RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 UBE2G2P60604 165 aa8.04□□□□□ -1.12
CDH13-204ENST00000539548 YPEL3P61236 119 aaPredicted RBP8.04□□□□□ -1.12
CDH13-204ENST00000539548 USF2Q15853 346 aaPredicted RBP8.04□□□□□ -1.12
CDH13-204ENST00000539548 INO80CQ6PI98 192 aaPredicted RBP8.04□□□□□ -1.12
CDH13-204ENST00000539548 TRAT1Q6PIZ9 186 aa8.04□□□□□ -1.12
CDH13-204ENST00000539548 ZNF114Q8NC26 417 aa8.04□□□□□ -1.12
CDH13-204ENST00000539548 OR13A1Q8NGR1 328 aa8.04□□□□□ -1.12
CDH13-204ENST00000539548 SFRP2Q96HF1 295 aa8.04□□□□□ -1.12
CDH13-204ENST00000539548 GMPPAQ96IJ6 420 aaPredicted RBP8.04□□□□□ -1.12
CDH13-204ENST00000539548 DERL1Q9BUN8 251 aa8.04□□□□□ -1.12
CDH13-204ENST00000539548 SPRR3Q9UBC9 169 aa8.04□□□□□ -1.12
CDH13-204ENST00000539548 PSG11Q9UQ72 335 aa8.04□□□□□ -1.12
CDH13-204ENST00000539548 CACNA1DQ01668 2161 aa8.04□□□□□ -1.12
CDH13-204ENST00000539548 TRGV5A0A0B4J1U4 118 aa8.04□□□□□ -1.12
CDH13-204ENST00000539548 PRR33A8MZF0 331 aa8.04□□□□□ -1.12
CDH13-204ENST00000539548 C15orf65H3BRN8 121 aa8.04□□□□□ -1.12
CDH13-204ENST00000539548 SPINT2O43291 252 aa8.04□□□□□ -1.12
CDH13-204ENST00000539548 HPRT1P00492 218 aa8.04□□□□□ -1.12
CDH13-204ENST00000539548 STAG3L2P0CL84 134 aa8.04□□□□□ -1.12
CDH13-204ENST00000539548 STAG3L3P0CL85 134 aa8.04□□□□□ -1.12
CDH13-204ENST00000539548 DUTP33316 252 aaKnown RBP8.04□□□□□ -1.12
CDH13-204ENST00000539548 ERVFC1-1P60608 527 aa8.04□□□□□ -1.12
CDH13-204ENST00000539548 PDLIM3Q53GG5 364 aaPredicted RBP8.04□□□□□ -1.12
CDH13-204ENST00000539548 C1orf194Q5T5A4 169 aa8.04□□□□□ -1.12
CDH13-204ENST00000539548 TREML4Q6UXN2 200 aa8.04□□□□□ -1.12
CDH13-204ENST00000539548 WDR82Q6UXN9 313 aa8.04□□□□□ -1.12
CDH13-204ENST00000539548 OR52E5Q8NH55 327 aa8.04□□□□□ -1.12
CDH13-204ENST00000539548 SGMS2Q8NHU3 365 aa8.04□□□□□ -1.12
CDH13-204ENST00000539548 AURKAIP1Q9NWT8 199 aaPredicted RBP8.04□□□□□ -1.12
CDH13-204ENST00000539548 HCFC1P51610 2035 aa8.03□□□□□ -1.12
CDH13-204ENST00000539548 IGHV3-43A0A0B4J1X8 118 aa8.03□□□□□ -1.12
CDH13-204ENST00000539548 MDFIC2A0A1B0GVS7 189 aa8.03□□□□□ -1.12
CDH13-204ENST00000539548 PRSS46E5RG02 174 aa8.03□□□□□ -1.12
CDH13-204ENST00000539548 RBFOX2O43251 390 aaKnown RBP eCLIP8.03□□□□□ -1.12
CDH13-204ENST00000539548 PROP1O75360 226 aa8.03□□□□□ -1.12
CDH13-204ENST00000539548 SCGB1D1O95968 90 aa8.03□□□□□ -1.12
CDH13-204ENST00000539548 CXorf1O96002 111 aa8.03□□□□□ -1.12
CDH13-204ENST00000539548 ZNF883P0CG24 379 aa8.03□□□□□ -1.12
CDH13-204ENST00000539548 IGHV3-43DP0DP04 118 aa8.03□□□□□ -1.12
CDH13-204ENST00000539548 CD46P15529 392 aa8.03□□□□□ -1.12
CDH13-204ENST00000539548 SSTR5P35346 364 aa8.03□□□□□ -1.12
CDH13-204ENST00000539548 VDAC2P45880 294 aaPredicted RBP8.03□□□□□ -1.12
CDH13-204ENST00000539548 NUTF2P61970 127 aaKnown RBP8.03□□□□□ -1.12
CDH13-204ENST00000539548 CXorf67Q86X51 503 aaPredicted RBP8.03□□□□□ -1.12
CDH13-204ENST00000539548 TGIF2LXQ8IUE1 241 aa8.03□□□□□ -1.12
CDH13-204ENST00000539548 TMEM256Q8N2U0 113 aa8.03□□□□□ -1.12
CDH13-204ENST00000539548 RFESDQ8TAC1 157 aa8.03□□□□□ -1.12
CDH13-204ENST00000539548 NEU1Q99519 415 aa8.03□□□□□ -1.12
CDH13-204ENST00000539548 METRNQ9UJH8 293 aa8.03□□□□□ -1.12
CDH13-204ENST00000539548 MED13Q9UHV7 2174 aa8.03□□□□□ -1.12
CDH13-204ENST00000539548 TRBV20OR9-2A0A075B6H5 130 aa8.03□□□□□ -1.12
CDH13-204ENST00000539548 TRAV9-1A0A075B6T8 112 aa8.03□□□□□ -1.12
CDH13-204ENST00000539548 A0A1W2PNU3 283 aaPredicted RBP8.03□□□□□ -1.12
CDH13-204ENST00000539548 DEFB108AA8MXU0 73 aa8.03□□□□□ -1.12
CDH13-204ENST00000539548 TCAPO15273 167 aa8.03□□□□□ -1.12
CDH13-204ENST00000539548 TFF1P04155 84 aa8.03□□□□□ -1.12
CDH13-204ENST00000539548 ARL14EPLP0DKL9 152 aa8.03□□□□□ -1.12
CDH13-204ENST00000539548 KITLGP21583 273 aa8.03□□□□□ -1.12
CDH13-204ENST00000539548 OR10J1P30954 320 aa8.03□□□□□ -1.12
CDH13-204ENST00000539548 SELENOTP62341 195 aa8.03□□□□□ -1.12
CDH13-204ENST00000539548 TMEM164Q5U3C3 297 aa8.03□□□□□ -1.12
CDH13-204ENST00000539548 TEX38Q6PEX7 206 aa8.03□□□□□ -1.12
CDH13-204ENST00000539548 OR4A16Q8NH70 328 aa8.03□□□□□ -1.12
CDH13-204ENST00000539548 FAM216AQ8WUB2 273 aa8.03□□□□□ -1.12
CDH13-204ENST00000539548 MS4A10Q96PG2 267 aa8.03□□□□□ -1.12
CDH13-204ENST00000539548 MGST2Q99735 147 aa8.03□□□□□ -1.12
CDH13-204ENST00000539548 PATZ1Q9HBE1 687 aaKnown RBP8.03□□□□□ -1.12
CDH13-204ENST00000539548 HEYLQ9NQ87 328 aaPredicted RBP8.03□□□□□ -1.12
CDH13-204ENST00000539548 NAGKQ9UJ70 344 aa8.03□□□□□ -1.12
CDH13-204ENST00000539548 PGPEP1LA6NFU8 196 aa8.02□□□□□ -1.13
CDH13-204ENST00000539548 RRHO14718 337 aa8.02□□□□□ -1.13
CDH13-204ENST00000539548 EREGO14944 169 aa8.02□□□□□ -1.13
CDH13-204ENST00000539548 NUPR1O60356 82 aa8.02□□□□□ -1.13
CDH13-204ENST00000539548 BMP5P22003 454 aa8.02□□□□□ -1.13
CDH13-204ENST00000539548 GCH1P30793 250 aa8.02□□□□□ -1.13
CDH13-204ENST00000539548 TIMP3P35625 211 aa8.02□□□□□ -1.13
CDH13-204ENST00000539548 GPR12P47775 334 aa8.02□□□□□ -1.13
CDH13-204ENST00000539548 SMIM21Q3B7S5 101 aa8.02□□□□□ -1.13
CDH13-204ENST00000539548 RNFT1Q5M7Z0 435 aa8.02□□□□□ -1.13
CDH13-204ENST00000539548 PRAMEF6Q5VXH4 476 aa8.02□□□□□ -1.13
CDH13-204ENST00000539548 TPRX1Q8N7U7 411 aa8.02□□□□□ -1.13
CDH13-204ENST00000539548 OR10G8Q8NGN5 311 aa8.02□□□□□ -1.13
CDH13-204ENST00000539548 OCC1Q8TAD7 63 aa8.02□□□□□ -1.13
CDH13-204ENST00000539548 TMEM204Q9BSN7 226 aa8.02□□□□□ -1.13
CDH13-204ENST00000539548 GGTLC1Q9BX51 225 aa8.02□□□□□ -1.13
CDH13-204ENST00000539548 MS4A5Q9H3V2 200 aa8.02□□□□□ -1.13
CDH13-204ENST00000539548 TUBG2Q9NRH3 451 aa8.02□□□□□ -1.13
CDH13-204ENST00000539548 KIR2DL5BA0A0G2JN68 375 aa8.01□□□□□ -1.13
CDH13-204ENST00000539548 KIR2DL5BA0A0G2JPC4 375 aa8.01□□□□□ -1.13
CDH13-204ENST00000539548 GFRA3O60609 400 aa8.01□□□□□ -1.13
CDH13-204ENST00000539548 FCGR3BO75015 233 aa8.01□□□□□ -1.13
CDH13-204ENST00000539548 LYZL6O75951 148 aa8.01□□□□□ -1.13
CDH13-204ENST00000539548 ADMP35318 185 aa8.01□□□□□ -1.13
CDH13-204ENST00000539548 HOXA4Q00056 320 aaPredicted RBP8.01□□□□□ -1.13
CDH13-204ENST00000539548 ZNF124Q15973 351 aa8.01□□□□□ -1.13
CDH13-204ENST00000539548 ZNF718Q3SXZ3 478 aa8.01□□□□□ -1.13
CDH13-204ENST00000539548 PRAMEF5Q5TYX0 476 aa8.01□□□□□ -1.13
CDH13-204ENST00000539548 MIC13Q5XKP0 118 aa8.01□□□□□ -1.13
CDH13-204ENST00000539548 KIR2DL5AQ8N109 375 aa8.01□□□□□ -1.13
CDH13-204ENST00000539548 CD177Q8N6Q3 437 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms