RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 PKIBQ9C010 78 aa9.16□□□□□ -0.94
CLIP1-209ENST00000537178 KCNE5Q9UJ90 142 aa9.16□□□□□ -0.94
CLIP1-209ENST00000537178 ZDHHC8Q9ULC8 765 aa9.16□□□□□ -0.94
CLIP1-209ENST00000537178 YBX2Q9Y2T7 364 aaKnown RBP9.16□□□□□ -0.94
CLIP1-209ENST00000537178 KIF26AQ9ULI4 1882 aaPredicted RBP9.16□□□□□ -0.94
CLIP1-209ENST00000537178 IGKV3D-11A0A0A0MRZ8 115 aa9.16□□□□□ -0.94
CLIP1-209ENST00000537178 A0A1W2PPV9 198 aa9.16□□□□□ -0.94
CLIP1-209ENST00000537178 ODAMA1E959 279 aa9.16□□□□□ -0.94
CLIP1-209ENST00000537178 C1QL1O75973 258 aa9.16□□□□□ -0.94
CLIP1-209ENST00000537178 IGKV3-11P04433 115 aa9.16□□□□□ -0.94
CLIP1-209ENST00000537178 CXCL2P19875 107 aa9.16□□□□□ -0.94
CLIP1-209ENST00000537178 DDTP30046 118 aa9.16□□□□□ -0.94
CLIP1-209ENST00000537178 DCAF12L2Q5VW00 463 aa9.16□□□□□ -0.94
CLIP1-209ENST00000537178 MBNL2Q5VZF2 373 aaKnown RBP9.16□□□□□ -0.94
CLIP1-209ENST00000537178 PCSK4Q6UW60 755 aa9.16□□□□□ -0.94
CLIP1-209ENST00000537178 NUP37Q8NFH4 326 aa9.16□□□□□ -0.94
CLIP1-209ENST00000537178 OR13C6PQ8NH95 151 aa9.16□□□□□ -0.94
CLIP1-209ENST00000537178 ZNF721Q8TF20 911 aa9.16□□□□□ -0.94
CLIP1-209ENST00000537178 WNT5BQ9H1J7 359 aa9.16□□□□□ -0.94
CLIP1-209ENST00000537178 TRIOBPQ9H2D6 2365 aa9.16□□□□□ -0.94
CLIP1-209ENST00000537178 PRR33A8MZF0 331 aa9.16□□□□□ -0.94
CLIP1-209ENST00000537178 FOXS1O43638 330 aa9.16□□□□□ -0.94
CLIP1-209ENST00000537178 CD160O95971 181 aa9.16□□□□□ -0.94
CLIP1-209ENST00000537178 SRIP30626 198 aa9.16□□□□□ -0.94
CLIP1-209ENST00000537178 ATP5IP56385 69 aaPredicted RBP9.16□□□□□ -0.94
CLIP1-209ENST00000537178 SPAARA0A1B0GVQ0 90 aa9.16□□□□□ -0.94
CLIP1-209ENST00000537178 SLC25A17O43808 307 aa9.16□□□□□ -0.94
CLIP1-209ENST00000537178 HLA-DQB1P01920 261 aa9.16□□□□□ -0.94
CLIP1-209ENST00000537178 SOD3P08294 240 aa9.16□□□□□ -0.94
CLIP1-209ENST00000537178 SCTP09683 121 aa9.16□□□□□ -0.94
CLIP1-209ENST00000537178 ASAH2BP0C7U1 165 aa9.16□□□□□ -0.94
CLIP1-209ENST00000537178 SUMO2P61956 95 aaKnown RBP9.16□□□□□ -0.94
CLIP1-209ENST00000537178 OR51M1Q9H341 326 aa9.16□□□□□ -0.94
CLIP1-209ENST00000537178 FSCN3Q9NQT6 498 aa9.16□□□□□ -0.94
CLIP1-209ENST00000537178 SOX21Q9Y651 276 aaPredicted RBP9.16□□□□□ -0.94
CLIP1-209ENST00000537178 CXorf66Q5JRM2 361 aaPredicted RBP9.15□□□□□ -0.94
CLIP1-209ENST00000537178 PARLQ9H300 379 aa9.15□□□□□ -0.94
CLIP1-209ENST00000537178 CALYQ9NYX4 217 aa9.15□□□□□ -0.94
CLIP1-209ENST00000537178 A0A1W2PQM1 296 aa9.15□□□□□ -0.94
CLIP1-209ENST00000537178 CDX1P47902 265 aaPredicted RBP9.15□□□□□ -0.94
CLIP1-209ENST00000537178 P2RY4P51582 365 aa9.15□□□□□ -0.94
CLIP1-209ENST00000537178 GCSAMLQ5JQS6 135 aa9.15□□□□□ -0.94
CLIP1-209ENST00000537178 ZNF660Q6AZW8 331 aaPredicted RBP9.15□□□□□ -0.94
CLIP1-209ENST00000537178 C19orf48Q6RUI8 117 aa9.15□□□□□ -0.94
CLIP1-209ENST00000537178 OR4D5Q8NGN0 318 aa9.15□□□□□ -0.94
CLIP1-209ENST00000537178 IDI2-AS1Q9NZ38 188 aa9.15□□□□□ -0.94
CLIP1-209ENST00000537178 C7orf71A4D174 169 aa9.15□□□□□ -0.94
CLIP1-209ENST00000537178 PGLYRP1O75594 196 aaPredicted RBP9.15□□□□□ -0.94
CLIP1-209ENST00000537178 RECKO95980 971 aa9.15□□□□□ -0.94
CLIP1-209ENST00000537178 COX6B1P14854 86 aa9.15□□□□□ -0.94
CLIP1-209ENST00000537178 C1orf100Q5SVJ3 147 aa9.15□□□□□ -0.94
CLIP1-209ENST00000537178 GPR146Q96CH1 333 aa9.15□□□□□ -0.94
CLIP1-209ENST00000537178 AQP10Q96PS8 301 aa9.15□□□□□ -0.94
CLIP1-209ENST00000537178 NEU1Q99519 415 aa9.15□□□□□ -0.94
CLIP1-209ENST00000537178 KLHDC2Q9Y2U9 406 aa9.15□□□□□ -0.94
CLIP1-209ENST00000537178 TRBV5-5A0A0J9YX44 114 aa9.15□□□□□ -0.95
CLIP1-209ENST00000537178 IL9P15248 144 aa9.15□□□□□ -0.95
CLIP1-209ENST00000537178 KLK2P20151 261 aa9.15□□□□□ -0.95
CLIP1-209ENST00000537178 ZNF56Q15929 161 aa9.15□□□□□ -0.95
CLIP1-209ENST00000537178 SAPCD1Q5SSQ6 148 aa9.15□□□□□ -0.95
CLIP1-209ENST00000537178 SGK494Q96LW2 274 aa9.15□□□□□ -0.95
CLIP1-209ENST00000537178 CISD1Q9NZ45 108 aaKnown RBP9.15□□□□□ -0.95
CLIP1-209ENST00000537178 TSPAN13O95857 204 aa9.14□□□□□ -0.95
CLIP1-209ENST00000537178 NPPCP23582 126 aa9.14□□□□□ -0.95
CLIP1-209ENST00000537178 RPS11P62280 158 aaKnown RBP eCLIP9.14□□□□□ -0.95
CLIP1-209ENST00000537178 MEF2CQ06413 473 aaPredicted RBP9.14□□□□□ -0.95
CLIP1-209ENST00000537178 GATAD1Q8WUU5 269 aa9.14□□□□□ -0.95
CLIP1-209ENST00000537178 MRPL32Q9BYC8 188 aaKnown RBP9.14□□□□□ -0.95
CLIP1-209ENST00000537178 KLK15Q9H2R5 256 aa9.14□□□□□ -0.95
CLIP1-209ENST00000537178 H0YL77 283 aa9.14□□□□□ -0.95
CLIP1-209ENST00000537178 SIGLEC5O15389 551 aa9.14□□□□□ -0.95
CLIP1-209ENST00000537178 Q5BKY6 102 aa9.14□□□□□ -0.95
CLIP1-209ENST00000537178 ZNF506Q5JVG8 444 aa9.14□□□□□ -0.95
CLIP1-209ENST00000537178 C10orf126Q8N4M7 172 aa9.14□□□□□ -0.95
CLIP1-209ENST00000537178 OR9G1Q8NH87 305 aa9.14□□□□□ -0.95
CLIP1-209ENST00000537178 RARRES2Q99969 163 aa9.14□□□□□ -0.95
CLIP1-209ENST00000537178 LINC00470Q9BZP3 86 aa9.14□□□□□ -0.95
CLIP1-209ENST00000537178 ZDBF2Q9HCK1 2354 aa9.14□□□□□ -0.95
CLIP1-209ENST00000537178 CRYBB3P26998 211 aa9.14□□□□□ -0.95
CLIP1-209ENST00000537178 SNRPD3P62318 126 aaKnown RBP9.14□□□□□ -0.95
CLIP1-209ENST00000537178 TNFRSF9Q07011 255 aa9.14□□□□□ -0.95
CLIP1-209ENST00000537178 LEMD1Q68G75 181 aa9.14□□□□□ -0.95
CLIP1-209ENST00000537178 ZPLD1Q8TCW7 415 aa9.14□□□□□ -0.95
CLIP1-209ENST00000537178 FGF11Q92914 225 aa9.14□□□□□ -0.95
CLIP1-209ENST00000537178 JKAMPQ9P055 326 aa9.14□□□□□ -0.95
CLIP1-209ENST00000537178 JPT1Q9UK76 154 aa9.14□□□□□ -0.95
CLIP1-209ENST00000537178 TRPM6Q9BX84 2022 aa9.14□□□□□ -0.95
CLIP1-209ENST00000537178 H7C1H1 209 aa9.14□□□□□ -0.95
CLIP1-209ENST00000537178 OTX1P32242 354 aaPredicted RBP9.14□□□□□ -0.95
CLIP1-209ENST00000537178 CRYBA2P53672 197 aa9.14□□□□□ -0.95
CLIP1-209ENST00000537178 RELQ04864 619 aaPredicted RBP9.14□□□□□ -0.95
CLIP1-209ENST00000537178 ATP5G2Q06055 141 aa9.14□□□□□ -0.95
CLIP1-209ENST00000537178 C10orf128Q5T292 105 aa9.14□□□□□ -0.95
CLIP1-209ENST00000537178 FAM159AQ6UWV7 190 aa9.14□□□□□ -0.95
CLIP1-209ENST00000537178 BEX4Q9NWD9 120 aaPredicted RBP9.14□□□□□ -0.95
CLIP1-209ENST00000537178 DLL3Q9NYJ7 618 aa9.14□□□□□ -0.95
CLIP1-209ENST00000537178 F11RQ9Y624 299 aaKnown RBP9.14□□□□□ -0.95
CLIP1-209ENST00000537178 SIRT4Q9Y6E7 314 aaPredicted RBP9.14□□□□□ -0.95
CLIP1-209ENST00000537178 MARCH11A6NNE9 402 aa9.13□□□□□ -0.95
CLIP1-209ENST00000537178 FXYD3Q14802 87 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms