RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 ADAMTS9Q9P2N4 1935 aa5.21□□□□□ -1.58
PTPRD-214ENST00000540109 NTN3O00634 580 aaPredicted RBP5.2□□□□□ -1.58
PTPRD-214ENST00000540109 KLF7O75840 302 aaPredicted RBP5.2□□□□□ -1.58
PTPRD-214ENST00000540109 APOBEC3AP31941 199 aaPredicted RBP5.2□□□□□ -1.58
PTPRD-214ENST00000540109 FOLR3P41439 243 aa5.2□□□□□ -1.58
PTPRD-214ENST00000540109 COA6Q5JTJ3 125 aaKnown RBP5.2□□□□□ -1.58
PTPRD-214ENST00000540109 TMEM144Q7Z5S9 345 aa5.2□□□□□ -1.58
PTPRD-214ENST00000540109 BIVMQ86UB2 503 aa5.2□□□□□ -1.58
PTPRD-214ENST00000540109 RPS19BP1Q86WX3 136 aaKnown RBP5.2□□□□□ -1.58
PTPRD-214ENST00000540109 MRAP2Q96G30 205 aa5.2□□□□□ -1.58
PTPRD-214ENST00000540109 GUCD1Q96NT3 240 aa5.2□□□□□ -1.58
PTPRD-214ENST00000540109 MCTS1Q9ULC4 181 aaKnown RBP5.2□□□□□ -1.58
PTPRD-214ENST00000540109 TRAV8-7A0A075B6U6 113 aa5.2□□□□□ -1.58
PTPRD-214ENST00000540109 LIPT2A6NK58 231 aa5.2□□□□□ -1.58
PTPRD-214ENST00000540109 B5MCH6 92 aa5.2□□□□□ -1.58
PTPRD-214ENST00000540109 NDUFB4O95168 129 aa5.2□□□□□ -1.58
PTPRD-214ENST00000540109 CEACAM6P40199 344 aa5.2□□□□□ -1.58
PTPRD-214ENST00000540109 SPINK9Q5DT21 86 aa5.2□□□□□ -1.58
PTPRD-214ENST00000540109 FAM71F2Q6NXP2 309 aa5.2□□□□□ -1.58
PTPRD-214ENST00000540109 VSTM2AQ8TAG5 236 aa5.2□□□□□ -1.58
PTPRD-214ENST00000540109 AQP3Q92482 292 aa5.2□□□□□ -1.58
PTPRD-214ENST00000540109 OXGR1Q96P68 337 aa5.2□□□□□ -1.58
PTPRD-214ENST00000540109 SDF2L1Q9HCN8 221 aa5.2□□□□□ -1.58
PTPRD-214ENST00000540109 TP53BP1Q12888 1972 aaPredicted RBP5.2□□□□□ -1.58
PTPRD-214ENST00000540109 LOC105371242A0A075B767 164 aa5.2□□□□□ -1.58
PTPRD-214ENST00000540109 PPIAL4CA0A0B4J2A2 164 aa5.2□□□□□ -1.58
PTPRD-214ENST00000540109 LMX1BO60663 402 aa5.2□□□□□ -1.58
PTPRD-214ENST00000540109 TGFAP01135 160 aa5.2□□□□□ -1.58
PTPRD-214ENST00000540109 PPIAL4GP0DN37 164 aa5.2□□□□□ -1.58
PTPRD-214ENST00000540109 PDCD1Q15116 288 aa5.2□□□□□ -1.58
PTPRD-214ENST00000540109 GUSBP11Q6P575 273 aa5.2□□□□□ -1.58
PTPRD-214ENST00000540109 Q6ZVH6 145 aa5.2□□□□□ -1.58
PTPRD-214ENST00000540109 TTC9CQ8N5M4 171 aa5.2□□□□□ -1.58
PTPRD-214ENST00000540109 WDR31Q8NA23 367 aa5.2□□□□□ -1.58
PTPRD-214ENST00000540109 SCCPDHQ8NBX0 429 aa5.2□□□□□ -1.58
PTPRD-214ENST00000540109 GALMQ96C23 342 aa5.2□□□□□ -1.58
PTPRD-214ENST00000540109 TMEM56Q96MV1 263 aa5.2□□□□□ -1.58
PTPRD-214ENST00000540109 ADAMTS20P59510 1910 aa5.2□□□□□ -1.58
PTPRD-214ENST00000540109 CEP192Q8TEP8 1941 aa5.2□□□□□ -1.58
PTPRD-214ENST00000540109 KLRB1Q12918 225 aa5.2□□□□□ -1.58
PTPRD-214ENST00000540109 ATP5L2Q7Z4Y8 100 aa5.2□□□□□ -1.58
PTPRD-214ENST00000540109 CHCHD1Q96BP2 118 aaKnown RBP5.2□□□□□ -1.58
PTPRD-214ENST00000540109 S1PR3Q99500 378 aa5.2□□□□□ -1.58
PTPRD-214ENST00000540109 POLR3KQ9Y2Y1 108 aaPredicted RBP5.2□□□□□ -1.58
PTPRD-214ENST00000540109 ATG2BQ96BY7 2078 aa5.2□□□□□ -1.58
PTPRD-214ENST00000540109 HS3ST1O14792 307 aa5.2□□□□□ -1.58
PTPRD-214ENST00000540109 MPPED1O15442 326 aa5.2□□□□□ -1.58
PTPRD-214ENST00000540109 RBFOX2O43251 390 aaKnown RBP eCLIP5.2□□□□□ -1.58
PTPRD-214ENST00000540109 AZU1P20160 251 aa5.2□□□□□ -1.58
PTPRD-214ENST00000540109 OR1C1Q15619 314 aa5.2□□□□□ -1.58
PTPRD-214ENST00000540109 LRRC10Q5BKY1 277 aa5.2□□□□□ -1.58
PTPRD-214ENST00000540109 TMEM252Q8N6L7 170 aa5.2□□□□□ -1.58
PTPRD-214ENST00000540109 LRTM2Q8N967 370 aa5.2□□□□□ -1.58
PTPRD-214ENST00000540109 FADS6Q8N9I5 356 aa5.2□□□□□ -1.58
PTPRD-214ENST00000540109 SLC25A38Q96DW6 304 aa5.2□□□□□ -1.58
PTPRD-214ENST00000540109 POM121L2Q96KW2 1035 aa5.2□□□□□ -1.58
PTPRD-214ENST00000540109 KCNK17Q96T54 332 aa5.2□□□□□ -1.58
PTPRD-214ENST00000540109 MESP1Q9BRJ9 268 aa5.2□□□□□ -1.58
PTPRD-214ENST00000540109 NRN1Q9NPD7 142 aa5.2□□□□□ -1.58
PTPRD-214ENST00000540109 FOXD3Q9UJU5 478 aaPredicted RBP5.2□□□□□ -1.58
PTPRD-214ENST00000540109 MRPS18CQ9Y3D5 142 aaKnown RBP5.2□□□□□ -1.58
PTPRD-214ENST00000540109 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.19□□□□□ -1.58
PTPRD-214ENST00000540109 SH2D1BO14796 132 aa5.19□□□□□ -1.58
PTPRD-214ENST00000540109 SRSF10O75494 262 aaKnown RBP5.19□□□□□ -1.58
PTPRD-214ENST00000540109 CFIP05156 583 aa5.19□□□□□ -1.58
PTPRD-214ENST00000540109 SPINK8P0C7L1 97 aa5.19□□□□□ -1.58
PTPRD-214ENST00000540109 KIR2DL2P43627 348 aaPredicted RBP5.19□□□□□ -1.58
PTPRD-214ENST00000540109 SSR4P51571 173 aa5.19□□□□□ -1.58
PTPRD-214ENST00000540109 ZFAND6Q6FIF0 208 aa5.19□□□□□ -1.58
PTPRD-214ENST00000540109 C5orf17Q8NAS9 161 aa5.19□□□□□ -1.58
PTPRD-214ENST00000540109 OR1B1Q8NGR6 318 aa5.19□□□□□ -1.58
PTPRD-214ENST00000540109 THADAQ6YHU6 1953 aa5.19□□□□□ -1.58
PTPRD-214ENST00000540109 NKX2-6A6NCS4 301 aa5.19□□□□□ -1.58
PTPRD-214ENST00000540109 TNFSF11O14788 317 aa5.19□□□□□ -1.58
PTPRD-214ENST00000540109 IGHV2-5P01817 119 aa5.19□□□□□ -1.58
PTPRD-214ENST00000540109 OR9G9P0C7N8 305 aa5.19□□□□□ -1.58
PTPRD-214ENST00000540109 FAM157BP0CG42 384 aa5.19□□□□□ -1.58
PTPRD-214ENST00000540109 ACP1P24666 158 aa5.19□□□□□ -1.58
PTPRD-214ENST00000540109 GPR183P32249 361 aa5.19□□□□□ -1.58
PTPRD-214ENST00000540109 FOXL2P58012 376 aa5.19□□□□□ -1.58
PTPRD-214ENST00000540109 CALHM1Q8IU99 346 aa5.19□□□□□ -1.58
PTPRD-214ENST00000540109 NOXO1Q8NFA2 376 aa5.19□□□□□ -1.58
PTPRD-214ENST00000540109 OR4P4Q8NGL7 312 aa5.19□□□□□ -1.58
PTPRD-214ENST00000540109 SF3B5Q9BWJ5 86 aaKnown RBP5.19□□□□□ -1.58
PTPRD-214ENST00000540109 MRPL32Q9BYC8 188 aaKnown RBP5.19□□□□□ -1.58
PTPRD-214ENST00000540109 TMSB15BA0A087X1C1 80 aa5.19□□□□□ -1.58
PTPRD-214ENST00000540109 LY6G6EA0A0G2JKS1 128 aa5.19□□□□□ -1.58
PTPRD-214ENST00000540109 LOC389332A0A1B0GUA5 103 aa5.19□□□□□ -1.58
PTPRD-214ENST00000540109 A0A1W2PQM1 296 aa5.19□□□□□ -1.58
PTPRD-214ENST00000540109 DHRS3O75911 302 aa5.19□□□□□ -1.58
PTPRD-214ENST00000540109 FCGR3AP08637 254 aa5.19□□□□□ -1.58
PTPRD-214ENST00000540109 DSCR4P56555 118 aaPredicted RBP5.19□□□□□ -1.58
PTPRD-214ENST00000540109 ZFP36L1Q07352 338 aaKnown RBP5.19□□□□□ -1.58
PTPRD-214ENST00000540109 LHFPL4Q7Z7J7 247 aa5.19□□□□□ -1.58
PTPRD-214ENST00000540109 RFLNBQ8N5W9 214 aa5.19□□□□□ -1.58
PTPRD-214ENST00000540109 OR10AC1Q8NH08 325 aa5.19□□□□□ -1.58
PTPRD-214ENST00000540109 C8orf44Q96CB5 159 aa5.19□□□□□ -1.58
PTPRD-214ENST00000540109 MGST2Q99735 147 aa5.19□□□□□ -1.58
PTPRD-214ENST00000540109 SPXQ9BT56 116 aa5.19□□□□□ -1.58
PTPRD-214ENST00000540109 GNB1LQ9BYB4 327 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms