RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 PAGE4O60829 102 aa6.54□□□□□ -1.36
CPSF7-216ENST00000536548 MMP23AO75900 390 aa6.54□□□□□ -1.36
CPSF7-216ENST00000536548 IGKV1-5P01602 117 aa6.54□□□□□ -1.36
CPSF7-216ENST00000536548 MMP7P09237 267 aaPredicted RBP6.54□□□□□ -1.36
CPSF7-216ENST00000536548 KITLGP21583 273 aa6.54□□□□□ -1.36
CPSF7-216ENST00000536548 SRD5A2P31213 254 aa6.54□□□□□ -1.36
CPSF7-216ENST00000536548 SOX8P57073 446 aa6.54□□□□□ -1.36
CPSF7-216ENST00000536548 CARD18P57730 90 aa6.54□□□□□ -1.36
CPSF7-216ENST00000536548 CATR1Q13166 79 aa6.54□□□□□ -1.36
CPSF7-216ENST00000536548 DAZAP2Q15038 168 aaPredicted RBP6.54□□□□□ -1.36
CPSF7-216ENST00000536548 CEACAM16Q2WEN9 425 aa6.54□□□□□ -1.36
CPSF7-216ENST00000536548 COL5A1-AS1Q5SY13 56 aa6.54□□□□□ -1.36
CPSF7-216ENST00000536548 OR8G2PQ6IF36 304 aa6.54□□□□□ -1.36
CPSF7-216ENST00000536548 ACSM6Q6P461 480 aa6.54□□□□□ -1.36
CPSF7-216ENST00000536548 TOMM20LQ6UXN7 152 aa6.54□□□□□ -1.36
CPSF7-216ENST00000536548 TEX43Q6ZNM6 134 aa6.54□□□□□ -1.36
CPSF7-216ENST00000536548 Q6ZRM9 215 aa6.54□□□□□ -1.36
CPSF7-216ENST00000536548 OR56B2PQ8NGI1 322 aa6.54□□□□□ -1.36
CPSF7-216ENST00000536548 OR5P3Q8WZ94 311 aa6.54□□□□□ -1.36
CPSF7-216ENST00000536548 RAB1CQ92928 201 aa6.54□□□□□ -1.36
CPSF7-216ENST00000536548 APOBEC3DQ96AK3 386 aaPredicted RBP6.54□□□□□ -1.36
CPSF7-216ENST00000536548 TMEM45BQ96B21 275 aa6.54□□□□□ -1.36
CPSF7-216ENST00000536548 OR6C1Q96RD1 312 aa6.54□□□□□ -1.36
CPSF7-216ENST00000536548 TMEM204Q9BSN7 226 aa6.54□□□□□ -1.36
CPSF7-216ENST00000536548 SRXN1Q9BYN0 137 aa6.54□□□□□ -1.36
CPSF7-216ENST00000536548 PKIBQ9C010 78 aa6.54□□□□□ -1.36
CPSF7-216ENST00000536548 ZDHHC11Q9H8X9 412 aa6.54□□□□□ -1.36
CPSF7-216ENST00000536548 WDR54Q9H977 334 aa6.54□□□□□ -1.36
CPSF7-216ENST00000536548 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.54□□□□□ -1.36
CPSF7-216ENST00000536548 HSPB7Q9UBY9 170 aa6.54□□□□□ -1.36
CPSF7-216ENST00000536548 KCNS2Q9ULS6 477 aa6.54□□□□□ -1.36
CPSF7-216ENST00000536548 MPC1Q9Y5U8 109 aa6.54□□□□□ -1.36
CPSF7-216ENST00000536548 SPTBP11277 2137 aa6.53□□□□□ -1.36
CPSF7-216ENST00000536548 ANKRD30BLA7E2S9 258 aa6.53□□□□□ -1.36
CPSF7-216ENST00000536548 A8MXE2 369 aa6.53□□□□□ -1.36
CPSF7-216ENST00000536548 HS3ST1O14792 307 aa6.53□□□□□ -1.36
CPSF7-216ENST00000536548 MPDU1O75352 247 aa6.53□□□□□ -1.36
CPSF7-216ENST00000536548 IGKV1D-33P01593 117 aa6.53□□□□□ -1.36
CPSF7-216ENST00000536548 IGKV1-33P01594 117 aa6.53□□□□□ -1.36
CPSF7-216ENST00000536548 IGKV1-39P01597 117 aa6.53□□□□□ -1.36
CPSF7-216ENST00000536548 IGKV1D-39P04432 117 aa6.53□□□□□ -1.36
CPSF7-216ENST00000536548 ZNF16P17020 682 aaPredicted RBP6.53□□□□□ -1.36
CPSF7-216ENST00000536548 CHRNA7P36544 502 aa6.53□□□□□ -1.36
CPSF7-216ENST00000536548 GNB2P62879 340 aa6.53□□□□□ -1.36
CPSF7-216ENST00000536548 RPP30P78346 268 aaKnown RBP6.53□□□□□ -1.36
CPSF7-216ENST00000536548 PCOLCEQ15113 449 aa6.53□□□□□ -1.36
CPSF7-216ENST00000536548 VWC2Q2TAL6 325 aa6.53□□□□□ -1.36
CPSF7-216ENST00000536548 LINC01551Q86U37 167 aa6.53□□□□□ -1.36
CPSF7-216ENST00000536548 RPS19BP1Q86WX3 136 aaKnown RBP6.53□□□□□ -1.36
CPSF7-216ENST00000536548 Q8IYB0 196 aa6.53□□□□□ -1.36
CPSF7-216ENST00000536548 FAM58AQ8N1B3 248 aa6.53□□□□□ -1.36
CPSF7-216ENST00000536548 ARL6IP6Q8N6S5 226 aa6.53□□□□□ -1.36
CPSF7-216ENST00000536548 OR4B1Q8NGF8 309 aa6.53□□□□□ -1.36
CPSF7-216ENST00000536548 OR10G8Q8NGN5 311 aa6.53□□□□□ -1.36
CPSF7-216ENST00000536548 NRGNQ92686 78 aa6.53□□□□□ -1.36
CPSF7-216ENST00000536548 ZNF837Q96EG3 531 aaPredicted RBP6.53□□□□□ -1.36
CPSF7-216ENST00000536548 TAAR6Q96RI8 345 aa6.53□□□□□ -1.36
CPSF7-216ENST00000536548 GPHA2Q96T91 129 aa6.53□□□□□ -1.36
CPSF7-216ENST00000536548 LINC00470Q9BZP3 86 aa6.53□□□□□ -1.36
CPSF7-216ENST00000536548 OR2J1Q9GZK6 312 aa6.53□□□□□ -1.36
CPSF7-216ENST00000536548 ELOVL5Q9NYP7 299 aa6.53□□□□□ -1.36
CPSF7-216ENST00000536548 MTCH1Q9NZJ7 389 aa6.53□□□□□ -1.36
CPSF7-216ENST00000536548 PPP1R3CQ9UQK1 317 aa6.53□□□□□ -1.36
CPSF7-216ENST00000536548 ABCA4P78363 2273 aa6.52□□□□□ -1.37
CPSF7-216ENST00000536548 EXPH5Q8NEV8 1989 aa6.52□□□□□ -1.37
CPSF7-216ENST00000536548 A0A1W2PPV4 95 aa6.52□□□□□ -1.37
CPSF7-216ENST00000536548 RAB29O14966 203 aa6.52□□□□□ -1.37
CPSF7-216ENST00000536548 LILRA1O75019 489 aa6.52□□□□□ -1.37
CPSF7-216ENST00000536548 TIAF1O95411 115 aa6.52□□□□□ -1.37
CPSF7-216ENST00000536548 MT-CO2P00403 227 aa6.52□□□□□ -1.37
CPSF7-216ENST00000536548 MT-ND6P03923 174 aa6.52□□□□□ -1.37
CPSF7-216ENST00000536548 UMODP07911 640 aa6.52□□□□□ -1.37
CPSF7-216ENST00000536548 CCL3P10147 92 aa6.52□□□□□ -1.37
CPSF7-216ENST00000536548 RAC2P15153 192 aa6.52□□□□□ -1.37
CPSF7-216ENST00000536548 CRISP2P16562 243 aa6.52□□□□□ -1.37
CPSF7-216ENST00000536548 GCH1P30793 250 aa6.52□□□□□ -1.37
CPSF7-216ENST00000536548 ADMP35318 185 aa6.52□□□□□ -1.37
CPSF7-216ENST00000536548 ARR3P36575 388 aa6.52□□□□□ -1.37
CPSF7-216ENST00000536548 GPM6AP51674 278 aa6.52□□□□□ -1.37
CPSF7-216ENST00000536548 FOXL2P58012 376 aa6.52□□□□□ -1.37
CPSF7-216ENST00000536548 GNG3P63215 75 aa6.52□□□□□ -1.37
CPSF7-216ENST00000536548 Q0VG73 95 aa6.52□□□□□ -1.37
CPSF7-216ENST00000536548 CDSNQ15517 529 aa6.52□□□□□ -1.37
CPSF7-216ENST00000536548 CLEC12BQ2HXU8 276 aa6.52□□□□□ -1.37
CPSF7-216ENST00000536548 ZNF585BQ52M93 769 aa6.52□□□□□ -1.37
CPSF7-216ENST00000536548 CST9LP1Q5W188 147 aa6.52□□□□□ -1.37
CPSF7-216ENST00000536548 OR5AU1Q8NGC0 362 aa6.52□□□□□ -1.37
CPSF7-216ENST00000536548 SDSLQ96GA7 329 aa6.52□□□□□ -1.37
CPSF7-216ENST00000536548 SFRP2Q96HF1 295 aa6.52□□□□□ -1.37
CPSF7-216ENST00000536548 SGCZQ96LD1 299 aa6.52□□□□□ -1.37
CPSF7-216ENST00000536548 ALKBH3Q96Q83 286 aaPredicted RBP6.52□□□□□ -1.37
CPSF7-216ENST00000536548 NPCDR1Q9BY65 106 aa6.52□□□□□ -1.37
CPSF7-216ENST00000536548 PATZ1Q9HBE1 687 aaKnown RBP6.52□□□□□ -1.37
CPSF7-216ENST00000536548 LPAR2Q9HBW0 351 aa6.52□□□□□ -1.37
CPSF7-216ENST00000536548 ZNF586Q9NXT0 402 aa6.52□□□□□ -1.37
CPSF7-216ENST00000536548 IL36BQ9NZH7 164 aa6.52□□□□□ -1.37
CPSF7-216ENST00000536548 KCNIP1Q9NZI2 227 aa6.52□□□□□ -1.37
CPSF7-216ENST00000536548 MRPS18CQ9Y3D5 142 aaKnown RBP6.52□□□□□ -1.37
CPSF7-216ENST00000536548 LY96Q9Y6Y9 160 aa6.52□□□□□ -1.37
CPSF7-216ENST00000536548 CACNA1CQ13936 2221 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms