RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 FRAS1Q86XX4 4008 aa2.18□□□□□ -2.06
SNHG1-202ENST00000535689 IGHV3OR15-7A0A075B7D8 119 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 IGHV3-64DA0A0J9YX35 117 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 hADV38S2A0JD32 116 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 PRSS37A4D1T9 235 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 TRPC5OSA6NMA1 111 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 CPSF4LA6NMK7 179 aaKnown RBP2.17□□□□□ -2.06
SNHG1-202ENST00000535689 C12orf77C9JDV5 145 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 LRRN3E7EW58 273 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 CDIPTO14735 213 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 HSD17B6O14756 317 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 BET1O15155 118 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 MPZL2O60487 215 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 SLC16A7O60669 478 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 E2F6O75461 281 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 IGHG2P01859 326 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 IFNA4P05014 189 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 ACSM4P0C7M7 580 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 IDO1P14902 403 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 CTLA4P16410 223 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 AQP2P41181 271 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 NMUP48645 174 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 UBE2AP49459 152 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 RPL14P50914 215 aaKnown RBP2.17□□□□□ -2.06
SNHG1-202ENST00000535689 SUB1P53999 127 aaKnown RBP eCLIP2.17□□□□□ -2.06
SNHG1-202ENST00000535689 TAS2R41P59536 307 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 SEC61GP60059 68 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 GNG11P61952 73 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 ESRRGP62508 458 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 HIST1H3AP68431 136 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 PITPNAQ00169 270 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 HOXC5Q00444 222 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 RUNX1Q01196 453 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 DAZ2Q13117 558 aaKnown RBP2.17□□□□□ -2.06
SNHG1-202ENST00000535689 IL18Q14116 193 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 SMIM21Q3B7S5 101 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 HIST2H3PS2Q5TEC6 136 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 AGBL2Q5U5Z8 902 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 STUMQ69YW2 141 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 HCP5Q6MZN7 132 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 CEMP1Q6PRD7 247 aaPredicted RBP2.17□□□□□ -2.06
SNHG1-202ENST00000535689 WDR82Q6UXN9 313 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 HIST2H3AQ71DI3 136 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 SAXO1Q8IYX7 474 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 STPG2Q8N412 459 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 TPRX1Q8N7U7 411 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 OR4M1Q8NGD0 313 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 OR1L4Q8NGR5 311 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 ANGPTL6Q8NI99 470 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 CD300LFQ8TDQ1 290 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 C4orf3Q8WVX3 66 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 TMEM239Q8WW34 195 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 MCUR1Q96AQ8 359 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 RNF170Q96K19 258 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 UBE2E2Q96LR5 201 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 NSRP1Q9H0G5 558 aaKnown RBP2.17□□□□□ -2.06
SNHG1-202ENST00000535689 TMEM38AQ9H6F2 299 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 NMNAT1Q9HAN9 279 aaPredicted RBP2.17□□□□□ -2.06
SNHG1-202ENST00000535689 NEK6Q9HC98 313 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 DAZ3Q9NR90 486 aaKnown RBP2.17□□□□□ -2.06
SNHG1-202ENST00000535689 SLC25A37Q9NYZ2 338 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 PRO0461Q9UI25 63 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 ANGPT4Q9Y264 503 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 SIGLEC7Q9Y286 467 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 AMMECR1Q9Y4X0 333 aaPredicted RBP2.17□□□□□ -2.06
SNHG1-202ENST00000535689 WSB1Q9Y6I7 421 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 HSPE1-MOB4S4R3N1 261 aa2.17□□□□□ -2.06
SNHG1-202ENST00000535689 IGLV4-69A0A075B6H9 119 aa2.16□□□□□ -2.06
SNHG1-202ENST00000535689 IGLV4-60A0A075B6I1 120 aa2.16□□□□□ -2.06
SNHG1-202ENST00000535689 ARRDC5A6NEK1 342 aa2.16□□□□□ -2.06
SNHG1-202ENST00000535689 ODF3BA8MYP8 253 aa2.16□□□□□ -2.06
SNHG1-202ENST00000535689 H3BSH0 61 aa2.16□□□□□ -2.06
SNHG1-202ENST00000535689 M0QX08 132 aa2.16□□□□□ -2.06
SNHG1-202ENST00000535689 M0R135 149 aa2.16□□□□□ -2.06
SNHG1-202ENST00000535689 RER1O15258 196 aa2.16□□□□□ -2.06
SNHG1-202ENST00000535689 EIF3GO75821 320 aaKnown RBP eCLIP2.16□□□□□ -2.06
SNHG1-202ENST00000535689 OR5F1O95221 314 aa2.16□□□□□ -2.06
SNHG1-202ENST00000535689 RAB3DO95716 219 aa2.16□□□□□ -2.06
SNHG1-202ENST00000535689 CD14P08571 375 aa2.16□□□□□ -2.06
SNHG1-202ENST00000535689 PSG2P11465 335 aa2.16□□□□□ -2.06
SNHG1-202ENST00000535689 SPNP16150 400 aa2.16□□□□□ -2.06
SNHG1-202ENST00000535689 KRTAP5-9P26371 169 aa2.16□□□□□ -2.06
SNHG1-202ENST00000535689 OTX1P32242 354 aaPredicted RBP2.16□□□□□ -2.06
SNHG1-202ENST00000535689 CTRLP40313 264 aa2.16□□□□□ -2.06
SNHG1-202ENST00000535689 MAP2K4P45985 399 aa2.16□□□□□ -2.06
SNHG1-202ENST00000535689 RAB7AP51149 207 aa2.16□□□□□ -2.06
SNHG1-202ENST00000535689 BLVRAP53004 296 aa2.16□□□□□ -2.06
SNHG1-202ENST00000535689 ACTA2P62736 377 aa2.16□□□□□ -2.06
SNHG1-202ENST00000535689 GRB2P62993 217 aaKnown RBP2.16□□□□□ -2.06
SNHG1-202ENST00000535689 GNG3P63215 75 aa2.16□□□□□ -2.06
SNHG1-202ENST00000535689 ACTG2P63267 376 aa2.16□□□□□ -2.06
SNHG1-202ENST00000535689 ACTC1P68032 377 aa2.16□□□□□ -2.06
SNHG1-202ENST00000535689 ACTA1P68133 377 aa2.16□□□□□ -2.06
SNHG1-202ENST00000535689 FMODQ06828 376 aa2.16□□□□□ -2.06
SNHG1-202ENST00000535689 CKAP4Q07065 602 aaKnown RBP2.16□□□□□ -2.06
SNHG1-202ENST00000535689 TMEM267Q0VDI3 215 aaPredicted RBP2.16□□□□□ -2.06
SNHG1-202ENST00000535689 HES1Q14469 280 aa2.16□□□□□ -2.06
SNHG1-202ENST00000535689 CLINT1Q14677 625 aa2.16□□□□□ -2.06
SNHG1-202ENST00000535689 KIAA0087Q14695 138 aa2.16□□□□□ -2.06
SNHG1-202ENST00000535689 SOHLH1Q5JUK2 328 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms