RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 C5orf30Q96GV9 206 aa5.38□□□□□ -1.55
CLTCL1-206ENST00000540896 TMEM56Q96MV1 263 aa5.38□□□□□ -1.55
CLTCL1-206ENST00000540896 ZNF251Q9BRH9 671 aa5.38□□□□□ -1.55
CLTCL1-206ENST00000540896 MRPL20Q9BYC9 149 aaKnown RBP5.38□□□□□ -1.55
CLTCL1-206ENST00000540896 ZNF436Q9C0F3 470 aaPredicted RBP5.38□□□□□ -1.55
CLTCL1-206ENST00000540896 RAB18Q9NP72 206 aa5.38□□□□□ -1.55
CLTCL1-206ENST00000540896 SLC35D1Q9NTN3 355 aa5.38□□□□□ -1.55
CLTCL1-206ENST00000540896 GSKIPQ9P0R6 139 aa5.38□□□□□ -1.55
CLTCL1-206ENST00000540896 TMEM56-RWDD3S4R434 201 aa5.38□□□□□ -1.55
CLTCL1-206ENST00000540896 ZANQ9Y493 2812 aa5.38□□□□□ -1.55
CLTCL1-206ENST00000540896 NIPBLQ6KC79 2804 aaeCLIP5.38□□□□□ -1.55
CLTCL1-206ENST00000540896 IGHV1-69DA0A0B4J2H0 117 aa5.37□□□□□ -1.55
CLTCL1-206ENST00000540896 ODF3BA8MYP8 253 aa5.37□□□□□ -1.55
CLTCL1-206ENST00000540896 RGS13O14921 159 aa5.37□□□□□ -1.55
CLTCL1-206ENST00000540896 NPFFO15130 113 aa5.37□□□□□ -1.55
CLTCL1-206ENST00000540896 SHOXO15266 292 aa5.37□□□□□ -1.55
CLTCL1-206ENST00000540896 RBMXL2O75526 392 aaKnown RBP5.37□□□□□ -1.55
CLTCL1-206ENST00000540896 ADAP1O75689 374 aa5.37□□□□□ -1.55
CLTCL1-206ENST00000540896 CRYZL1O95825 349 aa5.37□□□□□ -1.55
CLTCL1-206ENST00000540896 HPRT1P00492 218 aa5.37□□□□□ -1.55
CLTCL1-206ENST00000540896 IGHV1-69P01742 117 aa5.37□□□□□ -1.55
CLTCL1-206ENST00000540896 TRAPPC2P0DI81 140 aa5.37□□□□□ -1.55
CLTCL1-206ENST00000540896 TRAPPC2BP0DI82 140 aa5.37□□□□□ -1.55
CLTCL1-206ENST00000540896 SULT1A3P0DMM9 295 aa5.37□□□□□ -1.55
CLTCL1-206ENST00000540896 SULT1A4P0DMN0 295 aa5.37□□□□□ -1.55
CLTCL1-206ENST00000540896 CXCL3P19876 107 aa5.37□□□□□ -1.55
CLTCL1-206ENST00000540896 ZNF137PP52743 207 aa5.37□□□□□ -1.55
CLTCL1-206ENST00000540896 ERVK-16P61578 105 aa5.37□□□□□ -1.55
CLTCL1-206ENST00000540896 RPS16P62249 146 aaKnown RBP5.37□□□□□ -1.55
CLTCL1-206ENST00000540896 EIF4EBP1Q13541 118 aaPredicted RBP5.37□□□□□ -1.55
CLTCL1-206ENST00000540896 DIAPH2-AS1Q14236 149 aa5.37□□□□□ -1.55
CLTCL1-206ENST00000540896 C2orf68Q2NKX9 166 aa5.37□□□□□ -1.55
CLTCL1-206ENST00000540896 IAH1Q2TAA2 248 aaPredicted RBP5.37□□□□□ -1.55
CLTCL1-206ENST00000540896 MIDNQ504T8 468 aa5.37□□□□□ -1.55
CLTCL1-206ENST00000540896 MINOS1Q5TGZ0 78 aa5.37□□□□□ -1.55
CLTCL1-206ENST00000540896 GGNBP1Q5YKI7 109 aa5.37□□□□□ -1.55
CLTCL1-206ENST00000540896 THOC7Q6I9Y2 204 aaKnown RBP5.37□□□□□ -1.55
CLTCL1-206ENST00000540896 HCP5Q6MZN7 132 aa5.37□□□□□ -1.55
CLTCL1-206ENST00000540896 CCDC144NLQ6NUI1 221 aa5.37□□□□□ -1.55
CLTCL1-206ENST00000540896 H2BFWTQ7Z2G1 175 aa5.37□□□□□ -1.55
CLTCL1-206ENST00000540896 LHFPL4Q7Z7J7 247 aa5.37□□□□□ -1.55
CLTCL1-206ENST00000540896 SLC35G3Q8N808 338 aa5.37□□□□□ -1.55
CLTCL1-206ENST00000540896 LRTM2Q8N967 370 aa5.37□□□□□ -1.55
CLTCL1-206ENST00000540896 DMBX1Q8NFW5 382 aa5.37□□□□□ -1.55
CLTCL1-206ENST00000540896 IL22RA2Q969J5 263 aa5.37□□□□□ -1.55
CLTCL1-206ENST00000540896 ST6GALNAC6Q969X2 333 aa5.37□□□□□ -1.55
CLTCL1-206ENST00000540896 MALSU1Q96EH3 234 aa5.37□□□□□ -1.55
CLTCL1-206ENST00000540896 SEC22AQ96IW7 307 aa5.37□□□□□ -1.55
CLTCL1-206ENST00000540896 NABP2Q9BQ15 211 aa5.37□□□□□ -1.55
CLTCL1-206ENST00000540896 AIFM2Q9BRQ8 373 aa5.37□□□□□ -1.55
CLTCL1-206ENST00000540896 FAM212BQ9NTI7 297 aaPredicted RBP5.37□□□□□ -1.55
CLTCL1-206ENST00000540896 COMMD9Q9P000 198 aa5.37□□□□□ -1.55
CLTCL1-206ENST00000540896 WASHC3Q9Y3C0 194 aa5.37□□□□□ -1.55
CLTCL1-206ENST00000540896 FAM96BQ9Y3D0 163 aa5.37□□□□□ -1.55
CLTCL1-206ENST00000540896 TMED3Q9Y3Q3 217 aa5.37□□□□□ -1.55
CLTCL1-206ENST00000540896 TBL2Q9Y4P3 447 aaKnown RBP5.37□□□□□ -1.55
CLTCL1-206ENST00000540896 MINOS1-NBL1R4GNA1 71 aa5.37□□□□□ -1.55
CLTCL1-206ENST00000540896 YLPM1P49750 1951 aaKnown RBP5.36□□□□□ -1.55
CLTCL1-206ENST00000540896 CR1P17927 2039 aa5.36□□□□□ -1.55
CLTCL1-206ENST00000540896 IGHV3-72A0A0B4J1Y9 119 aa5.36□□□□□ -1.55
CLTCL1-206ENST00000540896 TRAV40A0A0B4J280 105 aa5.36□□□□□ -1.55
CLTCL1-206ENST00000540896 IGHV1-3A0A0C4DH29 117 aa5.36□□□□□ -1.55
CLTCL1-206ENST00000540896 DUXBA0A1W2PPF3 345 aa5.36□□□□□ -1.55
CLTCL1-206ENST00000540896 OOSP1A8MZH6 123 aa5.36□□□□□ -1.55
CLTCL1-206ENST00000540896 H0YJW9 148 aa5.36□□□□□ -1.55
CLTCL1-206ENST00000540896 LY6LH3BQJ8 138 aa5.36□□□□□ -1.55
CLTCL1-206ENST00000540896 TIMM23O14925 209 aa5.36□□□□□ -1.55
CLTCL1-206ENST00000540896 RBFOX2O43251 390 aaKnown RBP eCLIP5.36□□□□□ -1.55
CLTCL1-206ENST00000540896 S1PR2O95136 353 aa5.36□□□□□ -1.55
CLTCL1-206ENST00000540896 LY6G6DO95868 133 aa5.36□□□□□ -1.55
CLTCL1-206ENST00000540896 HRASP01112 189 aa5.36□□□□□ -1.55
CLTCL1-206ENST00000540896 VDAC1P21796 283 aa5.36□□□□□ -1.55
CLTCL1-206ENST00000540896 BRS3P32247 399 aa5.36□□□□□ -1.55
CLTCL1-206ENST00000540896 SAA4P35542 130 aa5.36□□□□□ -1.55
CLTCL1-206ENST00000540896 G6PCP35575 357 aa5.36□□□□□ -1.55
CLTCL1-206ENST00000540896 RAB13P51153 203 aa5.36□□□□□ -1.55
CLTCL1-206ENST00000540896 SRSF3P84103 164 aaKnown RBP5.36□□□□□ -1.55
CLTCL1-206ENST00000540896 CYCSP99999 105 aaKnown RBP5.36□□□□□ -1.55
CLTCL1-206ENST00000540896 HES1Q14469 280 aa5.36□□□□□ -1.55
CLTCL1-206ENST00000540896 HNF4GQ14541 408 aa5.36□□□□□ -1.55
CLTCL1-206ENST00000540896 ZNF585BQ52M93 769 aa5.36□□□□□ -1.55
CLTCL1-206ENST00000540896 DHRS7BQ6IAN0 325 aaPredicted RBP5.36□□□□□ -1.55
CLTCL1-206ENST00000540896 BRD3OSQ6XYD6 125 aa5.36□□□□□ -1.55
CLTCL1-206ENST00000540896 SSX9Q7RTT3 188 aa5.36□□□□□ -1.55
CLTCL1-206ENST00000540896 OR8H3Q8N146 312 aa5.36□□□□□ -1.55
CLTCL1-206ENST00000540896 OR5AN1Q8NGI8 311 aa5.36□□□□□ -1.55
CLTCL1-206ENST00000540896 OR5M8Q8NGP6 311 aa5.36□□□□□ -1.55
CLTCL1-206ENST00000540896 OR1S1Q8NH92 325 aa5.36□□□□□ -1.55
CLTCL1-206ENST00000540896 LHFPL5Q8TAF8 219 aa5.36□□□□□ -1.55
CLTCL1-206ENST00000540896 CHAC2Q8WUX2 184 aa5.36□□□□□ -1.55
CLTCL1-206ENST00000540896 DDB2Q92466 427 aa5.36□□□□□ -1.55
CLTCL1-206ENST00000540896 FLYWCH2Q96CP2 140 aaKnown RBP5.36□□□□□ -1.55
CLTCL1-206ENST00000540896 R3HDM4Q96D70 268 aa5.36□□□□□ -1.55
CLTCL1-206ENST00000540896 C2orf50Q96LR7 162 aa5.36□□□□□ -1.55
CLTCL1-206ENST00000540896 SPIN2AQ99865 258 aa5.36□□□□□ -1.55
CLTCL1-206ENST00000540896 SMR3AQ99954 134 aa5.36□□□□□ -1.55
CLTCL1-206ENST00000540896 SPIN2BQ9BPZ2 258 aa5.36□□□□□ -1.55
CLTCL1-206ENST00000540896 MS4A7Q9GZW8 240 aaPredicted RBP5.36□□□□□ -1.55
CLTCL1-206ENST00000540896 RANBP3Q9H6Z4 567 aaPredicted RBP5.36□□□□□ -1.55
CLTCL1-206ENST00000540896 PLEKHA2Q9HB19 425 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms