RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 PRH1P02810 166 aa10.96□□□□□ -0.65
RTN3P1-201ENST00000536295 PTHLHP12272 177 aa10.96□□□□□ -0.65
RTN3P1-201ENST00000536295 ZP3P21754 424 aa10.96□□□□□ -0.65
RTN3P1-201ENST00000536295 ARPC4P59998 168 aa10.96□□□□□ -0.65
RTN3P1-201ENST00000536295 CDK10Q15131 360 aa10.96□□□□□ -0.65
RTN3P1-201ENST00000536295 C10orf55Q5SWW7 151 aa10.96□□□□□ -0.65
RTN3P1-201ENST00000536295 OVCH2Q7RTZ1 564 aa10.96□□□□□ -0.65
RTN3P1-201ENST00000536295 VKORC1L1Q8N0U8 176 aa10.96□□□□□ -0.65
RTN3P1-201ENST00000536295 GVQW1Q8N7I0 195 aa10.96□□□□□ -0.65
RTN3P1-201ENST00000536295 MRPS7Q9Y2R9 242 aaKnown RBP10.96□□□□□ -0.65
RTN3P1-201ENST00000536295 ETV7Q9Y603 341 aa10.96□□□□□ -0.65
RTN3P1-201ENST00000536295 TRIM64CA6NLI5 447 aa10.95□□□□□ -0.66
RTN3P1-201ENST00000536295 RBMXL2O75526 392 aaKnown RBP10.95□□□□□ -0.66
RTN3P1-201ENST00000536295 TRBV12-3P01733 135 aa10.95□□□□□ -0.66
RTN3P1-201ENST00000536295 OR9G9P0C7N8 305 aa10.95□□□□□ -0.66
RTN3P1-201ENST00000536295 AADACP22760 399 aa10.95□□□□□ -0.66
RTN3P1-201ENST00000536295 TGFBR1P36897 503 aa10.95□□□□□ -0.66
RTN3P1-201ENST00000536295 SYNJ2BPP57105 145 aa10.95□□□□□ -0.66
RTN3P1-201ENST00000536295 DYRK1AQ13627 763 aa10.95□□□□□ -0.66
RTN3P1-201ENST00000536295 KCTD21Q4G0X4 260 aa10.95□□□□□ -0.66
RTN3P1-201ENST00000536295 ANKRD13BQ86YJ7 626 aa10.95□□□□□ -0.66
RTN3P1-201ENST00000536295 ADAD2Q8NCV1 583 aaKnown RBP10.95□□□□□ -0.66
RTN3P1-201ENST00000536295 BEST4Q8NFU0 473 aa10.95□□□□□ -0.66
RTN3P1-201ENST00000536295 SECTM1Q8WVN6 248 aa10.95□□□□□ -0.66
RTN3P1-201ENST00000536295 GPHA2Q96T91 129 aa10.95□□□□□ -0.66
RTN3P1-201ENST00000536295 TAS2R8Q9NYW2 309 aa10.95□□□□□ -0.66
RTN3P1-201ENST00000536295 PEF1Q9UBV8 284 aaKnown RBP10.95□□□□□ -0.66
RTN3P1-201ENST00000536295 ADAM30Q9UKF2 790 aa10.95□□□□□ -0.66
RTN3P1-201ENST00000536295 TNFSF12O43508 249 aa10.94□□□□□ -0.66
RTN3P1-201ENST00000536295 CREBL2O60519 120 aaPredicted RBP10.94□□□□□ -0.66
RTN3P1-201ENST00000536295 FCGR2CP31995 323 aa10.94□□□□□ -0.66
RTN3P1-201ENST00000536295 SCAND1P57086 179 aa10.94□□□□□ -0.66
RTN3P1-201ENST00000536295 KLF5Q13887 457 aaPredicted RBP10.94□□□□□ -0.66
RTN3P1-201ENST00000536295 ZNF343Q6P1L6 599 aa10.94□□□□□ -0.66
RTN3P1-201ENST00000536295 SBSPONQ8IVN8 264 aa10.94□□□□□ -0.66
RTN3P1-201ENST00000536295 MMD2Q8IY49 270 aa10.94□□□□□ -0.66
RTN3P1-201ENST00000536295 OR4S2Q8NH73 311 aa10.94□□□□□ -0.66
RTN3P1-201ENST00000536295 USMG5Q96IX5 58 aa10.94□□□□□ -0.66
RTN3P1-201ENST00000536295 HSD17B10Q99714 261 aaKnown RBP10.94□□□□□ -0.66
RTN3P1-201ENST00000536295 DIABLOQ9NR28 239 aa10.94□□□□□ -0.66
RTN3P1-201ENST00000536295 MEIS3P1A6NDR6 274 aa10.93□□□□□ -0.66
RTN3P1-201ENST00000536295 BRI3O95415 125 aa10.93□□□□□ -0.66
RTN3P1-201ENST00000536295 FRMD6-AS1P0C7T7 363 aa10.93□□□□□ -0.66
RTN3P1-201ENST00000536295 LSM3P62310 102 aaKnown RBP10.93□□□□□ -0.66
RTN3P1-201ENST00000536295 RHOGP84095 191 aa10.93□□□□□ -0.66
RTN3P1-201ENST00000536295 EIF4EBP1Q13541 118 aaPredicted RBP10.93□□□□□ -0.66
RTN3P1-201ENST00000536295 SSX9Q7RTT3 188 aa10.93□□□□□ -0.66
RTN3P1-201ENST00000536295 HOGA1Q86XE5 327 aa10.93□□□□□ -0.66
RTN3P1-201ENST00000536295 MFSD4AQ8N468 514 aa10.93□□□□□ -0.66
RTN3P1-201ENST00000536295 OR9G4Q8NGQ1 327 aa10.93□□□□□ -0.66
RTN3P1-201ENST00000536295 OR13F1Q8NGS4 319 aa10.93□□□□□ -0.66
RTN3P1-201ENST00000536295 SPIN2AQ99865 258 aa10.93□□□□□ -0.66
RTN3P1-201ENST00000536295 SPIN2BQ9BPZ2 258 aa10.93□□□□□ -0.66
RTN3P1-201ENST00000536295 AUNIPQ9H7T9 357 aa10.93□□□□□ -0.66
RTN3P1-201ENST00000536295 AKIP1Q9NQ31 210 aa10.93□□□□□ -0.66
RTN3P1-201ENST00000536295 CCL28Q9NRJ3 127 aa10.93□□□□□ -0.66
RTN3P1-201ENST00000536295 SORL1Q92673 2214 aa10.93□□□□□ -0.66
RTN3P1-201ENST00000536295 KMT2CQ8NEZ4 4911 aaKnown RBP10.93□□□□□ -0.66
RTN3P1-201ENST00000536295 A0A0A6YYH2 397 aa10.92□□□□□ -0.66
RTN3P1-201ENST00000536295 HMX3A6NHT5 357 aa10.92□□□□□ -0.66
RTN3P1-201ENST00000536295 A6NJ64 397 aa10.92□□□□□ -0.66
RTN3P1-201ENST00000536295 KBTBD11O94819 623 aa10.92□□□□□ -0.66
RTN3P1-201ENST00000536295 OR2A4O95047 310 aa10.92□□□□□ -0.66
RTN3P1-201ENST00000536295 IGLV1-51P01701 117 aa10.92□□□□□ -0.66
RTN3P1-201ENST00000536295 BRWD1-AS2P59051 145 aa10.92□□□□□ -0.66
RTN3P1-201ENST00000536295 FXYD4P59646 89 aa10.92□□□□□ -0.66
RTN3P1-201ENST00000536295 ZNF45Q02386 682 aa10.92□□□□□ -0.66
RTN3P1-201ENST00000536295 ATP5G2Q06055 141 aa10.92□□□□□ -0.66
RTN3P1-201ENST00000536295 EXOSC2Q13868 293 aaKnown RBP10.92□□□□□ -0.66
RTN3P1-201ENST00000536295 RPEL1Q2QD12 228 aa10.92□□□□□ -0.66
RTN3P1-201ENST00000536295 ZNF66Q6ZN08 573 aa10.92□□□□□ -0.66
RTN3P1-201ENST00000536295 FYTTD1Q96QD9 318 aaKnown RBP10.92□□□□□ -0.66
RTN3P1-201ENST00000536295 OR2A7Q96R45 310 aa10.92□□□□□ -0.66
RTN3P1-201ENST00000536295 FAM223BA6NKX1 122 aa10.91□□□□□ -0.66
RTN3P1-201ENST00000536295 AIREO43918 545 aa10.91□□□□□ -0.66
RTN3P1-201ENST00000536295 OR2J3O76001 311 aa10.91□□□□□ -0.66
RTN3P1-201ENST00000536295 PPYP01298 95 aa10.91□□□□□ -0.66
RTN3P1-201ENST00000536295 TATDN3Q17R31 274 aa10.91□□□□□ -0.66
RTN3P1-201ENST00000536295 TIMM50Q3ZCQ8 353 aa10.91□□□□□ -0.66
RTN3P1-201ENST00000536295 IL34Q6ZMJ4 242 aa10.91□□□□□ -0.66
RTN3P1-201ENST00000536295 C19orf35Q6ZS72 473 aa10.91□□□□□ -0.66
RTN3P1-201ENST00000536295 FAM223AQ8IWN6 122 aa10.91□□□□□ -0.66
RTN3P1-201ENST00000536295 TTC9CQ8N5M4 171 aa10.91□□□□□ -0.66
RTN3P1-201ENST00000536295 VSTM2AQ8TAG5 236 aa10.91□□□□□ -0.66
RTN3P1-201ENST00000536295 SNAPC3Q92966 411 aa10.91□□□□□ -0.66
RTN3P1-201ENST00000536295 SLC5A7Q9GZV3 580 aa10.91□□□□□ -0.66
RTN3P1-201ENST00000536295 TRBV9A0A0B4J1U6 114 aa10.9□□□□□ -0.66
RTN3P1-201ENST00000536295 DPPA5A6NC42 116 aa10.9□□□□□ -0.66
RTN3P1-201ENST00000536295 TEX22C9J3V5 150 aa10.9□□□□□ -0.66
RTN3P1-201ENST00000536295 E7EUB6 86 aa10.9□□□□□ -0.66
RTN3P1-201ENST00000536295 RPS19P39019 145 aaKnown RBP10.9□□□□□ -0.66
RTN3P1-201ENST00000536295 KIR2DS2P43631 304 aa10.9□□□□□ -0.66
RTN3P1-201ENST00000536295 CBX5P45973 191 aa10.9□□□□□ -0.66
RTN3P1-201ENST00000536295 RPL27AP46776 148 aaKnown RBP10.9□□□□□ -0.66
RTN3P1-201ENST00000536295 TMEM17Q86X19 198 aa10.9□□□□□ -0.66
RTN3P1-201ENST00000536295 SPAG16Q8N0X2 631 aa10.9□□□□□ -0.66
RTN3P1-201ENST00000536295 PUSL1Q8N0Z8 303 aaKnown RBP10.9□□□□□ -0.66
RTN3P1-201ENST00000536295 TSPAN14Q8NG11 270 aa10.9□□□□□ -0.66
RTN3P1-201ENST00000536295 TMEM167AQ8TBQ9 72 aa10.9□□□□□ -0.66
RTN3P1-201ENST00000536295 YIPF6Q96EC8 236 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms