RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 RPL39P5Q59GN2 51 aa11.87□□□□□ -0.51
USP44-203ENST00000537435 BHLHA15Q7RTS1 189 aaPredicted RBP11.87□□□□□ -0.51
USP44-203ENST00000537435 LRP11Q86VZ4 500 aa11.87□□□□□ -0.51
USP44-203ENST00000537435 FAM90A1Q86YD7 464 aa11.87□□□□□ -0.51
USP44-203ENST00000537435 TGIF2LYQ8IUE0 185 aa11.87□□□□□ -0.51
USP44-203ENST00000537435 VKORC1L1Q8N0U8 176 aa11.87□□□□□ -0.51
USP44-203ENST00000537435 OR5T1Q8NG75 326 aa11.87□□□□□ -0.51
USP44-203ENST00000537435 ANAPC16Q96DE5 110 aa11.87□□□□□ -0.51
USP44-203ENST00000537435 PACRGQ96M98 296 aaPredicted RBP11.87□□□□□ -0.51
USP44-203ENST00000537435 HIST1H2BLQ99880 126 aa11.87□□□□□ -0.51
USP44-203ENST00000537435 PCGF1Q9BSM1 259 aa11.87□□□□□ -0.51
USP44-203ENST00000537435 PRDM13Q9H4Q3 707 aa11.87□□□□□ -0.51
USP44-203ENST00000537435 A0A1W2PPQ1 181 aa11.87□□□□□ -0.51
USP44-203ENST00000537435 MGST3O14880 152 aa11.87□□□□□ -0.51
USP44-203ENST00000537435 YPEL1O60688 119 aa11.87□□□□□ -0.51
USP44-203ENST00000537435 CRYAAP02489 173 aa11.87□□□□□ -0.51
USP44-203ENST00000537435 SPCS3P61009 180 aa11.87□□□□□ -0.51
USP44-203ENST00000537435 ALKBH2Q6NS38 261 aa11.87□□□□□ -0.51
USP44-203ENST00000537435 LURAP1LQ8IV03 231 aa11.87□□□□□ -0.51
USP44-203ENST00000537435 STARD4Q96DR4 205 aa11.87□□□□□ -0.51
USP44-203ENST00000537435 YPEL2Q96QA6 119 aa11.87□□□□□ -0.51
USP44-203ENST00000537435 RRHO14718 337 aa11.86□□□□□ -0.51
USP44-203ENST00000537435 UBE2G2P60604 165 aa11.86□□□□□ -0.51
USP44-203ENST00000537435 RPP30P78346 268 aaKnown RBP11.86□□□□□ -0.51
USP44-203ENST00000537435 TMEM183AQ8IXX5 376 aa11.86□□□□□ -0.51
USP44-203ENST00000537435 GCSAMQ8N6F7 178 aa11.86□□□□□ -0.51
USP44-203ENST00000537435 ZNRF1Q8ND25 227 aa11.86□□□□□ -0.51
USP44-203ENST00000537435 PPP1R35Q8TAP8 253 aa11.86□□□□□ -0.51
USP44-203ENST00000537435 HEYLQ9NQ87 328 aaPredicted RBP11.86□□□□□ -0.51
USP44-203ENST00000537435 DKK4Q9UBT3 224 aa11.86□□□□□ -0.51
USP44-203ENST00000537435 A0A1W2PPV4 95 aa11.86□□□□□ -0.51
USP44-203ENST00000537435 FAM90A9PA6NNJ1 464 aa11.86□□□□□ -0.51
USP44-203ENST00000537435 VENTXO95231 258 aa11.86□□□□□ -0.51
USP44-203ENST00000537435 CGAP01215 116 aa11.86□□□□□ -0.51
USP44-203ENST00000537435 ATP5G3P48201 142 aa11.86□□□□□ -0.51
USP44-203ENST00000537435 ZNF134P52741 427 aa11.86□□□□□ -0.51
USP44-203ENST00000537435 ERVK-16P61578 105 aa11.86□□□□□ -0.51
USP44-203ENST00000537435 SPRNQ5BIV9 151 aa11.86□□□□□ -0.51
USP44-203ENST00000537435 PATZ1Q9HBE1 687 aaKnown RBP11.86□□□□□ -0.51
USP44-203ENST00000537435 GFOD1Q9NXC2 390 aa11.86□□□□□ -0.51
USP44-203ENST00000537435 SLC25A15Q9Y619 301 aa11.86□□□□□ -0.51
USP44-203ENST00000537435 PRRC2CQ9Y520 2896 aaKnown RBP11.85□□□□□ -0.51
USP44-203ENST00000537435 TRAV3A0A0B4J244 114 aa11.85□□□□□ -0.51
USP44-203ENST00000537435 LY86O95711 162 aa11.85□□□□□ -0.51
USP44-203ENST00000537435 VDAC2P45880 294 aaPredicted RBP11.85□□□□□ -0.51
USP44-203ENST00000537435 LOXL3P58215 753 aa11.85□□□□□ -0.51
USP44-203ENST00000537435 GNB1P62873 340 aa11.85□□□□□ -0.51
USP44-203ENST00000537435 GAMTQ14353 236 aa11.85□□□□□ -0.51
USP44-203ENST00000537435 CST9LP1Q5W188 147 aa11.85□□□□□ -0.51
USP44-203ENST00000537435 TREML4Q6UXN2 200 aa11.85□□□□□ -0.51
USP44-203ENST00000537435 RAB1CQ92928 201 aa11.85□□□□□ -0.51
USP44-203ENST00000537435 MEGF10Q96KG7 1140 aa11.85□□□□□ -0.51
USP44-203ENST00000537435 S1PR3Q99500 378 aa11.85□□□□□ -0.51
USP44-203ENST00000537435 IFI27L2Q9H2X8 130 aa11.85□□□□□ -0.51
USP44-203ENST00000537435 PTPRBP23467 1997 aa11.85□□□□□ -0.51
USP44-203ENST00000537435 AHRRA9YTQ3 701 aa11.85□□□□□ -0.51
USP44-203ENST00000537435 P2RY6Q15077 328 aa11.85□□□□□ -0.51
USP44-203ENST00000537435 CR1LQ2VPA4 569 aa11.85□□□□□ -0.51
USP44-203ENST00000537435 C1orf174Q8IYL3 243 aa11.85□□□□□ -0.51
USP44-203ENST00000537435 OR52E5Q8NH55 327 aa11.85□□□□□ -0.51
USP44-203ENST00000537435 OR2V2Q96R30 315 aa11.85□□□□□ -0.51
USP44-203ENST00000537435 CACNA1GO43497 2377 aa11.84□□□□□ -0.51
USP44-203ENST00000537435 SLC31A2O15432 143 aa11.84□□□□□ -0.51
USP44-203ENST00000537435 RBFOX2O43251 390 aaKnown RBP eCLIP11.84□□□□□ -0.51
USP44-203ENST00000537435 PDE6DO43924 150 aa11.84□□□□□ -0.51
USP44-203ENST00000537435 GFRA3O60609 400 aa11.84□□□□□ -0.51
USP44-203ENST00000537435 MPDU1O75352 247 aa11.84□□□□□ -0.51
USP44-203ENST00000537435 ZNF83P51522 516 aa11.84□□□□□ -0.51
USP44-203ENST00000537435 FAM3BP58499 235 aaPredicted RBP11.84□□□□□ -0.51
USP44-203ENST00000537435 RELBQ01201 579 aa11.84□□□□□ -0.51
USP44-203ENST00000537435 MOGAT3Q86VF5 341 aa11.84□□□□□ -0.51
USP44-203ENST00000537435 ABHD12Q8N2K0 398 aa11.84□□□□□ -0.51
USP44-203ENST00000537435 OR2T10Q8NGZ9 312 aa11.84□□□□□ -0.51
USP44-203ENST00000537435 OR1P1Q8NH06 330 aa11.84□□□□□ -0.51
USP44-203ENST00000537435 MS4A5Q9H3V2 200 aa11.84□□□□□ -0.51
USP44-203ENST00000537435 TMEM140Q9NV12 185 aa11.84□□□□□ -0.51
USP44-203ENST00000537435 ZMAT5Q9UDW3 170 aaKnown RBP11.84□□□□□ -0.51
USP44-203ENST00000537435 PRSS46E5RG02 174 aa11.84□□□□□ -0.51
USP44-203ENST00000537435 F2RL2O00254 374 aa11.84□□□□□ -0.51
USP44-203ENST00000537435 GGCTO75223 188 aaKnown RBP11.84□□□□□ -0.51
USP44-203ENST00000537435 CHRNA7P36544 502 aa11.84□□□□□ -0.51
USP44-203ENST00000537435 TMEM249Q2WGJ8 235 aa11.84□□□□□ -0.51
USP44-203ENST00000537435 DNLZQ5SXM8 178 aa11.84□□□□□ -0.51
USP44-203ENST00000537435 UTF1Q5T230 341 aa11.84□□□□□ -0.51
USP44-203ENST00000537435 C1orf229Q6ZS94 237 aaPredicted RBP11.84□□□□□ -0.51
USP44-203ENST00000537435 SEM1Q6ZVN7 128 aa11.84□□□□□ -0.51
USP44-203ENST00000537435 LINC01551Q86U37 167 aa11.84□□□□□ -0.51
USP44-203ENST00000537435 S100PBPQ96BU1 408 aa11.84□□□□□ -0.51
USP44-203ENST00000537435 SDSLQ96GA7 329 aa11.84□□□□□ -0.51
USP44-203ENST00000537435 MGST2Q99735 147 aa11.84□□□□□ -0.51
USP44-203ENST00000537435 AURKAIP1Q9NWT8 199 aaPredicted RBP11.84□□□□□ -0.51
USP44-203ENST00000537435 XKRY2A2RUG3 117 aa11.83□□□□□ -0.52
USP44-203ENST00000537435 GALR2O43603 387 aaPredicted RBP11.83□□□□□ -0.52
USP44-203ENST00000537435 SOX15O60248 233 aa11.83□□□□□ -0.52
USP44-203ENST00000537435 CFHR2P36980 270 aa11.83□□□□□ -0.52
USP44-203ENST00000537435 SRP14P37108 136 aaKnown RBP11.83□□□□□ -0.52
USP44-203ENST00000537435 OPRK1P41145 380 aa11.83□□□□□ -0.52
USP44-203ENST00000537435 PDLIM3Q53GG5 364 aaPredicted RBP11.83□□□□□ -0.52
USP44-203ENST00000537435 MIC13Q5XKP0 118 aa11.83□□□□□ -0.52
USP44-203ENST00000537435 FAM216AQ8WUB2 273 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms