RNA–Protein interactions for RNA: ENST00000539589.5

PACSIN3-211, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PACSIN3, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-211ENST00000539589 HIPK2Q9H2X6 1198 aa16.66■□□□□ 0.26
PACSIN3-211ENST00000539589 SMDT1Q9H4I9 107 aa16.66■□□□□ 0.26
PACSIN3-211ENST00000539589 PPIAL4EA0A075B759 164 aa16.65■□□□□ 0.26
PACSIN3-211ENST00000539589 PPIAL4DF5H284 164 aa16.65■□□□□ 0.26
PACSIN3-211ENST00000539589 PPIAL4FP0DN26 164 aa16.65■□□□□ 0.26
PACSIN3-211ENST00000539589 NDUFB7P17568 137 aa16.65■□□□□ 0.26
PACSIN3-211ENST00000539589 RAB2AP61019 212 aa16.65■□□□□ 0.26
PACSIN3-211ENST00000539589 ATP6V1FQ16864 119 aa16.65■□□□□ 0.26
PACSIN3-211ENST00000539589 SPSB3Q6PJ21 355 aa16.65■□□□□ 0.26
PACSIN3-211ENST00000539589 RSG1Q9BU20 258 aa16.65■□□□□ 0.26
PACSIN3-211ENST00000539589 WDR61Q9GZS3 305 aaKnown RBP16.65■□□□□ 0.26
PACSIN3-211ENST00000539589 PPIAL4AQ9Y536 164 aa16.65■□□□□ 0.26
PACSIN3-211ENST00000539589 HBE1P02100 147 aa16.65■□□□□ 0.26
PACSIN3-211ENST00000539589 SOD3P08294 240 aa16.65■□□□□ 0.26
PACSIN3-211ENST00000539589 NPBWR1P48145 328 aa16.65■□□□□ 0.26
PACSIN3-211ENST00000539589 UTF1Q5T230 341 aa16.65■□□□□ 0.26
PACSIN3-211ENST00000539589 C11orf71Q6IPW1 123 aa16.65■□□□□ 0.26
PACSIN3-211ENST00000539589 SFT2D1Q8WV19 159 aa16.65■□□□□ 0.26
PACSIN3-211ENST00000539589 SLC25A10Q9UBX3 287 aaPredicted RBP16.65■□□□□ 0.26
PACSIN3-211ENST00000539589 LINC00312Q9Y6C7 94 aa16.65■□□□□ 0.26
PACSIN3-211ENST00000539589 A0A1W2PPE3 182 aa16.64■□□□□ 0.25
PACSIN3-211ENST00000539589 LY86O95711 162 aa16.64■□□□□ 0.25
PACSIN3-211ENST00000539589 OR9G9P0C7N8 305 aa16.64■□□□□ 0.25
PACSIN3-211ENST00000539589 NQO2P16083 231 aa16.64■□□□□ 0.25
PACSIN3-211ENST00000539589 ATF4P18848 351 aaPredicted RBP16.64■□□□□ 0.25
PACSIN3-211ENST00000539589 SERF2P84101 59 aa16.64■□□□□ 0.25
PACSIN3-211ENST00000539589 AARDQ4LEZ3 155 aa16.64■□□□□ 0.25
PACSIN3-211ENST00000539589 PRAMEF5Q5TYX0 476 aa16.64■□□□□ 0.25
PACSIN3-211ENST00000539589 OR4S2Q8NH73 311 aa16.64■□□□□ 0.25
PACSIN3-211ENST00000539589 DDB2Q92466 427 aa16.64■□□□□ 0.25
PACSIN3-211ENST00000539589 ZDHHC16Q969W1 377 aa16.64■□□□□ 0.25
PACSIN3-211ENST00000539589 KIAA1456Q9P272 454 aa16.64■□□□□ 0.25
PACSIN3-211ENST00000539589 SAA2-SAA4A0A096LPE2 208 aa16.63■□□□□ 0.25
PACSIN3-211ENST00000539589 LYNX1G3V0Z9 82 aa16.63■□□□□ 0.25
PACSIN3-211ENST00000539589 FCN3O75636 299 aa16.63■□□□□ 0.25
PACSIN3-211ENST00000539589 SAA2P0DJI9 122 aaPredicted RBP16.63■□□□□ 0.25
PACSIN3-211ENST00000539589 LYNX1P0DP58 116 aa16.63■□□□□ 0.25
PACSIN3-211ENST00000539589 THBS3P49746 956 aa16.63■□□□□ 0.25
PACSIN3-211ENST00000539589 CCL20P78556 96 aa16.63■□□□□ 0.25
PACSIN3-211ENST00000539589 MRPS11P82912 194 aaKnown RBP16.63■□□□□ 0.25
PACSIN3-211ENST00000539589 MEF2CQ06413 473 aaPredicted RBP16.63■□□□□ 0.25
PACSIN3-211ENST00000539589 DHRS7BQ6IAN0 325 aaPredicted RBP16.63■□□□□ 0.25
PACSIN3-211ENST00000539589 ZNF439Q8NDP4 499 aa16.63■□□□□ 0.25
PACSIN3-211ENST00000539589 OR4A16Q8NH70 328 aa16.63■□□□□ 0.25
PACSIN3-211ENST00000539589 PINX1Q96BK5 328 aaKnown RBP16.63■□□□□ 0.25
PACSIN3-211ENST00000539589 ADTRPQ96IZ2 230 aa16.63■□□□□ 0.25
PACSIN3-211ENST00000539589 QTRT1Q9BXR0 403 aaKnown RBP16.63■□□□□ 0.25
PACSIN3-211ENST00000539589 SLC35B3Q9H1N7 401 aa16.63■□□□□ 0.25
PACSIN3-211ENST00000539589 IGHV1-69-2A0A0G2JMI3 117 aa16.63■□□□□ 0.25
PACSIN3-211ENST00000539589 LOC105371267A0A1B0GV96 52 aa16.63■□□□□ 0.25
PACSIN3-211ENST00000539589 TNFRSF13BO14836 293 aaPredicted RBP16.63■□□□□ 0.25
PACSIN3-211ENST00000539589 IFNA17P01571 189 aa16.63■□□□□ 0.25
PACSIN3-211ENST00000539589 PPOXP50336 477 aa16.63■□□□□ 0.25
PACSIN3-211ENST00000539589 TMEM88Q6PEY1 159 aa16.63■□□□□ 0.25
PACSIN3-211ENST00000539589 SSX9Q7RTT3 188 aa16.63■□□□□ 0.25
PACSIN3-211ENST00000539589 LYG1Q8N1E2 194 aa16.63■□□□□ 0.25
PACSIN3-211ENST00000539589 CLRN3Q8NCR9 226 aa16.63■□□□□ 0.25
PACSIN3-211ENST00000539589 OR10P1Q8NGE3 313 aa16.63■□□□□ 0.25
PACSIN3-211ENST00000539589 TAF15Q92804 592 aaKnown RBP eCLIP16.63■□□□□ 0.25
PACSIN3-211ENST00000539589 RBMXL1Q96E39 390 aaKnown RBP16.63■□□□□ 0.25
PACSIN3-211ENST00000539589 CBLN4Q9NTU7 201 aa16.63■□□□□ 0.25
PACSIN3-211ENST00000539589 RPUSD1Q9UJJ7 312 aaKnown RBP16.63■□□□□ 0.25
PACSIN3-211ENST00000539589 UBE2L5PA0A1B0GUS4 154 aa16.62■□□□□ 0.25
PACSIN3-211ENST00000539589 RBFOX3A6NFN3 312 aa16.62■□□□□ 0.25
PACSIN3-211ENST00000539589 COL8A2P25067 703 aa16.62■□□□□ 0.25
PACSIN3-211ENST00000539589 SP5Q6BEB4 398 aaPredicted RBP16.62■□□□□ 0.25
PACSIN3-211ENST00000539589 C1orf229Q6ZS94 237 aaPredicted RBP16.62■□□□□ 0.25
PACSIN3-211ENST00000539589 TMEM147Q9BVK8 224 aa16.62■□□□□ 0.25
PACSIN3-211ENST00000539589 GAL3ST2Q9H3Q3 398 aa16.62■□□□□ 0.25
PACSIN3-211ENST00000539589 UBR5O95071 2799 aaPredicted RBP16.62■□□□□ 0.25
PACSIN3-211ENST00000539589 OR2B8PP59922 312 aa16.62■□□□□ 0.25
PACSIN3-211ENST00000539589 SPCS3P61009 180 aa16.62■□□□□ 0.25
PACSIN3-211ENST00000539589 OR10A7Q8NGE5 316 aa16.62■□□□□ 0.25
PACSIN3-211ENST00000539589 ZNF251Q9BRH9 671 aa16.62■□□□□ 0.25
PACSIN3-211ENST00000539589 UTP20O75691 2785 aaKnown RBP16.61■□□□□ 0.25
PACSIN3-211ENST00000539589 AKAP6Q13023 2319 aa16.61■□□□□ 0.25
PACSIN3-211ENST00000539589 TRAV1-1A0A0B4J248 108 aa16.61■□□□□ 0.25
PACSIN3-211ENST00000539589 PMS2P5A8MQ11 134 aa16.61■□□□□ 0.25
PACSIN3-211ENST00000539589 SCAF4O95104 1147 aaKnown RBP16.61■□□□□ 0.25
PACSIN3-211ENST00000539589 GNG10P50151 68 aa16.61■□□□□ 0.25
PACSIN3-211ENST00000539589 RPL31P62899 125 aaKnown RBP16.61■□□□□ 0.25
PACSIN3-211ENST00000539589 SPINK9Q5DT21 86 aa16.61■□□□□ 0.25
PACSIN3-211ENST00000539589 OR52E5Q8NH55 327 aa16.61■□□□□ 0.25
PACSIN3-211ENST00000539589 CLCC1Q96S66 551 aa16.61■□□□□ 0.25
PACSIN3-211ENST00000539589 RARRES2Q99969 163 aa16.61■□□□□ 0.25
PACSIN3-211ENST00000539589 RPRMQ9NS64 109 aa16.61■□□□□ 0.25
PACSIN3-211ENST00000539589 TIMM9Q9Y5J7 89 aa16.61■□□□□ 0.25
PACSIN3-211ENST00000539589 KMT2BQ9UMN6 2715 aaPredicted RBP16.61■□□□□ 0.25
PACSIN3-211ENST00000539589 YLPM1P49750 1951 aaKnown RBP16.61■□□□□ 0.25
PACSIN3-211ENST00000539589 DOCK11Q5JSL3 2073 aa16.6■□□□□ 0.25
PACSIN3-211ENST00000539589 MMP23AO75900 390 aa16.6■□□□□ 0.25
PACSIN3-211ENST00000539589 LYPD2Q6UXB3 125 aa16.6■□□□□ 0.25
PACSIN3-211ENST00000539589 VKORC1L1Q8N0U8 176 aa16.6■□□□□ 0.25
PACSIN3-211ENST00000539589 TMEM140Q9NV12 185 aa16.6■□□□□ 0.25
PACSIN3-211ENST00000539589 GNB2P62879 340 aa16.6■□□□□ 0.25
PACSIN3-211ENST00000539589 RPP30P78346 268 aaKnown RBP16.6■□□□□ 0.25
PACSIN3-211ENST00000539589 SLC25A48Q6ZT89 311 aaKnown RBP16.6■□□□□ 0.25
PACSIN3-211ENST00000539589 DTX2Q86UW9 622 aa16.6■□□□□ 0.25
PACSIN3-211ENST00000539589 CBLN2Q8IUK8 224 aa16.6■□□□□ 0.25
PACSIN3-211ENST00000539589 NDUFB3O43676 98 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms