RNA–Protein interactions for RNA: ENST00000534556.1

USH1C-210, Transcript of USH1 protein network component harmonin, humanhuman

TSL 3

Gene USH1C, Length 244 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-210ENST00000534556 RAB25P57735 213 aa3.89□□□□□ -1.79
USH1C-210ENST00000534556 FXYD4P59646 89 aa3.89□□□□□ -1.79
USH1C-210ENST00000534556 UBE2KP61086 200 aa3.89□□□□□ -1.79
USH1C-210ENST00000534556 MRPS15P82914 257 aaKnown RBP3.89□□□□□ -1.79
USH1C-210ENST00000534556 DYRK1AQ13627 763 aa3.89□□□□□ -1.79
USH1C-210ENST00000534556 CDK10Q15131 360 aa3.89□□□□□ -1.79
USH1C-210ENST00000534556 PLGLAQ15195 96 aa3.89□□□□□ -1.79
USH1C-210ENST00000534556 PRSS8Q16651 343 aa3.89□□□□□ -1.79
USH1C-210ENST00000534556 TIMM50Q3ZCQ8 353 aa3.89□□□□□ -1.79
USH1C-210ENST00000534556 ZNF585BQ52M93 769 aa3.89□□□□□ -1.79
USH1C-210ENST00000534556 ACTBL2Q562R1 376 aa3.89□□□□□ -1.79
USH1C-210ENST00000534556 RNASE12Q5GAN4 147 aaKnown RBP3.89□□□□□ -1.79
USH1C-210ENST00000534556 AADACL3Q5VUY0 350 aa3.89□□□□□ -1.79
USH1C-210ENST00000534556 DHRS11Q6UWP2 260 aa3.89□□□□□ -1.79
USH1C-210ENST00000534556 IL34Q6ZMJ4 242 aa3.89□□□□□ -1.79
USH1C-210ENST00000534556 ADAMTSL5Q6ZMM2 481 aa3.89□□□□□ -1.79
USH1C-210ENST00000534556 KCTD9Q7L273 389 aa3.89□□□□□ -1.79
USH1C-210ENST00000534556 HAPLN4Q86UW8 402 aa3.89□□□□□ -1.79
USH1C-210ENST00000534556 SNX29P2Q8IUI4 249 aa3.89□□□□□ -1.79
USH1C-210ENST00000534556 TEX45Q8NA69 505 aa3.89□□□□□ -1.79
USH1C-210ENST00000534556 ADAD2Q8NCV1 583 aaKnown RBP3.89□□□□□ -1.79
USH1C-210ENST00000534556 OR4D10Q8NGI6 311 aa3.89□□□□□ -1.79
USH1C-210ENST00000534556 OR1N2Q8NGR9 330 aa3.89□□□□□ -1.79
USH1C-210ENST00000534556 MRGPRFQ96AM1 343 aa3.89□□□□□ -1.79
USH1C-210ENST00000534556 RCC1LQ96I51 464 aaKnown RBP3.89□□□□□ -1.79
USH1C-210ENST00000534556 ZNF414Q96IQ9 312 aa3.89□□□□□ -1.79
USH1C-210ENST00000534556 PRR25Q96S07 402 aa3.89□□□□□ -1.79
USH1C-210ENST00000534556 ABHD1Q96SE0 405 aa3.89□□□□□ -1.79
USH1C-210ENST00000534556 DIABLOQ9NR28 239 aa3.89□□□□□ -1.79
USH1C-210ENST00000534556 KIAA1456Q9P272 454 aa3.89□□□□□ -1.79
USH1C-210ENST00000534556 KLK11Q9UBX7 282 aa3.89□□□□□ -1.79
USH1C-210ENST00000534556 VSIG4Q9Y279 399 aa3.89□□□□□ -1.79
USH1C-210ENST00000534556 PLECQ15149 4684 aaKnown RBP3.89□□□□□ -1.79
USH1C-210ENST00000534556 AGRNO00468 2067 aa3.88□□□□□ -1.79
USH1C-210ENST00000534556 SACSQ9NZJ4 4579 aa3.88□□□□□ -1.79
USH1C-210ENST00000534556 TRBV9A0A0B4J1U6 114 aa3.88□□□□□ -1.79
USH1C-210ENST00000534556 DBX1A6NMT0 343 aa3.88□□□□□ -1.79
USH1C-210ENST00000534556 M0QYG6 137 aa3.88□□□□□ -1.79
USH1C-210ENST00000534556 RRP9O43818 475 aaKnown RBP3.88□□□□□ -1.79
USH1C-210ENST00000534556 SCGNO76038 276 aa3.88□□□□□ -1.79
USH1C-210ENST00000534556 S1PR2O95136 353 aa3.88□□□□□ -1.79
USH1C-210ENST00000534556 IGKV1-39P01597 117 aa3.88□□□□□ -1.79
USH1C-210ENST00000534556 APOA1P02647 267 aa3.88□□□□□ -1.79
USH1C-210ENST00000534556 TRGV3P03979 118 aa3.88□□□□□ -1.79
USH1C-210ENST00000534556 IGKV1D-39P04432 117 aa3.88□□□□□ -1.79
USH1C-210ENST00000534556 LGALS1P09382 135 aaKnown RBP3.88□□□□□ -1.79
USH1C-210ENST00000534556 CTXN2P0C2S0 81 aa3.88□□□□□ -1.79
USH1C-210ENST00000534556 AREGP15514 252 aa3.88□□□□□ -1.79
USH1C-210ENST00000534556 RPA2P15927 270 aa3.88□□□□□ -1.79
USH1C-210ENST00000534556 HLA-DMAP28067 261 aa3.88□□□□□ -1.79
USH1C-210ENST00000534556 HRH1P35367 487 aa3.88□□□□□ -1.79
USH1C-210ENST00000534556 RANBP1P43487 201 aa3.88□□□□□ -1.79
USH1C-210ENST00000534556 LGALS7P47929 136 aa3.88□□□□□ -1.79
USH1C-210ENST00000534556 TPPP2P59282 170 aa3.88□□□□□ -1.79
USH1C-210ENST00000534556 ZNF616Q08AN1 781 aa3.88□□□□□ -1.79
USH1C-210ENST00000534556 ARL6IP1Q15041 203 aa3.88□□□□□ -1.79
USH1C-210ENST00000534556 TNXAQ16473 311 aa3.88□□□□□ -1.79
USH1C-210ENST00000534556 TMEM69Q5SWH9 247 aa3.88□□□□□ -1.79
USH1C-210ENST00000534556 C11orf87Q6NUJ2 197 aa3.88□□□□□ -1.79
USH1C-210ENST00000534556 SSX9Q7RTT3 188 aa3.88□□□□□ -1.79
USH1C-210ENST00000534556 TMEM17Q86X19 198 aa3.88□□□□□ -1.79
USH1C-210ENST00000534556 CROCCP3Q8IVE0 287 aa3.88□□□□□ -1.79
USH1C-210ENST00000534556 LAX1Q8IWV1 398 aa3.88□□□□□ -1.79
USH1C-210ENST00000534556 POC5Q8NA72 575 aa3.88□□□□□ -1.79
USH1C-210ENST00000534556 OR52I2Q8NH67 350 aa3.88□□□□□ -1.79
USH1C-210ENST00000534556 OSR1Q8TAX0 266 aaPredicted RBP3.88□□□□□ -1.79
USH1C-210ENST00000534556 TMEM167AQ8TBQ9 72 aa3.88□□□□□ -1.79
USH1C-210ENST00000534556 DYNC2LI1Q8TCX1 351 aa3.88□□□□□ -1.79
USH1C-210ENST00000534556 MRAPQ8TCY5 172 aa3.88□□□□□ -1.79
USH1C-210ENST00000534556 ABHD5Q8WTS1 349 aa3.88□□□□□ -1.79
USH1C-210ENST00000534556 TCTEX1D2Q8WW35 142 aa3.88□□□□□ -1.79
USH1C-210ENST00000534556 GIMAP1Q8WWP7 306 aa3.88□□□□□ -1.79
USH1C-210ENST00000534556 SRSF12Q8WXF0 261 aaKnown RBP3.88□□□□□ -1.79
USH1C-210ENST00000534556 MOB3AQ96BX8 217 aa3.88□□□□□ -1.79
USH1C-210ENST00000534556 KCTD12Q96CX2 325 aaKnown RBP3.88□□□□□ -1.79
USH1C-210ENST00000534556 S100A16Q96FQ6 103 aaKnown RBP3.88□□□□□ -1.79
USH1C-210ENST00000534556 FANCD2OSQ96PS1 177 aa3.88□□□□□ -1.79
USH1C-210ENST00000534556 ZNF2Q9BSG1 426 aaPredicted RBP3.88□□□□□ -1.79
USH1C-210ENST00000534556 MRPS26Q9BYN8 205 aaKnown RBP3.88□□□□□ -1.79
USH1C-210ENST00000534556 TINAGL1Q9GZM7 467 aaPredicted RBP3.88□□□□□ -1.79
USH1C-210ENST00000534556 SLC5A7Q9GZV3 580 aa3.88□□□□□ -1.79
USH1C-210ENST00000534556 EHFQ9NZC4 300 aa3.88□□□□□ -1.79
USH1C-210ENST00000534556 MRPS7Q9Y2R9 242 aaKnown RBP3.88□□□□□ -1.79
USH1C-210ENST00000534556 LSM4Q9Y4Z0 139 aaKnown RBP3.88□□□□□ -1.79
USH1C-210ENST00000534556 RBM7Q9Y580 266 aaKnown RBP3.88□□□□□ -1.79
USH1C-210ENST00000534556 S4R3C0 116 aa3.88□□□□□ -1.79
USH1C-210ENST00000534556 ANKRD34BA5PLL1 514 aa3.87□□□□□ -1.79
USH1C-210ENST00000534556 IZUMO1RA6ND01 250 aa3.87□□□□□ -1.79
USH1C-210ENST00000534556 SEC14L6B5MCN3 397 aa3.87□□□□□ -1.79
USH1C-210ENST00000534556 TMEM127O75204 238 aa3.87□□□□□ -1.79
USH1C-210ENST00000534556 PGLYRP1O75594 196 aaPredicted RBP3.87□□□□□ -1.79
USH1C-210ENST00000534556 KBTBD11O94819 623 aa3.87□□□□□ -1.79
USH1C-210ENST00000534556 NDUFB8O95169 186 aa3.87□□□□□ -1.79
USH1C-210ENST00000534556 CNIH1O95406 144 aa3.87□□□□□ -1.79
USH1C-210ENST00000534556 BRI3O95415 125 aa3.87□□□□□ -1.79
USH1C-210ENST00000534556 RLN1P04808 185 aa3.87□□□□□ -1.79
USH1C-210ENST00000534556 REG1AP05451 166 aa3.87□□□□□ -1.79
USH1C-210ENST00000534556 OR9G9P0C7N8 305 aa3.87□□□□□ -1.79
USH1C-210ENST00000534556 ZNF735P0CB33 412 aa3.87□□□□□ -1.79
USH1C-210ENST00000534556 RRASP10301 218 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms