RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 NPIPB11E5RHQ5 1161 aa11.18□□□□□ -0.62
HDAC4-214ENST00000535493 SH2D1BO14796 132 aa11.18□□□□□ -0.62
HDAC4-214ENST00000535493 HAND1O96004 215 aa11.18□□□□□ -0.62
HDAC4-214ENST00000535493 MBP02144 154 aa11.18□□□□□ -0.62
HDAC4-214ENST00000535493 KITLGP21583 273 aa11.18□□□□□ -0.62
HDAC4-214ENST00000535493 CD1BP29016 333 aa11.18□□□□□ -0.62
HDAC4-214ENST00000535493 SOX8P57073 446 aa11.18□□□□□ -0.62
HDAC4-214ENST00000535493 OR5I1Q13606 314 aa11.18□□□□□ -0.62
HDAC4-214ENST00000535493 TMEM144Q7Z5S9 345 aa11.18□□□□□ -0.62
HDAC4-214ENST00000535493 LINC00596Q86U02 117 aa11.18□□□□□ -0.62
HDAC4-214ENST00000535493 ABHD12Q8N2K0 398 aa11.18□□□□□ -0.62
HDAC4-214ENST00000535493 ZNF703Q9H7S9 590 aaPredicted RBP11.18□□□□□ -0.62
HDAC4-214ENST00000535493 MBNL3Q9NUK0 354 aaKnown RBP11.18□□□□□ -0.62
HDAC4-214ENST00000535493 TACC2O95359 2948 aa11.18□□□□□ -0.62
HDAC4-214ENST00000535493 F6UZH7 168 aa11.18□□□□□ -0.62
HDAC4-214ENST00000535493 RAB4AP20338 218 aa11.18□□□□□ -0.62
HDAC4-214ENST00000535493 ARR3P36575 388 aa11.18□□□□□ -0.62
HDAC4-214ENST00000535493 KIAA1644Q3SXP7 199 aa11.18□□□□□ -0.62
HDAC4-214ENST00000535493 SPATA31B1PQ5VZV4 182 aa11.18□□□□□ -0.62
HDAC4-214ENST00000535493 CT55Q8WUE5 264 aa11.18□□□□□ -0.62
HDAC4-214ENST00000535493 TMEM208Q9BTX3 173 aa11.18□□□□□ -0.62
HDAC4-214ENST00000535493 PARD6GQ9BYG4 376 aaPredicted RBP11.18□□□□□ -0.62
HDAC4-214ENST00000535493 RYDENQ9NUL5 291 aaKnown RBP11.18□□□□□ -0.62
HDAC4-214ENST00000535493 KCNIP1Q9NZI2 227 aa11.18□□□□□ -0.62
HDAC4-214ENST00000535493 TRAV3A0A0B4J244 114 aa11.17□□□□□ -0.62
HDAC4-214ENST00000535493 FAM90A26D6RGX4 464 aa11.17□□□□□ -0.62
HDAC4-214ENST00000535493 FOXH1O75593 365 aa11.17□□□□□ -0.62
HDAC4-214ENST00000535493 VENTXO95231 258 aa11.17□□□□□ -0.62
HDAC4-214ENST00000535493 ZNF90Q03938 601 aa11.17□□□□□ -0.62
HDAC4-214ENST00000535493 EDDM3AQ14507 147 aa11.17□□□□□ -0.62
HDAC4-214ENST00000535493 ZCCHC14Q8WYQ9 949 aaKnown RBP11.17□□□□□ -0.62
HDAC4-214ENST00000535493 NINJ1Q92982 152 aa11.17□□□□□ -0.62
HDAC4-214ENST00000535493 BOKQ9UMX3 212 aaPredicted RBP11.17□□□□□ -0.62
HDAC4-214ENST00000535493 MDFIC2A0A1B0GVS7 189 aa11.17□□□□□ -0.62
HDAC4-214ENST00000535493 CLDN14O95500 239 aa11.17□□□□□ -0.62
HDAC4-214ENST00000535493 P0C879 139 aa11.17□□□□□ -0.62
HDAC4-214ENST00000535493 OR10J1P30954 320 aa11.17□□□□□ -0.62
HDAC4-214ENST00000535493 IER3P46695 156 aa11.17□□□□□ -0.62
HDAC4-214ENST00000535493 DIRC2Q96SL1 478 aa11.17□□□□□ -0.62
HDAC4-214ENST00000535493 RTL8AQ9BWD3 113 aa11.17□□□□□ -0.62
HDAC4-214ENST00000535493 TTTY12Q9BZ98 90 aa11.17□□□□□ -0.62
HDAC4-214ENST00000535493 LINC00470Q9BZP3 86 aa11.17□□□□□ -0.62
HDAC4-214ENST00000535493 PKIBQ9C010 78 aa11.17□□□□□ -0.62
HDAC4-214ENST00000535493 OBP2BQ9NPH6 170 aa11.17□□□□□ -0.62
HDAC4-214ENST00000535493 TMEM106BQ9NUM4 274 aa11.17□□□□□ -0.62
HDAC4-214ENST00000535493 YTHDF2Q9Y5A9 579 aaKnown RBP11.17□□□□□ -0.62
HDAC4-214ENST00000535493 TMEM210A6NLX4 147 aa11.16□□□□□ -0.62
HDAC4-214ENST00000535493 K7EN84 100 aa11.16□□□□□ -0.62
HDAC4-214ENST00000535493 FCGR3BO75015 233 aa11.16□□□□□ -0.62
HDAC4-214ENST00000535493 ERVK11-1P61568 191 aa11.16□□□□□ -0.62
HDAC4-214ENST00000535493 LCN2P80188 198 aa11.16□□□□□ -0.62
HDAC4-214ENST00000535493 PLGLB1Q02325 96 aa11.16□□□□□ -0.62
HDAC4-214ENST00000535493 PSG7Q13046 419 aa11.16□□□□□ -0.62
HDAC4-214ENST00000535493 KRTCAP3Q53RY4 240 aa11.16□□□□□ -0.62
HDAC4-214ENST00000535493 PRR31Q5SQ13 230 aa11.16□□□□□ -0.62
HDAC4-214ENST00000535493 PRAMEF6Q5VXH4 476 aa11.16□□□□□ -0.62
HDAC4-214ENST00000535493 GCNT2Q8N0V5 402 aa11.16□□□□□ -0.62
HDAC4-214ENST00000535493 DEFB127Q9H1M4 99 aa11.16□□□□□ -0.62
HDAC4-214ENST00000535493 SEPSECSQ9HD40 501 aaKnown RBP11.16□□□□□ -0.62
HDAC4-214ENST00000535493 PILRBQ9UKJ0 227 aa11.16□□□□□ -0.62
HDAC4-214ENST00000535493 MGAQ8IWI9 3026 aa11.16□□□□□ -0.62
HDAC4-214ENST00000535493 KIR2DL5BA0A0G2JN68 375 aa11.16□□□□□ -0.62
HDAC4-214ENST00000535493 KIR2DL5BA0A0G2JPC4 375 aa11.16□□□□□ -0.62
HDAC4-214ENST00000535493 RNF212BA8MTL3 300 aa11.16□□□□□ -0.62
HDAC4-214ENST00000535493 LYZL6O75951 148 aa11.16□□□□□ -0.62
HDAC4-214ENST00000535493 IGHEP01854 428 aa11.16□□□□□ -0.62
HDAC4-214ENST00000535493 ATP6V1FQ16864 119 aa11.16□□□□□ -0.62
HDAC4-214ENST00000535493 NRN1LQ496H8 165 aa11.16□□□□□ -0.62
HDAC4-214ENST00000535493 UTF1Q5T230 341 aa11.16□□□□□ -0.62
HDAC4-214ENST00000535493 KIR2DL5AQ8N109 375 aa11.16□□□□□ -0.62
HDAC4-214ENST00000535493 TMEM251Q8N6I4 163 aa11.16□□□□□ -0.62
HDAC4-214ENST00000535493 OR13A1Q8NGR1 328 aa11.16□□□□□ -0.62
HDAC4-214ENST00000535493 SLC25A40Q8TBP6 338 aa11.16□□□□□ -0.62
HDAC4-214ENST00000535493 COQ2Q96H96 371 aa11.16□□□□□ -0.62
HDAC4-214ENST00000535493 SIT1Q9Y3P8 196 aa11.16□□□□□ -0.62
HDAC4-214ENST00000535493 WIPI2Q9Y4P8 454 aa11.16□□□□□ -0.62
HDAC4-214ENST00000535493 ACTL6BO94805 426 aa11.15□□□□□ -0.62
HDAC4-214ENST00000535493 TIMP3P35625 211 aa11.15□□□□□ -0.62
HDAC4-214ENST00000535493 MPV17P39210 176 aa11.15□□□□□ -0.62
HDAC4-214ENST00000535493 MOB1BQ7L9L4 216 aa11.15□□□□□ -0.62
HDAC4-214ENST00000535493 BAGE3Q86Y29 109 aa11.15□□□□□ -0.62
HDAC4-214ENST00000535493 BAGE2Q86Y30 109 aa11.15□□□□□ -0.62
HDAC4-214ENST00000535493 FAM122AQ96E09 287 aa11.15□□□□□ -0.62
HDAC4-214ENST00000535493 MS4A5Q9H3V2 200 aa11.15□□□□□ -0.62
HDAC4-214ENST00000535493 HEYLQ9NQ87 328 aaPredicted RBP11.15□□□□□ -0.62
HDAC4-214ENST00000535493 HEATR1Q9H583 2144 aaKnown RBP11.15□□□□□ -0.62
HDAC4-214ENST00000535493 C17orf112F2Z3M2 114 aa11.15□□□□□ -0.62
HDAC4-214ENST00000535493 NTN3O00634 580 aaPredicted RBP11.15□□□□□ -0.62
HDAC4-214ENST00000535493 CRISP2P16562 243 aa11.15□□□□□ -0.62
HDAC4-214ENST00000535493 BTF3P20290 206 aaKnown RBP11.15□□□□□ -0.62
HDAC4-214ENST00000535493 TNFSF10P50591 281 aa11.15□□□□□ -0.62
HDAC4-214ENST00000535493 TCL1AP56279 114 aa11.15□□□□□ -0.62
HDAC4-214ENST00000535493 RPL31P62899 125 aaKnown RBP11.15□□□□□ -0.62
HDAC4-214ENST00000535493 OR1C1Q15619 314 aa11.15□□□□□ -0.62
HDAC4-214ENST00000535493 PDLIM3Q53GG5 364 aaPredicted RBP11.15□□□□□ -0.62
HDAC4-214ENST00000535493 TPTE2P1Q5T6R2 138 aa11.15□□□□□ -0.62
HDAC4-214ENST00000535493 ALKBH2Q6NS38 261 aa11.15□□□□□ -0.62
HDAC4-214ENST00000535493 TREML4Q6UXN2 200 aa11.15□□□□□ -0.62
HDAC4-214ENST00000535493 SAMD10Q9BYL1 202 aa11.15□□□□□ -0.62
HDAC4-214ENST00000535493 MRPL18Q9H0U6 180 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms