RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 CD40LGP29965 261 aa12.13□□□□□ -0.47
CIT-210ENST00000539413 PRSS3P35030 304 aa12.13□□□□□ -0.47
CIT-210ENST00000539413 ALDH3B2P48448 385 aa12.13□□□□□ -0.47
CIT-210ENST00000539413 RORCP51449 518 aa12.13□□□□□ -0.47
CIT-210ENST00000539413 TNXAQ16473 311 aa12.13□□□□□ -0.47
CIT-210ENST00000539413 ZNF66Q6ZN08 573 aa12.13□□□□□ -0.47
CIT-210ENST00000539413 VKORC1L1Q8N0U8 176 aa12.13□□□□□ -0.47
CIT-210ENST00000539413 OR4S2Q8NH73 311 aa12.13□□□□□ -0.47
CIT-210ENST00000539413 GIMAP1Q8WWP7 306 aa12.13□□□□□ -0.47
CIT-210ENST00000539413 ACOT12Q8WYK0 555 aa12.13□□□□□ -0.47
CIT-210ENST00000539413 CMTM3Q96MX0 182 aa12.13□□□□□ -0.47
CIT-210ENST00000539413 SLC5A7Q9GZV3 580 aa12.13□□□□□ -0.47
CIT-210ENST00000539413 SLA2Q9H6Q3 261 aa12.13□□□□□ -0.47
CIT-210ENST00000539413 ZNF355PQ9NSJ1 428 aa12.13□□□□□ -0.47
CIT-210ENST00000539413 EHFQ9NZC4 300 aa12.13□□□□□ -0.47
CIT-210ENST00000539413 DNAH3Q8TD57 4116 aa12.13□□□□□ -0.47
CIT-210ENST00000539413 WI2-2373I1.2A0A1W2PRP0 233 aa12.12□□□□□ -0.47
CIT-210ENST00000539413 MSGN1A6NI15 193 aa12.12□□□□□ -0.47
CIT-210ENST00000539413 K7EIL1 84 aa12.12□□□□□ -0.47
CIT-210ENST00000539413 PMP2P02689 132 aa12.12□□□□□ -0.47
CIT-210ENST00000539413 TRGV3P03979 118 aa12.12□□□□□ -0.47
CIT-210ENST00000539413 APELAP0DMC3 54 aa12.12□□□□□ -0.47
CIT-210ENST00000539413 NAT1P18440 290 aa12.12□□□□□ -0.47
CIT-210ENST00000539413 RFX2P48378 723 aa12.12□□□□□ -0.47
CIT-210ENST00000539413 MSMO1Q15800 293 aa12.12□□□□□ -0.47
CIT-210ENST00000539413 POC5Q8NA72 575 aa12.12□□□□□ -0.47
CIT-210ENST00000539413 PHB2Q99623 299 aa12.12□□□□□ -0.47
CIT-210ENST00000539413 ZNF430Q9H8G1 570 aaPredicted RBP12.12□□□□□ -0.47
CIT-210ENST00000539413 IGHV4OR15-8A0A075B7B6 117 aa12.11□□□□□ -0.47
CIT-210ENST00000539413 A0A087WW49 117 aa12.11□□□□□ -0.47
CIT-210ENST00000539413 SMIM31A0A1B0GVY4 71 aa12.11□□□□□ -0.47
CIT-210ENST00000539413 SEC14L6B5MCN3 397 aa12.11□□□□□ -0.47
CIT-210ENST00000539413 SLURP1P55000 103 aa12.11□□□□□ -0.47
CIT-210ENST00000539413 DYRK1AQ13627 763 aa12.11□□□□□ -0.47
CIT-210ENST00000539413 C9orf66Q5T8R8 295 aa12.11□□□□□ -0.47
CIT-210ENST00000539413 ZNF818PQ6ZRF7 136 aa12.11□□□□□ -0.47
CIT-210ENST00000539413 GPR141Q7Z602 305 aa12.11□□□□□ -0.47
CIT-210ENST00000539413 TMEM17Q86X19 198 aa12.11□□□□□ -0.47
CIT-210ENST00000539413 SNX29P2Q8IUI4 249 aa12.11□□□□□ -0.47
CIT-210ENST00000539413 ZBTB34Q8NCN2 500 aa12.11□□□□□ -0.47
CIT-210ENST00000539413 GPX8Q8TED1 209 aa12.11□□□□□ -0.47
CIT-210ENST00000539413 SRSF12Q8WXF0 261 aaKnown RBP12.11□□□□□ -0.47
CIT-210ENST00000539413 RHOVQ96L33 236 aa12.11□□□□□ -0.47
CIT-210ENST00000539413 TMEM68Q96MH6 324 aa12.11□□□□□ -0.47
CIT-210ENST00000539413 LINC01619G3V211 115 aa12.1□□□□□ -0.47
CIT-210ENST00000539413 H3BUA1 57 aa12.1□□□□□ -0.47
CIT-210ENST00000539413 SULT1C2O00338 296 aa12.1□□□□□ -0.47
CIT-210ENST00000539413 RAMP3O60896 148 aa12.1□□□□□ -0.47
CIT-210ENST00000539413 ZNF182P17025 639 aaPredicted RBP12.1□□□□□ -0.47
CIT-210ENST00000539413 TAS2R46P59540 309 aa12.1□□□□□ -0.47
CIT-210ENST00000539413 HERV-K104P61576 105 aa12.1□□□□□ -0.47
CIT-210ENST00000539413 C10orf55Q5SWW7 151 aa12.1□□□□□ -0.47
CIT-210ENST00000539413 DHRS11Q6UWP2 260 aa12.1□□□□□ -0.47
CIT-210ENST00000539413 LYSMD2Q8IV50 215 aa12.1□□□□□ -0.47
CIT-210ENST00000539413 MMD2Q8IY49 270 aa12.1□□□□□ -0.47
CIT-210ENST00000539413 OR5H2Q8NGV7 314 aa12.1□□□□□ -0.47
CIT-210ENST00000539413 DCUN1D4Q92564 292 aa12.1□□□□□ -0.47
CIT-210ENST00000539413 ZNF2Q9BSG1 426 aaPredicted RBP12.1□□□□□ -0.47
CIT-210ENST00000539413 FAM25AB3EWG3 89 aa12.09□□□□□ -0.47
CIT-210ENST00000539413 FAM25CB3EWG5 89 aa12.09□□□□□ -0.47
CIT-210ENST00000539413 FAM25GB3EWG6 89 aa12.09□□□□□ -0.47
CIT-210ENST00000539413 CREBL2O60519 120 aaPredicted RBP12.09□□□□□ -0.47
CIT-210ENST00000539413 ACTL6BO94805 426 aa12.09□□□□□ -0.47
CIT-210ENST00000539413 OR2A4O95047 310 aa12.09□□□□□ -0.47
CIT-210ENST00000539413 HLA-DMAP28067 261 aa12.09□□□□□ -0.47
CIT-210ENST00000539413 GNRHRP30968 328 aa12.09□□□□□ -0.47
CIT-210ENST00000539413 KIR2DS2P43631 304 aa12.09□□□□□ -0.47
CIT-210ENST00000539413 DEFA5Q01523 94 aa12.09□□□□□ -0.47
CIT-210ENST00000539413 MZT2AQ6P582 158 aa12.09□□□□□ -0.47
CIT-210ENST00000539413 SPAG16Q8N0X2 631 aa12.09□□□□□ -0.47
CIT-210ENST00000539413 PUSL1Q8N0Z8 303 aaKnown RBP12.09□□□□□ -0.47
CIT-210ENST00000539413 AP3S1Q92572 193 aa12.09□□□□□ -0.47
CIT-210ENST00000539413 DLX4Q92988 240 aaPredicted RBP12.09□□□□□ -0.47
CIT-210ENST00000539413 MOB3AQ96BX8 217 aa12.09□□□□□ -0.47
CIT-210ENST00000539413 OR2A7Q96R45 310 aa12.09□□□□□ -0.47
CIT-210ENST00000539413 SCPEP1Q9HB40 452 aa12.09□□□□□ -0.47
CIT-210ENST00000539413 COA4Q9NYJ1 87 aa12.09□□□□□ -0.47
CIT-210ENST00000539413 SCOCQ9UIL1 159 aa12.09□□□□□ -0.47
CIT-210ENST00000539413 OVOL1O14753 267 aa12.08□□□□□ -0.48
CIT-210ENST00000539413 MPPED1O15442 326 aa12.08□□□□□ -0.48
CIT-210ENST00000539413 KBTBD11O94819 623 aa12.08□□□□□ -0.48
CIT-210ENST00000539413 BRI3O95415 125 aa12.08□□□□□ -0.48
CIT-210ENST00000539413 HRASP01112 189 aa12.08□□□□□ -0.48
CIT-210ENST00000539413 HSPB1P04792 205 aaKnown RBP12.08□□□□□ -0.48
CIT-210ENST00000539413 OR9G9P0C7N8 305 aa12.08□□□□□ -0.48
CIT-210ENST00000539413 HRH1P35367 487 aa12.08□□□□□ -0.48
CIT-210ENST00000539413 DGCR2P98153 550 aa12.08□□□□□ -0.48
CIT-210ENST00000539413 CATR1Q13166 79 aa12.08□□□□□ -0.48
CIT-210ENST00000539413 SPCS2Q15005 226 aa12.08□□□□□ -0.48
CIT-210ENST00000539413 SSX9Q7RTT3 188 aa12.08□□□□□ -0.48
CIT-210ENST00000539413 ADAD2Q8NCV1 583 aaKnown RBP12.08□□□□□ -0.48
CIT-210ENST00000539413 VSTM2AQ8TAG5 236 aa12.08□□□□□ -0.48
CIT-210ENST00000539413 TMEM167AQ8TBQ9 72 aa12.08□□□□□ -0.48
CIT-210ENST00000539413 TINAGL1Q9GZM7 467 aaPredicted RBP12.08□□□□□ -0.48
CIT-210ENST00000539413 FXYD6Q9H0Q3 95 aa12.08□□□□□ -0.48
CIT-210ENST00000539413 C13orf42A0A1B0GVH6 325 aa12.07□□□□□ -0.48
CIT-210ENST00000539413 RBFOX2O43251 390 aaKnown RBP eCLIP12.07□□□□□ -0.48
CIT-210ENST00000539413 RBMXL2O75526 392 aaKnown RBP12.07□□□□□ -0.48
CIT-210ENST00000539413 RNASE12Q5GAN4 147 aaKnown RBP12.07□□□□□ -0.48
CIT-210ENST00000539413 AADACL3Q5VUY0 350 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms