□□□ -1.03
CDC42SE1-207ENST00000540998 ZDHHC11Q9H8X9 412 aa8.61□□□□□ -1.03
CDC42SE1-207ENST00000540998 ELOVL5Q9NYP7 299 aa8.61□□□□□ -1.03
CDC42SE1-207ENST00000540998 WIPI2Q9Y4P8 454 aa8.61□□□□□ -1.03
CDC42SE1-207ENST00000540998 TMEM30CPA0ZSE6 113 aa8.61□□□□□ -1.03
CDC42SE1-207ENST00000540998 F6UZH7 168 aa8.61□□□□□ -1.03
CDC42SE1-207ENST00000540998 SERF1AO75920 110 aa8.61□□□□□ -1.03
CDC42SE1-207ENST00000540998 COX5BP10606 129 aa8.61□□□□□ -1.03
CDC42SE1-207ENST00000540998 GATA2P23769 480 aaPredicted RBP8.61□□□□□ -1.03
CDC42SE1-207ENST00000540998 TIMP3P35625 211 aa8.61□□□□□ -1.03
CDC42SE1-207ENST00000540998 ZNF146Q15072 292 aa8.61□□□□□ -1.03
CDC42SE1-207ENST00000540998 IQCJQ1A5X6 159 aa8.61□□□□□ -1.03
CDC42SE1-207ENST00000540998 FAM201AQ5SY85 155 aa8.61□□□□□ -1.03
CDC42SE1-207ENST00000540998 C11orf53Q8IXP5 236 aa8.61□□□□□ -1.03
CDC42SE1-207ENST00000540998 CISD2Q8N5K1 135 aaKnown RBP8.61□□□□□ -1.03
CDC42SE1-207ENST00000540998 ANAPC16Q96DE5 110 aa8.61□□□□□ -1.03
CDC42SE1-207ENST00000540998 B4GALT7Q9UBV7 327 aa8.61□□□□□ -1.03
CDC42SE1-207ENST00000540998 TIMM9Q9Y5J7 89 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms