RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 GNG10P50151 68 aa10.18□□□□□ -0.78
SMAD3-204ENST00000540846 TAS2R30P59541 319 aa10.18□□□□□ -0.78
SMAD3-204ENST00000540846 NHLH2Q02577 135 aa10.18□□□□□ -0.78
SMAD3-204ENST00000540846 TNFRSF9Q07011 255 aa10.18□□□□□ -0.78
SMAD3-204ENST00000540846 C1orf229Q6ZS94 237 aaPredicted RBP10.18□□□□□ -0.78
SMAD3-204ENST00000540846 LYG1Q8N1E2 194 aa10.18□□□□□ -0.78
SMAD3-204ENST00000540846 C8orf31Q8N9H6 132 aa10.18□□□□□ -0.78
SMAD3-204ENST00000540846 LY6G5BQ8NDX9 201 aa10.18□□□□□ -0.78
SMAD3-204ENST00000540846 LRRC20Q8TCA0 184 aa10.18□□□□□ -0.78
SMAD3-204ENST00000540846 R3HDM4Q96D70 268 aa10.18□□□□□ -0.78
SMAD3-204ENST00000540846 RAB39BQ96DA2 213 aa10.18□□□□□ -0.78
SMAD3-204ENST00000540846 SSBP3Q9BWW4 388 aaPredicted RBP10.18□□□□□ -0.78
SMAD3-204ENST00000540846 WFDC1Q9HC57 220 aa10.18□□□□□ -0.78
SMAD3-204ENST00000540846 FAM157AC9JC47 383 aa10.17□□□□□ -0.78
SMAD3-204ENST00000540846 TXNL1O43396 289 aa10.17□□□□□ -0.78
SMAD3-204ENST00000540846 FCGR3BO75015 233 aa10.17□□□□□ -0.78
SMAD3-204ENST00000540846 RPL23AP62750 156 aaKnown RBP10.17□□□□□ -0.78
SMAD3-204ENST00000540846 AARDQ4LEZ3 155 aa10.17□□□□□ -0.78
SMAD3-204ENST00000540846 CLEC9AQ6UXN8 241 aa10.17□□□□□ -0.78
SMAD3-204ENST00000540846 OR4S2Q8NH73 311 aa10.17□□□□□ -0.78
SMAD3-204ENST00000540846 SMIM8Q96KF7 97 aa10.17□□□□□ -0.78
SMAD3-204ENST00000540846 S1PR3Q99500 378 aa10.17□□□□□ -0.78
SMAD3-204ENST00000540846 GINS3Q9BRX5 216 aa10.17□□□□□ -0.78
SMAD3-204ENST00000540846 REG4Q9BYZ8 158 aa10.17□□□□□ -0.78
SMAD3-204ENST00000540846 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.17□□□□□ -0.78
SMAD3-204ENST00000540846 PFDN2Q9UHV9 154 aa10.17□□□□□ -0.78
SMAD3-204ENST00000540846 POLR3KQ9Y2Y1 108 aaPredicted RBP10.17□□□□□ -0.78
SMAD3-204ENST00000540846 A0A087X0M5 115 aa10.16□□□□□ -0.78
SMAD3-204ENST00000540846 A0A1B0GX30 115 aa10.16□□□□□ -0.78
SMAD3-204ENST00000540846 MFSD2BA6NFX1 497 aa10.16□□□□□ -0.78
SMAD3-204ENST00000540846 MED6O75586 246 aa10.16□□□□□ -0.78
SMAD3-204ENST00000540846 USF1P22415 310 aaPredicted RBP10.16□□□□□ -0.78
SMAD3-204ENST00000540846 ARHGDIBP52566 201 aa10.16□□□□□ -0.78
SMAD3-204ENST00000540846 GNB2P62879 340 aa10.16□□□□□ -0.78
SMAD3-204ENST00000540846 ZNF833PQ6ZTB9 187 aa10.16□□□□□ -0.78
SMAD3-204ENST00000540846 H2BFWTQ7Z2G1 175 aa10.16□□□□□ -0.78
SMAD3-204ENST00000540846 C11orf42Q8N5U0 333 aa10.16□□□□□ -0.78
SMAD3-204ENST00000540846 LINC00311Q8N616 119 aa10.16□□□□□ -0.78
SMAD3-204ENST00000540846 WFDC11Q8NEX6 87 aa10.16□□□□□ -0.78
SMAD3-204ENST00000540846 ZNF596Q8TC21 504 aa10.16□□□□□ -0.78
SMAD3-204ENST00000540846 RNF141Q8WVD5 230 aa10.16□□□□□ -0.78
SMAD3-204ENST00000540846 C1orf159Q96HA4 380 aa10.16□□□□□ -0.78
SMAD3-204ENST00000540846 Q96MF0 132 aa10.16□□□□□ -0.78
SMAD3-204ENST00000540846 ZNF469Q96JG9 3925 aaPredicted RBP10.16□□□□□ -0.78
SMAD3-204ENST00000540846 CELSR1Q9NYQ6 3014 aa10.15□□□□□ -0.78
SMAD3-204ENST00000540846 WNK2Q9Y3S1 2297 aa10.15□□□□□ -0.78
SMAD3-204ENST00000540846 FAM157CP0CG43 387 aa10.15□□□□□ -0.78
SMAD3-204ENST00000540846 NQO2P16083 231 aa10.15□□□□□ -0.78
SMAD3-204ENST00000540846 SULT1A1P50225 295 aa10.15□□□□□ -0.78
SMAD3-204ENST00000540846 UBE2KP61086 200 aa10.15□□□□□ -0.78
SMAD3-204ENST00000540846 ERVK-16P61578 105 aa10.15□□□□□ -0.78
SMAD3-204ENST00000540846 LOXL1Q08397 574 aaPredicted RBP10.15□□□□□ -0.78
SMAD3-204ENST00000540846 ZNF266Q14584 549 aa10.15□□□□□ -0.78
SMAD3-204ENST00000540846 AANATQ16613 207 aa10.15□□□□□ -0.78
SMAD3-204ENST00000540846 STX12Q86Y82 276 aa10.15□□□□□ -0.78
SMAD3-204ENST00000540846 STPG2Q8N412 459 aa10.15□□□□□ -0.78
SMAD3-204ENST00000540846 ZNF383Q8NA42 475 aa10.15□□□□□ -0.78
SMAD3-204ENST00000540846 H3BP45 60 aa10.14□□□□□ -0.79
SMAD3-204ENST00000540846 CST7O76096 145 aa10.14□□□□□ -0.79
SMAD3-204ENST00000540846 RBP4P02753 201 aa10.14□□□□□ -0.79
SMAD3-204ENST00000540846 SEC11BP0C7V7 166 aa10.14□□□□□ -0.79
SMAD3-204ENST00000540846 SULT1A2P50226 295 aa10.14□□□□□ -0.79
SMAD3-204ENST00000540846 ERVFRD-1P60508 538 aa10.14□□□□□ -0.79
SMAD3-204ENST00000540846 CLINT1Q14677 625 aa10.14□□□□□ -0.79
SMAD3-204ENST00000540846 FAM71F2Q6NXP2 309 aa10.14□□□□□ -0.79
SMAD3-204ENST00000540846 HSD17B13Q7Z5P4 300 aaPredicted RBP10.14□□□□□ -0.79
SMAD3-204ENST00000540846 EIF4E3Q8N5X7 224 aaKnown RBP10.14□□□□□ -0.79
SMAD3-204ENST00000540846 OR5C1Q8NGR4 320 aa10.14□□□□□ -0.79
SMAD3-204ENST00000540846 RBKSQ9H477 322 aa10.14□□□□□ -0.79
SMAD3-204ENST00000540846 TEX15Q9BXT5 2789 aa10.14□□□□□ -0.79
SMAD3-204ENST00000540846 LOC105371242A0A075B767 164 aa10.14□□□□□ -0.79
SMAD3-204ENST00000540846 RNF223E7ERA6 249 aa10.14□□□□□ -0.79
SMAD3-204ENST00000540846 OR9G9P0C7N8 305 aa10.14□□□□□ -0.79
SMAD3-204ENST00000540846 IGHV1-8P0DP01 117 aa10.14□□□□□ -0.79
SMAD3-204ENST00000540846 SPP1P10451 314 aa10.14□□□□□ -0.79
SMAD3-204ENST00000540846 IAPPP10997 89 aa10.14□□□□□ -0.79
SMAD3-204ENST00000540846 DYNLT3P51808 116 aa10.14□□□□□ -0.79
SMAD3-204ENST00000540846 ZNF137PP52743 207 aa10.14□□□□□ -0.79
SMAD3-204ENST00000540846 LCN2P80188 198 aa10.14□□□□□ -0.79
SMAD3-204ENST00000540846 POU2AF1Q16633 256 aa10.14□□□□□ -0.79
SMAD3-204ENST00000540846 TOR2AQ5JU69 321 aa10.14□□□□□ -0.79
SMAD3-204ENST00000540846 DHRS7BQ6IAN0 325 aaPredicted RBP10.14□□□□□ -0.79
SMAD3-204ENST00000540846 OR1S2Q8NGQ3 325 aa10.14□□□□□ -0.79
SMAD3-204ENST00000540846 SAT2Q96F10 170 aaPredicted RBP10.14□□□□□ -0.79
SMAD3-204ENST00000540846 MMP26Q9NRE1 261 aa10.14□□□□□ -0.79
SMAD3-204ENST00000540846 PSENENQ9NZ42 101 aa10.14□□□□□ -0.79
SMAD3-204ENST00000540846 ZNRD1Q9P1U0 126 aa10.14□□□□□ -0.79
SMAD3-204ENST00000540846 PPIAL4CA0A0B4J2A2 164 aa10.13□□□□□ -0.79
SMAD3-204ENST00000540846 IGHV2-70DA0A0C4DH43 119 aa10.13□□□□□ -0.79
SMAD3-204ENST00000540846 J3QR06 171 aa10.13□□□□□ -0.79
SMAD3-204ENST00000540846 FBXO24O75426 580 aa10.13□□□□□ -0.79
SMAD3-204ENST00000540846 CRYZL1O95825 349 aa10.13□□□□□ -0.79
SMAD3-204ENST00000540846 FGF2P09038 288 aa10.13□□□□□ -0.79
SMAD3-204ENST00000540846 CT45A6P0DMU7 189 aa10.13□□□□□ -0.79
SMAD3-204ENST00000540846 CT45A5P0DMU8 189 aa10.13□□□□□ -0.79
SMAD3-204ENST00000540846 CT45A7P0DMV0 189 aa10.13□□□□□ -0.79
SMAD3-204ENST00000540846 PPIAL4GP0DN37 164 aa10.13□□□□□ -0.79
SMAD3-204ENST00000540846 TMEM267Q0VDI3 215 aaPredicted RBP10.13□□□□□ -0.79
SMAD3-204ENST00000540846 PDLIM3Q53GG5 364 aaPredicted RBP10.13□□□□□ -0.79
SMAD3-204ENST00000540846 Q8N7P7 452 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms