RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 FAM25EA8MYX2 175 aa8.58□□□□□ -1.04
LEMD3-202ENST00000539442 TIMM23O14925 209 aa8.58□□□□□ -1.04
LEMD3-202ENST00000539442 CD5LO43866 347 aa8.58□□□□□ -1.04
LEMD3-202ENST00000539442 VENTXO95231 258 aa8.58□□□□□ -1.04
LEMD3-202ENST00000539442 SIX6O95475 246 aa8.58□□□□□ -1.04
LEMD3-202ENST00000539442 FSHBP01225 129 aa8.58□□□□□ -1.04
LEMD3-202ENST00000539442 IGKV1-5P01602 117 aa8.58□□□□□ -1.04
LEMD3-202ENST00000539442 IGKV1-16P04430 117 aa8.58□□□□□ -1.04
LEMD3-202ENST00000539442 P0C879 139 aa8.58□□□□□ -1.04
LEMD3-202ENST00000539442 IGHV4-38-2P0DP08 117 aa8.58□□□□□ -1.04
LEMD3-202ENST00000539442 LGALS7P47929 136 aa8.58□□□□□ -1.04
LEMD3-202ENST00000539442 SSX2Q16385 188 aa8.58□□□□□ -1.04
LEMD3-202ENST00000539442 IAH1Q2TAA2 248 aaPredicted RBP8.58□□□□□ -1.04
LEMD3-202ENST00000539442 KLF17Q5JT82 389 aaPredicted RBP8.58□□□□□ -1.04
LEMD3-202ENST00000539442 THOC7Q6I9Y2 204 aaKnown RBP8.58□□□□□ -1.04
LEMD3-202ENST00000539442 TCTE3Q8IZS6 198 aa8.58□□□□□ -1.04
LEMD3-202ENST00000539442 NANPQ8TBE9 248 aa8.58□□□□□ -1.04
LEMD3-202ENST00000539442 PPP1R14BQ96C90 147 aa8.58□□□□□ -1.04
LEMD3-202ENST00000539442 AJUBAQ96IF1 538 aa8.58□□□□□ -1.04
LEMD3-202ENST00000539442 HARBI1Q96MB7 349 aa8.58□□□□□ -1.04
LEMD3-202ENST00000539442 NMES1Q9C002 83 aa8.58□□□□□ -1.04
LEMD3-202ENST00000539442 RANBP3Q9H6Z4 567 aaPredicted RBP8.58□□□□□ -1.04
LEMD3-202ENST00000539442 RANGRFQ9HD47 186 aaPredicted RBP8.58□□□□□ -1.04
LEMD3-202ENST00000539442 COA4Q9NYJ1 87 aa8.58□□□□□ -1.04
LEMD3-202ENST00000539442 IGHV3-72A0A0B4J1Y9 119 aa8.57□□□□□ -1.04
LEMD3-202ENST00000539442 MPTX1A8MV57 137 aa8.57□□□□□ -1.04
LEMD3-202ENST00000539442 SHOXO15266 292 aa8.57□□□□□ -1.04
LEMD3-202ENST00000539442 KRASP01116 189 aa8.57□□□□□ -1.04
LEMD3-202ENST00000539442 BRS3P32247 399 aa8.57□□□□□ -1.04
LEMD3-202ENST00000539442 G6PCP35575 357 aa8.57□□□□□ -1.04
LEMD3-202ENST00000539442 DYNLT3P51808 116 aa8.57□□□□□ -1.04
LEMD3-202ENST00000539442 SMCO1Q147U7 214 aa8.57□□□□□ -1.04
LEMD3-202ENST00000539442 LINC01559Q495D7 138 aa8.57□□□□□ -1.04
LEMD3-202ENST00000539442 RUSC1-AS1Q66K80 236 aa8.57□□□□□ -1.04
LEMD3-202ENST00000539442 SPNS3Q6ZMD2 512 aa8.57□□□□□ -1.04
LEMD3-202ENST00000539442 H2BFWTQ7Z2G1 175 aa8.57□□□□□ -1.04
LEMD3-202ENST00000539442 THNSL2Q86YJ6 484 aa8.57□□□□□ -1.04
LEMD3-202ENST00000539442 DYNAPQ8N1N2 210 aa8.57□□□□□ -1.04
LEMD3-202ENST00000539442 ZBTB8BQ8NAP8 495 aaPredicted RBP8.57□□□□□ -1.04
LEMD3-202ENST00000539442 DMBX1Q8NFW5 382 aa8.57□□□□□ -1.04
LEMD3-202ENST00000539442 VSTM2AQ8TAG5 236 aa8.57□□□□□ -1.04
LEMD3-202ENST00000539442 C17orf50Q8WW18 174 aa8.57□□□□□ -1.04
LEMD3-202ENST00000539442 GPR146Q96CH1 333 aa8.57□□□□□ -1.04
LEMD3-202ENST00000539442 OR10C1Q96KK4 312 aa8.57□□□□□ -1.04
LEMD3-202ENST00000539442 RHOVQ96L33 236 aa8.57□□□□□ -1.04
LEMD3-202ENST00000539442 CHIAQ9BZP6 476 aa8.57□□□□□ -1.04
LEMD3-202ENST00000539442 MS4A7Q9GZW8 240 aaPredicted RBP8.57□□□□□ -1.04
LEMD3-202ENST00000539442 MEGF9Q9H1U4 602 aa8.57□□□□□ -1.04
LEMD3-202ENST00000539442 ZFP57Q9NU63 452 aa8.57□□□□□ -1.04
LEMD3-202ENST00000539442 NUP50Q9UKX7 468 aa8.57□□□□□ -1.04
LEMD3-202ENST00000539442 ITPR3Q14573 2671 aa8.57□□□□□ -1.04
LEMD3-202ENST00000539442 NOTCH2Q04721 2471 aa8.56□□□□□ -1.04
LEMD3-202ENST00000539442 IGHV3OR16-10A0A075B7F0 116 aa8.56□□□□□ -1.04
LEMD3-202ENST00000539442 A0A0G2JRQ6 117 aa8.56□□□□□ -1.04
LEMD3-202ENST00000539442 SPDEFO95238 335 aa8.56□□□□□ -1.04
LEMD3-202ENST00000539442 MOSP00540 346 aa8.56□□□□□ -1.04
LEMD3-202ENST00000539442 FGF2P09038 288 aa8.56□□□□□ -1.04
LEMD3-202ENST00000539442 FBP1P09467 338 aa8.56□□□□□ -1.04
LEMD3-202ENST00000539442 RPS16P62249 146 aaKnown RBP8.56□□□□□ -1.04
LEMD3-202ENST00000539442 KRTAP1-1Q07627 177 aa8.56□□□□□ -1.04
LEMD3-202ENST00000539442 FGL1Q08830 312 aa8.56□□□□□ -1.04
LEMD3-202ENST00000539442 IL15RAQ13261 267 aa8.56□□□□□ -1.04
LEMD3-202ENST00000539442 EBI3Q14213 229 aa8.56□□□□□ -1.04
LEMD3-202ENST00000539442 AANATQ16613 207 aa8.56□□□□□ -1.04
LEMD3-202ENST00000539442 VMA21Q3ZAQ7 101 aa8.56□□□□□ -1.04
LEMD3-202ENST00000539442 BRD3OSQ6XYD6 125 aa8.56□□□□□ -1.04
LEMD3-202ENST00000539442 C9orf139Q6ZV77 190 aa8.56□□□□□ -1.04
LEMD3-202ENST00000539442 OR4D5Q8NGN0 318 aa8.56□□□□□ -1.04
LEMD3-202ENST00000539442 OR2T10Q8NGZ9 312 aa8.56□□□□□ -1.04
LEMD3-202ENST00000539442 OR4A5Q8NH83 315 aa8.56□□□□□ -1.04
LEMD3-202ENST00000539442 FYTTD1Q96QD9 318 aaKnown RBP8.56□□□□□ -1.04
LEMD3-202ENST00000539442 TSNAXQ99598 290 aaKnown RBP8.56□□□□□ -1.04
LEMD3-202ENST00000539442 TMEM140Q9NV12 185 aa8.56□□□□□ -1.04
LEMD3-202ENST00000539442 BET1LQ9NYM9 111 aa8.56□□□□□ -1.04
LEMD3-202ENST00000539442 CACNG5Q9UF02 275 aa8.56□□□□□ -1.04
LEMD3-202ENST00000539442 CACFD1Q9UGQ2 172 aa8.56□□□□□ -1.04
LEMD3-202ENST00000539442 FAM96BQ9Y3D0 163 aa8.56□□□□□ -1.04
LEMD3-202ENST00000539442 VPS13CQ709C8 3753 aa8.55□□□□□ -1.04
LEMD3-202ENST00000539442 A0A0U1RQK1 487 aa8.55□□□□□ -1.04
LEMD3-202ENST00000539442 FAM90A26D6RGX4 464 aa8.55□□□□□ -1.04
LEMD3-202ENST00000539442 PITX3O75364 302 aa8.55□□□□□ -1.04
LEMD3-202ENST00000539442 SNRNP70P08621 437 aaKnown RBP8.55□□□□□ -1.04
LEMD3-202ENST00000539442 IL6RP08887 468 aaPredicted RBP8.55□□□□□ -1.04
LEMD3-202ENST00000539442 FAM106CPP0CH98 169 aa8.55□□□□□ -1.04
LEMD3-202ENST00000539442 PET100P0DJ07 73 aa8.55□□□□□ -1.04
LEMD3-202ENST00000539442 SAA1P0DJI8 122 aaPredicted RBP8.55□□□□□ -1.04
LEMD3-202ENST00000539442 UBE2KP61086 200 aa8.55□□□□□ -1.04
LEMD3-202ENST00000539442 AARDQ4LEZ3 155 aa8.55□□□□□ -1.04
LEMD3-202ENST00000539442 OR4A47Q6IF82 309 aa8.55□□□□□ -1.04
LEMD3-202ENST00000539442 SSX9Q7RTT3 188 aa8.55□□□□□ -1.04
LEMD3-202ENST00000539442 FOXRED2Q8IWF2 684 aa8.55□□□□□ -1.04
LEMD3-202ENST00000539442 PUSL1Q8N0Z8 303 aaKnown RBP8.55□□□□□ -1.04
LEMD3-202ENST00000539442 OR2T35Q8NGX2 323 aa8.55□□□□□ -1.04
LEMD3-202ENST00000539442 OR1S1Q8NH92 325 aa8.55□□□□□ -1.04
LEMD3-202ENST00000539442 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.55□□□□□ -1.04
LEMD3-202ENST00000539442 TMEM160Q9NX00 188 aa8.55□□□□□ -1.04
LEMD3-202ENST00000539442 GSKIPQ9P0R6 139 aa8.55□□□□□ -1.04
LEMD3-202ENST00000539442 ABCA1O95477 2261 aa8.54□□□□□ -1.04
LEMD3-202ENST00000539442 SRRM4A7MD48 611 aaKnown RBP8.54□□□□□ -1.04
LEMD3-202ENST00000539442 SNAPC5O75971 98 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms