RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 HTD2P86397 168 aa9.52□□□□□ -0.89
C11orf54-214ENST00000540113 HIST2H2BEQ16778 126 aa9.52□□□□□ -0.89
C11orf54-214ENST00000540113 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.52□□□□□ -0.89
C11orf54-214ENST00000540113 FAM90A1Q86YD7 464 aa9.52□□□□□ -0.89
C11orf54-214ENST00000540113 C1orf174Q8IYL3 243 aa9.52□□□□□ -0.89
C11orf54-214ENST00000540113 ABHD12Q8N2K0 398 aa9.52□□□□□ -0.89
C11orf54-214ENST00000540113 HIST1H2BHQ93079 126 aa9.52□□□□□ -0.89
C11orf54-214ENST00000540113 HIST1H2BNQ99877 126 aa9.52□□□□□ -0.89
C11orf54-214ENST00000540113 HIST1H2BMQ99879 126 aa9.52□□□□□ -0.89
C11orf54-214ENST00000540113 ZNRD1Q9P1U0 126 aa9.52□□□□□ -0.89
C11orf54-214ENST00000540113 PLCE1Q9P212 2302 aa9.52□□□□□ -0.89
C11orf54-214ENST00000540113 KALRNO60229 2985 aa9.52□□□□□ -0.89
C11orf54-214ENST00000540113 ANKRD11Q6UB99 2663 aaPredicted RBP9.52□□□□□ -0.89
C11orf54-214ENST00000540113 MGST3O14880 152 aa9.52□□□□□ -0.89
C11orf54-214ENST00000540113 SOX15O60248 233 aa9.52□□□□□ -0.89
C11orf54-214ENST00000540113 IFNA1P01562 189 aa9.52□□□□□ -0.89
C11orf54-214ENST00000540113 CEACAM8P31997 349 aaPredicted RBP9.52□□□□□ -0.89
C11orf54-214ENST00000540113 UBE2G2P60604 165 aa9.52□□□□□ -0.89
C11orf54-214ENST00000540113 PAX5Q02548 391 aa9.52□□□□□ -0.89
C11orf54-214ENST00000540113 FOXC1Q12948 553 aa9.52□□□□□ -0.89
C11orf54-214ENST00000540113 ZNF709Q8N972 641 aa9.52□□□□□ -0.89
C11orf54-214ENST00000540113 OR4A16Q8NH70 328 aa9.52□□□□□ -0.89
C11orf54-214ENST00000540113 SDSLQ96GA7 329 aa9.52□□□□□ -0.89
C11orf54-214ENST00000540113 FAM210BQ96KR6 192 aa9.52□□□□□ -0.89
C11orf54-214ENST00000540113 SNX22Q96L94 193 aa9.52□□□□□ -0.89
C11orf54-214ENST00000540113 MRPL37Q9BZE1 423 aaKnown RBP9.52□□□□□ -0.89
C11orf54-214ENST00000540113 IFI27L2Q9H2X8 130 aa9.52□□□□□ -0.89
C11orf54-214ENST00000540113 PATZ1Q9HBE1 687 aaKnown RBP9.52□□□□□ -0.89
C11orf54-214ENST00000540113 SIRT7Q9NRC8 400 aa9.52□□□□□ -0.89
C11orf54-214ENST00000540113 AURKAIP1Q9NWT8 199 aaPredicted RBP9.52□□□□□ -0.89
C11orf54-214ENST00000540113 TIMM9Q9Y5J7 89 aa9.52□□□□□ -0.89
C11orf54-214ENST00000540113 CTXND1A0A1B0GTU2 59 aa9.51□□□□□ -0.89
C11orf54-214ENST00000540113 LINC00587B1AMM8 73 aa9.51□□□□□ -0.89
C11orf54-214ENST00000540113 S100A8P05109 93 aa9.51□□□□□ -0.89
C11orf54-214ENST00000540113 RD3LP0DJH9 198 aa9.51□□□□□ -0.89
C11orf54-214ENST00000540113 GZMHP20718 246 aa9.51□□□□□ -0.89
C11orf54-214ENST00000540113 GNG10P50151 68 aa9.51□□□□□ -0.89
C11orf54-214ENST00000540113 ATP6V1FQ16864 119 aa9.51□□□□□ -0.89
C11orf54-214ENST00000540113 CDPF1Q6NVV7 123 aa9.51□□□□□ -0.89
C11orf54-214ENST00000540113 CENPVQ7Z7K6 275 aaPredicted RBP9.51□□□□□ -0.89
C11orf54-214ENST00000540113 ZCCHC24Q8N2G6 241 aaKnown RBP9.51□□□□□ -0.89
C11orf54-214ENST00000540113 Q8N7P7 452 aa9.51□□□□□ -0.89
C11orf54-214ENST00000540113 FAM57AQ8TBR7 257 aa9.51□□□□□ -0.89
C11orf54-214ENST00000540113 ABHD5Q8WTS1 349 aa9.51□□□□□ -0.89
C11orf54-214ENST00000540113 FRZBQ92765 325 aa9.51□□□□□ -0.89
C11orf54-214ENST00000540113 HEYLQ9NQ87 328 aaPredicted RBP9.51□□□□□ -0.89
C11orf54-214ENST00000540113 CALYQ9NYX4 217 aa9.51□□□□□ -0.89
C11orf54-214ENST00000540113 SPTBN2O15020 2390 aa9.51□□□□□ -0.89
C11orf54-214ENST00000540113 CLDN34H7C241 214 aa9.51□□□□□ -0.89
C11orf54-214ENST00000540113 CRYABP02511 175 aaKnown RBP9.51□□□□□ -0.89
C11orf54-214ENST00000540113 SMIM6P0DI80 62 aa9.51□□□□□ -0.89
C11orf54-214ENST00000540113 CCKARP32238 428 aa9.51□□□□□ -0.89
C11orf54-214ENST00000540113 GLRXP35754 106 aa9.51□□□□□ -0.89
C11orf54-214ENST00000540113 PSMB3P49720 205 aa9.51□□□□□ -0.89
C11orf54-214ENST00000540113 MZT1Q08AG7 82 aa9.51□□□□□ -0.89
C11orf54-214ENST00000540113 C17orf58Q2M2W7 97 aa9.51□□□□□ -0.89
C11orf54-214ENST00000540113 C16orf82Q7Z2V1 217 aa9.51□□□□□ -0.89
C11orf54-214ENST00000540113 EDARADDQ8WWZ3 215 aa9.51□□□□□ -0.89
C11orf54-214ENST00000540113 CIB3Q96Q77 187 aaPredicted RBP9.51□□□□□ -0.89
C11orf54-214ENST00000540113 P2RX4Q99571 388 aa9.51□□□□□ -0.89
C11orf54-214ENST00000540113 TMEM204Q9BSN7 226 aa9.51□□□□□ -0.89
C11orf54-214ENST00000540113 SFXN3Q9BWM7 321 aa9.51□□□□□ -0.89
C11orf54-214ENST00000540113 ACTR3CQ9C0K3 210 aaPredicted RBP9.51□□□□□ -0.89
C11orf54-214ENST00000540113 PARLQ9H300 379 aa9.51□□□□□ -0.89
C11orf54-214ENST00000540113 DMXL2Q8TDJ6 3036 aa9.5□□□□□ -0.89
C11orf54-214ENST00000540113 BSNQ9UPA5 3926 aa9.5□□□□□ -0.89
C11orf54-214ENST00000540113 PIEZO2Q9H5I5 2752 aa9.5□□□□□ -0.89
C11orf54-214ENST00000540113 ROS1P08922 2347 aa9.5□□□□□ -0.89
C11orf54-214ENST00000540113 IGLV3-9A0A075B6K5 115 aa9.5□□□□□ -0.89
C11orf54-214ENST00000540113 CXorf65A6NEN9 183 aa9.5□□□□□ -0.89
C11orf54-214ENST00000540113 MMP23AO75900 390 aa9.5□□□□□ -0.89
C11orf54-214ENST00000540113 HPRT1P00492 218 aa9.5□□□□□ -0.89
C11orf54-214ENST00000540113 TRGC1P0CF51 173 aa9.5□□□□□ -0.89
C11orf54-214ENST00000540113 HOXA5P20719 270 aa9.5□□□□□ -0.89
C11orf54-214ENST00000540113 CD1BP29016 333 aa9.5□□□□□ -0.89
C11orf54-214ENST00000540113 CFHR2P36980 270 aa9.5□□□□□ -0.89
C11orf54-214ENST00000540113 CT45A1Q5HYN5 189 aa9.5□□□□□ -0.89
C11orf54-214ENST00000540113 OR51G1Q8NGK1 321 aa9.5□□□□□ -0.89
C11orf54-214ENST00000540113 CT45A3Q8NHU0 189 aa9.5□□□□□ -0.89
C11orf54-214ENST00000540113 S1PR3Q99500 378 aa9.5□□□□□ -0.89
C11orf54-214ENST00000540113 CCL13Q99616 98 aa9.5□□□□□ -0.89
C11orf54-214ENST00000540113 ELOVL1Q9BW60 279 aa9.5□□□□□ -0.89
C11orf54-214ENST00000540113 GSN-AS1Q9NRJ2 163 aa9.5□□□□□ -0.89
C11orf54-214ENST00000540113 TMEM140Q9NV12 185 aa9.5□□□□□ -0.89
C11orf54-214ENST00000540113 SH3BGRL2Q9UJC5 107 aa9.5□□□□□ -0.89
C11orf54-214ENST00000540113 JPT1Q9UK76 154 aa9.5□□□□□ -0.89
C11orf54-214ENST00000540113 CUL9Q8IWT3 2517 aa9.5□□□□□ -0.89
C11orf54-214ENST00000540113 B4DEV8 164 aa9.5□□□□□ -0.89
C11orf54-214ENST00000540113 YPEL1O60688 119 aa9.5□□□□□ -0.89
C11orf54-214ENST00000540113 GYPAP02724 150 aa9.5□□□□□ -0.89
C11orf54-214ENST00000540113 OPN1MWP04001 364 aa9.5□□□□□ -0.89
C11orf54-214ENST00000540113 FABP1P07148 127 aa9.5□□□□□ -0.89
C11orf54-214ENST00000540113 OPN1MW2P0DN77 364 aa9.5□□□□□ -0.89
C11orf54-214ENST00000540113 OPN1MW3P0DN78 364 aa9.5□□□□□ -0.89
C11orf54-214ENST00000540113 RPL23P62829 140 aaKnown RBP9.5□□□□□ -0.89
C11orf54-214ENST00000540113 GNB2P62879 340 aa9.5□□□□□ -0.89
C11orf54-214ENST00000540113 RELBQ01201 579 aa9.5□□□□□ -0.89
C11orf54-214ENST00000540113 TMEM241Q24JQ0 296 aa9.5□□□□□ -0.89
C11orf54-214ENST00000540113 C3orf36Q3SXR2 165 aa9.5□□□□□ -0.89
C11orf54-214ENST00000540113 C1orf87Q8N0U7 546 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms