RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 MEPEQ9NQ76 525 aaPredicted RBP1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 ZNF71Q9NQZ8 489 aaPredicted RBP1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 UBQLN4Q9NRR5 601 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 SPANXB1Q9NS25 103 aaPredicted RBP1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 SPANXA1Q9NS26 97 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 ACER3Q9NUN7 267 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 ASF1BQ9NVP2 202 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 CALML5Q9NZT1 146 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 THYN1Q9P016 225 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 MED11Q9P086 117 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 DOK5Q9P104 306 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 ZNF107Q9UII5 783 aaPredicted RBP1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 RIMS3Q9UJD0 308 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 SCP2D1Q9UJQ7 156 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 FZR1Q9UM11 496 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 POMPQ9Y244 141 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 POLDIP2Q9Y2S7 368 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 OR2W1Q9Y3N9 320 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 PYGO1Q9Y3Y4 419 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 UGT2A1Q9Y4X1 527 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 LSM5Q9Y4Y9 91 aaKnown RBP1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 ETV7Q9Y603 341 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 A3GALT2U3KPV4 340 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 NAV3Q8IVL0 2385 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 NF1P21359 2839 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 DSCAML1Q8TD84 2053 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 DSCAMO60469 2012 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 IGLV5-45A0A087WSX0 123 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 A0A087WUU8 490 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 TRGV5A0A0B4J1U4 118 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 IGKV1D-43A0A0B4J1Z2 117 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 A0A1B0GTH9 108 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 A0A1B0GWA3 101 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 A0A1W2PPK0 400 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 A0A1W2PPR1 153 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 MAP1LC3B2A6NCE7 125 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 LINC00862A6NCI5 91 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 ZNF724A8MTY0 619 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 A8MVM7 634 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 KRBOX1C9JBD0 128 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 RPL36A-HNRNPH2H7BZ11 118 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 PLPP3O14495 311 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 CDC42EP2O14613 210 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 CHST1O43916 411 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 OR7C2O60412 319 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 CDC40O60508 579 aaKnown RBP eCLIP1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 RAMP1O60894 148 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 SS18L1O75177 396 aaPredicted RBP1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 REM1O75628 298 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 SNAPC5O75971 98 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 GADD45GO95257 159 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 CPSF4O95639 269 aaKnown RBP1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 CLIC3O95833 236 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 IGHV4-39P01824 125 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 IGF1P05019 195 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 GKN3PP0CG01 181 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 UBBP0CG47 229 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 C8orf88P0DMB2 117 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 IRF2P14316 349 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 ZNF43P17038 809 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 TBPP20226 339 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 ALOX5APP20292 161 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 USF1P22415 310 aaPredicted RBP1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 FKBP2P26885 142 aaKnown RBP1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 SFTPDP35247 375 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 GGT2P36268 569 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 MDH2P40926 338 aaKnown RBP1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 APOBEC1P41238 236 aaKnown RBP1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 NKX2-1P43699 371 aaPredicted RBP1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 LGALS7P47929 136 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 RORCP51449 518 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 HNRNPA3P51991 378 aaKnown RBP1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 EMP1P54849 157 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 PAX9P55771 341 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 DLX6P56179 175 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 OR10A3P58181 314 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 SEC61BP60468 96 aaKnown RBP1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 RHOBP62745 196 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 RPL31P62899 125 aaKnown RBP1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 HOXC5Q00444 222 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 TGFBR3Q03167 851 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 BAXQ07812 192 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 CD300CQ08708 224 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 SMAGPQ0VAQ4 97 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 GAGE5Q13069 117 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 GAGE6Q13070 117 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 EDDM3AQ14507 147 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 GNMTQ14749 295 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 ZNF846Q147U1 533 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 SLC10A1Q14973 349 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 C3AR1Q16581 482 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 TBC1D28Q2M2D7 210 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 LRRC75BQ2VPJ9 315 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 CYBRD1Q53TN4 286 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 OCIAD2Q56VL3 154 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 SYT14P1Q58G82 188 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 TMEM97Q5BJF2 176 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 DNLZQ5SXM8 178 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 AKR1C8PQ5T2L2 129 aa1.47□□□□□ -2.17
CBX3P4-201ENST00000538909 C1orf195Q5TG92 126 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms