RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 A0A1W2PRM7 423 aa16.46■□□□□ 0.23
TNFRSF1A-205ENST00000534885 H7C2Y5 167 aa16.46■□□□□ 0.23
TNFRSF1A-205ENST00000534885 SSSCA1O60232 199 aa16.46■□□□□ 0.23
TNFRSF1A-205ENST00000534885 IFNA7P01567 189 aa16.46■□□□□ 0.23
TNFRSF1A-205ENST00000534885 APOA2P02652 100 aa16.46■□□□□ 0.23
TNFRSF1A-205ENST00000534885 OR9G9P0C7N8 305 aa16.46■□□□□ 0.23
TNFRSF1A-205ENST00000534885 DVL1P1P54792 670 aaPredicted RBP16.46■□□□□ 0.23
TNFRSF1A-205ENST00000534885 OPCMLQ14982 345 aa16.46■□□□□ 0.23
TNFRSF1A-205ENST00000534885 ZFP57Q9NU63 452 aa16.46■□□□□ 0.23
TNFRSF1A-205ENST00000534885 COA4Q9NYJ1 87 aa16.46■□□□□ 0.23
TNFRSF1A-205ENST00000534885 AMMECR1Q9Y4X0 333 aaPredicted RBP16.46■□□□□ 0.23
TNFRSF1A-205ENST00000534885 FASNP49327 2511 aaKnown RBP16.46■□□□□ 0.23
TNFRSF1A-205ENST00000534885 ODF3BA8MYP8 253 aa16.46■□□□□ 0.22
TNFRSF1A-205ENST00000534885 LY6LH3BQJ8 138 aa16.46■□□□□ 0.22
TNFRSF1A-205ENST00000534885 TOX4O94842 621 aa16.46■□□□□ 0.22
TNFRSF1A-205ENST00000534885 OR2F2O95006 317 aa16.46■□□□□ 0.22
TNFRSF1A-205ENST00000534885 OR2F1Q13607 317 aa16.46■□□□□ 0.22
TNFRSF1A-205ENST00000534885 ZNF345Q14585 488 aa16.46■□□□□ 0.22
TNFRSF1A-205ENST00000534885 CCDC28AQ8IWP9 274 aa16.46■□□□□ 0.22
TNFRSF1A-205ENST00000534885 RHOVQ96L33 236 aa16.46■□□□□ 0.22
TNFRSF1A-205ENST00000534885 TBX15Q96SF7 602 aa16.46■□□□□ 0.22
TNFRSF1A-205ENST00000534885 C11orf1Q9H5F2 150 aa16.46■□□□□ 0.22
TNFRSF1A-205ENST00000534885 SLC25A16P16260 332 aa16.45■□□□□ 0.22
TNFRSF1A-205ENST00000534885 USF1P22415 310 aaPredicted RBP16.45■□□□□ 0.22
TNFRSF1A-205ENST00000534885 ERVK-16P61578 105 aa16.45■□□□□ 0.22
TNFRSF1A-205ENST00000534885 DHRS7BQ6IAN0 325 aaPredicted RBP16.45■□□□□ 0.22
TNFRSF1A-205ENST00000534885 KCNRGQ8N5I3 272 aa16.45■□□□□ 0.22
TNFRSF1A-205ENST00000534885 TMEM140Q9NV12 185 aa16.45■□□□□ 0.22
TNFRSF1A-205ENST00000534885 CELSR1Q9NYQ6 3014 aa16.45■□□□□ 0.22
TNFRSF1A-205ENST00000534885 IGHV3-72A0A0B4J1Y9 119 aa16.44■□□□□ 0.22
TNFRSF1A-205ENST00000534885 SRRM4A7MD48 611 aaKnown RBP16.44■□□□□ 0.22
TNFRSF1A-205ENST00000534885 E5RGE8 158 aa16.44■□□□□ 0.22
TNFRSF1A-205ENST00000534885 EXOSC2Q13868 293 aaKnown RBP16.44■□□□□ 0.22
TNFRSF1A-205ENST00000534885 LHFPL4Q7Z7J7 247 aa16.44■□□□□ 0.22
TNFRSF1A-205ENST00000534885 RPEQ96AT9 228 aa16.44■□□□□ 0.22
TNFRSF1A-205ENST00000534885 UBQLN2Q9UHD9 624 aa16.44■□□□□ 0.22
TNFRSF1A-205ENST00000534885 TMA7Q9Y2S6 64 aaKnown RBP16.44■□□□□ 0.22
TNFRSF1A-205ENST00000534885 INSIG2Q9Y5U4 225 aa16.44■□□□□ 0.22
TNFRSF1A-205ENST00000534885 TRAV3A0A0B4J244 114 aa16.44■□□□□ 0.22
TNFRSF1A-205ENST00000534885 SNAPC5O75971 98 aa16.44■□□□□ 0.22
TNFRSF1A-205ENST00000534885 TMEM50AO95807 157 aa16.44■□□□□ 0.22
TNFRSF1A-205ENST00000534885 HTR1DP28221 377 aa16.44■□□□□ 0.22
TNFRSF1A-205ENST00000534885 CLLU1Q5K131 121 aa16.44■□□□□ 0.22
TNFRSF1A-205ENST00000534885 AQP10Q96PS8 301 aa16.44■□□□□ 0.22
TNFRSF1A-205ENST00000534885 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.44■□□□□ 0.22
TNFRSF1A-205ENST00000534885 A0A096LNT2 108 aa16.43■□□□□ 0.22
TNFRSF1A-205ENST00000534885 IGHV1-3A0A0C4DH29 117 aa16.43■□□□□ 0.22
TNFRSF1A-205ENST00000534885 A0A0D9SG52 128 aa16.43■□□□□ 0.22
TNFRSF1A-205ENST00000534885 SHOXO15266 292 aa16.43■□□□□ 0.22
TNFRSF1A-205ENST00000534885 CHST1O43916 411 aa16.43■□□□□ 0.22
TNFRSF1A-205ENST00000534885 GAPDHP04406 335 aaKnown RBP16.43■□□□□ 0.22
TNFRSF1A-205ENST00000534885 HKR1P10072 659 aa16.43■□□□□ 0.22
TNFRSF1A-205ENST00000534885 OR2B8PP59922 312 aa16.43■□□□□ 0.22
TNFRSF1A-205ENST00000534885 TAGLNQ01995 201 aaKnown RBP16.43■□□□□ 0.22
TNFRSF1A-205ENST00000534885 OR4A47Q6IF82 309 aa16.43■□□□□ 0.22
TNFRSF1A-205ENST00000534885 WASHC3Q9Y3C0 194 aa16.43■□□□□ 0.22
TNFRSF1A-205ENST00000534885 RPS10-NUDT3A0A1W2PQS6 291 aa16.42■□□□□ 0.22
TNFRSF1A-205ENST00000534885 WRBO00258 174 aa16.42■□□□□ 0.22
TNFRSF1A-205ENST00000534885 RBMXL2O75526 392 aaKnown RBP16.42■□□□□ 0.22
TNFRSF1A-205ENST00000534885 RRASP10301 218 aa16.42■□□□□ 0.22
TNFRSF1A-205ENST00000534885 PAX6P26367 422 aa16.42■□□□□ 0.22
TNFRSF1A-205ENST00000534885 PDPNQ86YL7 162 aa16.42■□□□□ 0.22
TNFRSF1A-205ENST00000534885 LRRC75A-AS1Q8N1F1 130 aa16.42■□□□□ 0.22
TNFRSF1A-205ENST00000534885 LHX4Q969G2 390 aa16.42■□□□□ 0.22
TNFRSF1A-205ENST00000534885 HARBI1Q96MB7 349 aa16.42■□□□□ 0.22
TNFRSF1A-205ENST00000534885 DPM3Q9P2X0 92 aa16.42■□□□□ 0.22
TNFRSF1A-205ENST00000534885 TET2Q6N021 2002 aaPredicted RBP16.42■□□□□ 0.22
TNFRSF1A-205ENST00000534885 HRASP01112 189 aa16.42■□□□□ 0.22
TNFRSF1A-205ENST00000534885 RPL12P30050 165 aaKnown RBP16.42■□□□□ 0.22
TNFRSF1A-205ENST00000534885 TNFRSF9Q07011 255 aa16.42■□□□□ 0.22
TNFRSF1A-205ENST00000534885 POU2AF1Q16633 256 aa16.42■□□□□ 0.22
TNFRSF1A-205ENST00000534885 TOR2AQ5JU69 321 aa16.42■□□□□ 0.22
TNFRSF1A-205ENST00000534885 TPTE2P1Q5T6R2 138 aa16.42■□□□□ 0.22
TNFRSF1A-205ENST00000534885 FLYWCH2Q96CP2 140 aaKnown RBP16.42■□□□□ 0.22
TNFRSF1A-205ENST00000534885 HSPB7Q9UBY9 170 aa16.42■□□□□ 0.22
TNFRSF1A-205ENST00000534885 HILPDAQ9Y5L2 63 aa16.42■□□□□ 0.22
TNFRSF1A-205ENST00000534885 TNCP24821 2201 aa16.42■□□□□ 0.22
TNFRSF1A-205ENST00000534885 A0A1W2PPI3 338 aa16.41■□□□□ 0.22
TNFRSF1A-205ENST00000534885 SYNGR2O43760 224 aa16.41■□□□□ 0.22
TNFRSF1A-205ENST00000534885 C4BPBP20851 252 aa16.41■□□□□ 0.22
TNFRSF1A-205ENST00000534885 NUP62P37198 522 aaPredicted RBP16.41■□□□□ 0.22
TNFRSF1A-205ENST00000534885 PAX9P55771 341 aa16.41■□□□□ 0.22
TNFRSF1A-205ENST00000534885 RELBQ01201 579 aa16.41■□□□□ 0.22
TNFRSF1A-205ENST00000534885 PAX8Q06710 450 aa16.41■□□□□ 0.22
TNFRSF1A-205ENST00000534885 TMEM177Q53S58 311 aa16.41■□□□□ 0.22
TNFRSF1A-205ENST00000534885 Q5PR19 223 aa16.41■□□□□ 0.22
TNFRSF1A-205ENST00000534885 MOB3BQ86TA1 216 aa16.41■□□□□ 0.22
TNFRSF1A-205ENST00000534885 OR4C13Q8NGP0 309 aa16.41■□□□□ 0.22
TNFRSF1A-205ENST00000534885 OSR1Q8TAX0 266 aaPredicted RBP16.41■□□□□ 0.22
TNFRSF1A-205ENST00000534885 QTRT1Q9BXR0 403 aaKnown RBP16.41■□□□□ 0.22
TNFRSF1A-205ENST00000534885 FAM90A9PA6NNJ1 464 aa16.41■□□□□ 0.22
TNFRSF1A-205ENST00000534885 PVALBP20472 110 aaPredicted RBP16.41■□□□□ 0.22
TNFRSF1A-205ENST00000534885 MC5RP33032 325 aa16.41■□□□□ 0.22
TNFRSF1A-205ENST00000534885 P2RY1P47900 373 aa16.41■□□□□ 0.22
TNFRSF1A-205ENST00000534885 RAB13P51153 203 aa16.41■□□□□ 0.22
TNFRSF1A-205ENST00000534885 CLEC9AQ6UXN8 241 aa16.41■□□□□ 0.22
TNFRSF1A-205ENST00000534885 SUN5Q8TC36 379 aa16.41■□□□□ 0.22
TNFRSF1A-205ENST00000534885 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.4■□□□□ 0.221e-6■■■□□ 16.3
TNFRSF1A-205ENST00000534885 FAM90A26D6RGX4 464 aa16.4■□□□□ 0.22
TNFRSF1A-205ENST00000534885 TXNL1O43396 289 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms