RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 CTDSP1Q9GZU7 261 aa10.49□□□□□ -0.73
SFSWAP-208ENST00000539506 TMEM9BQ9NQ34 198 aa10.49□□□□□ -0.73
SFSWAP-208ENST00000539506 MANBALQ9NQG1 85 aa10.49□□□□□ -0.73
SFSWAP-208ENST00000539506 MGAQ8IWI9 3026 aa10.49□□□□□ -0.73
SFSWAP-208ENST00000539506 IRF2P14316 349 aa10.49□□□□□ -0.73
SFSWAP-208ENST00000539506 BRWD1-AS2P59051 145 aa10.49□□□□□ -0.73
SFSWAP-208ENST00000539506 GABRA6Q16445 453 aa10.49□□□□□ -0.73
SFSWAP-208ENST00000539506 VKORC1L1Q8N0U8 176 aa10.49□□□□□ -0.73
SFSWAP-208ENST00000539506 KLF14Q8TD94 323 aaPredicted RBP10.49□□□□□ -0.73
SFSWAP-208ENST00000539506 VN1R17PQ8TDU5 208 aa10.49□□□□□ -0.73
SFSWAP-208ENST00000539506 CLCF1Q9UBD9 225 aa10.49□□□□□ -0.73
SFSWAP-208ENST00000539506 FZR1Q9UM11 496 aa10.49□□□□□ -0.73
SFSWAP-208ENST00000539506 CADP27708 2225 aa10.49□□□□□ -0.73
SFSWAP-208ENST00000539506 RBFOX2O43251 390 aaKnown RBP eCLIP10.49□□□□□ -0.73
SFSWAP-208ENST00000539506 S1PR2O95136 353 aa10.49□□□□□ -0.73
SFSWAP-208ENST00000539506 SOX8P57073 446 aa10.49□□□□□ -0.73
SFSWAP-208ENST00000539506 LSM10Q969L4 123 aaKnown RBP10.49□□□□□ -0.73
SFSWAP-208ENST00000539506 OR2D2Q9H210 308 aa10.49□□□□□ -0.73
SFSWAP-208ENST00000539506 IQCF6A8MYZ5 107 aa10.48□□□□□ -0.73
SFSWAP-208ENST00000539506 M0R143 59 aa10.48□□□□□ -0.73
SFSWAP-208ENST00000539506 WT1P19544 449 aaPredicted RBP10.48□□□□□ -0.73
SFSWAP-208ENST00000539506 ADMP35318 185 aa10.48□□□□□ -0.73
SFSWAP-208ENST00000539506 GNB1P62873 340 aa10.48□□□□□ -0.73
SFSWAP-208ENST00000539506 KIAA1644Q3SXP7 199 aa10.48□□□□□ -0.73
SFSWAP-208ENST00000539506 DPPA3Q6W0C5 159 aa10.48□□□□□ -0.73
SFSWAP-208ENST00000539506 TRIB1Q96RU8 372 aa10.48□□□□□ -0.73
SFSWAP-208ENST00000539506 NAGKQ9UJ70 344 aa10.48□□□□□ -0.73
SFSWAP-208ENST00000539506 CEP250Q9BV73 2442 aa10.48□□□□□ -0.73
SFSWAP-208ENST00000539506 C17orf98A8MV24 154 aa10.48□□□□□ -0.73
SFSWAP-208ENST00000539506 HAND1O96004 215 aa10.48□□□□□ -0.73
SFSWAP-208ENST00000539506 SERF2P84101 59 aa10.48□□□□□ -0.73
SFSWAP-208ENST00000539506 GUSBP1Q15486 140 aa10.48□□□□□ -0.73
SFSWAP-208ENST00000539506 IQCJQ1A5X6 159 aa10.48□□□□□ -0.73
SFSWAP-208ENST00000539506 ACTL10Q5JWF8 245 aa10.48□□□□□ -0.73
SFSWAP-208ENST00000539506 VWA1Q6PCB0 445 aa10.48□□□□□ -0.73
SFSWAP-208ENST00000539506 GBGT1Q8N5D6 347 aa10.48□□□□□ -0.73
SFSWAP-208ENST00000539506 LOXL4Q96JB6 756 aa10.48□□□□□ -0.73
SFSWAP-208ENST00000539506 TMEM68Q96MH6 324 aa10.48□□□□□ -0.73
SFSWAP-208ENST00000539506 P2RX4Q99571 388 aa10.48□□□□□ -0.73
SFSWAP-208ENST00000539506 HES4Q9HCC6 221 aa10.48□□□□□ -0.73
SFSWAP-208ENST00000539506 PARD6AQ9NPB6 346 aa10.48□□□□□ -0.73
SFSWAP-208ENST00000539506 METRNQ9UJH8 293 aa10.48□□□□□ -0.73
SFSWAP-208ENST00000539506 A6NJY4 79 aa10.47□□□□□ -0.73
SFSWAP-208ENST00000539506 GCGP01275 180 aa10.47□□□□□ -0.73
SFSWAP-208ENST00000539506 OR3A1P47881 315 aa10.47□□□□□ -0.73
SFSWAP-208ENST00000539506 UBE2NP61088 152 aaKnown RBP10.47□□□□□ -0.73
SFSWAP-208ENST00000539506 AESQ08117 197 aa10.47□□□□□ -0.73
SFSWAP-208ENST00000539506 Q6ZVH6 145 aa10.47□□□□□ -0.73
SFSWAP-208ENST00000539506 ZNF709Q8N972 641 aa10.47□□□□□ -0.73
SFSWAP-208ENST00000539506 FDCSPQ8NFU4 85 aa10.47□□□□□ -0.73
SFSWAP-208ENST00000539506 DCTN5Q9BTE1 182 aa10.47□□□□□ -0.73
SFSWAP-208ENST00000539506 HIPK2Q9H2X6 1198 aa10.47□□□□□ -0.73
SFSWAP-208ENST00000539506 POLDIP2Q9Y2S7 368 aa10.47□□□□□ -0.73
SFSWAP-208ENST00000539506 CACNA1GO43497 2377 aa10.47□□□□□ -0.73
SFSWAP-208ENST00000539506 TRAV34A0A0B4J273 112 aa10.47□□□□□ -0.73
SFSWAP-208ENST00000539506 ODAMA1E959 279 aa10.47□□□□□ -0.73
SFSWAP-208ENST00000539506 C12orf77C9JDV5 145 aa10.47□□□□□ -0.73
SFSWAP-208ENST00000539506 SH2D1BO14796 132 aa10.47□□□□□ -0.73
SFSWAP-208ENST00000539506 HPRT1P00492 218 aa10.47□□□□□ -0.73
SFSWAP-208ENST00000539506 FOXF2Q12947 444 aa10.47□□□□□ -0.73
SFSWAP-208ENST00000539506 WDR31Q8NA23 367 aa10.47□□□□□ -0.73
SFSWAP-208ENST00000539506 RNASEH2CQ8TDP1 164 aaKnown RBP10.47□□□□□ -0.73
SFSWAP-208ENST00000539506 DIRC2Q96SL1 478 aa10.47□□□□□ -0.73
SFSWAP-208ENST00000539506 DMXL2Q8TDJ6 3036 aa10.47□□□□□ -0.73
SFSWAP-208ENST00000539506 MBP02144 154 aa10.47□□□□□ -0.73
SFSWAP-208ENST00000539506 KIR2DL2P43627 348 aaPredicted RBP10.47□□□□□ -0.73
SFSWAP-208ENST00000539506 CCL11P51671 97 aa10.47□□□□□ -0.73
SFSWAP-208ENST00000539506 ERVFC1-1P60608 527 aa10.47□□□□□ -0.73
SFSWAP-208ENST00000539506 EIF4EBP1Q13541 118 aaPredicted RBP10.47□□□□□ -0.73
SFSWAP-208ENST00000539506 FAM214BQ7L5A3 538 aa10.47□□□□□ -0.73
SFSWAP-208ENST00000539506 MOB1BQ7L9L4 216 aa10.47□□□□□ -0.73
SFSWAP-208ENST00000539506 Q8IYB0 196 aa10.47□□□□□ -0.73
SFSWAP-208ENST00000539506 SSMEM1Q8WWF3 244 aa10.47□□□□□ -0.73
SFSWAP-208ENST00000539506 NEIL1Q96FI4 390 aaPredicted RBP10.47□□□□□ -0.73
SFSWAP-208ENST00000539506 COQ2Q96H96 371 aa10.47□□□□□ -0.73
SFSWAP-208ENST00000539506 TDGF1P3P51864 188 aa10.46□□□□□ -0.73
SFSWAP-208ENST00000539506 PRAMEF6Q5VXH4 476 aa10.46□□□□□ -0.73
SFSWAP-208ENST00000539506 CNEP1R1Q8N9A8 125 aa10.46□□□□□ -0.73
SFSWAP-208ENST00000539506 TMEM178AQ8NBL3 297 aa10.46□□□□□ -0.73
SFSWAP-208ENST00000539506 OR10P1Q8NGE3 313 aa10.46□□□□□ -0.73
SFSWAP-208ENST00000539506 HSPB9Q9BQS6 159 aa10.46□□□□□ -0.73
SFSWAP-208ENST00000539506 PSMG3Q9BT73 122 aaPredicted RBP10.46□□□□□ -0.73
SFSWAP-208ENST00000539506 TMEM208Q9BTX3 173 aa10.46□□□□□ -0.73
SFSWAP-208ENST00000539506 OBP2BQ9NPH6 170 aa10.46□□□□□ -0.73
SFSWAP-208ENST00000539506 BSNQ9UPA5 3926 aa10.46□□□□□ -0.74
SFSWAP-208ENST00000539506 ABCA1O95477 2261 aa10.46□□□□□ -0.74
SFSWAP-208ENST00000539506 TRBV20OR9-2A0A075B6H5 130 aa10.46□□□□□ -0.74
SFSWAP-208ENST00000539506 J3QW42 95 aa10.46□□□□□ -0.74
SFSWAP-208ENST00000539506 PAX1P15863 534 aa10.46□□□□□ -0.74
SFSWAP-208ENST00000539506 HLA-DRB5Q30154 266 aa10.46□□□□□ -0.74
SFSWAP-208ENST00000539506 Q6ZT83 130 aa10.46□□□□□ -0.74
SFSWAP-208ENST00000539506 C9orf106Q8NAJ2 232 aa10.46□□□□□ -0.74
SFSWAP-208ENST00000539506 PINX1Q96BK5 328 aaKnown RBP10.46□□□□□ -0.74
SFSWAP-208ENST00000539506 PYGO2Q9BRQ0 406 aa10.46□□□□□ -0.74
SFSWAP-208ENST00000539506 NPCDR1Q9BY65 106 aa10.46□□□□□ -0.74
SFSWAP-208ENST00000539506 RNF114Q9Y508 228 aa10.46□□□□□ -0.74
SFSWAP-208ENST00000539506 CTXND1A0A1B0GTU2 59 aa10.45□□□□□ -0.74
SFSWAP-208ENST00000539506 OR5I1Q13606 314 aa10.45□□□□□ -0.74
SFSWAP-208ENST00000539506 TRIP6Q15654 476 aaKnown RBP10.45□□□□□ -0.74
SFSWAP-208ENST00000539506 DMRTA1Q5VZB9 504 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms