RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 TRAM1Q15629 374 aa13.58□□□□□ -0.24
UBXN1-216ENST00000533908 FAM223AQ8IWN6 122 aa13.58□□□□□ -0.24
UBXN1-216ENST00000533908 TTC9CQ8N5M4 171 aa13.58□□□□□ -0.24
UBXN1-216ENST00000533908 NKX1-2Q9UD57 310 aaPredicted RBP13.58□□□□□ -0.24
UBXN1-216ENST00000533908 RBM7Q9Y580 266 aaKnown RBP13.58□□□□□ -0.24
UBXN1-216ENST00000533908 HMX3A6NHT5 357 aa13.57□□□□□ -0.24
UBXN1-216ENST00000533908 C2orf70A6NJV1 201 aa13.57□□□□□ -0.24
UBXN1-216ENST00000533908 OR11H12B2RN74 326 aa13.57□□□□□ -0.24
UBXN1-216ENST00000533908 MPPED1O15442 326 aa13.57□□□□□ -0.24
UBXN1-216ENST00000533908 OR2J3O76001 311 aa13.57□□□□□ -0.24
UBXN1-216ENST00000533908 JTBO76095 146 aa13.57□□□□□ -0.24
UBXN1-216ENST00000533908 FOLR2P14207 255 aa13.57□□□□□ -0.24
UBXN1-216ENST00000533908 HIST1H1DP16402 221 aaKnown RBP13.57□□□□□ -0.24
UBXN1-216ENST00000533908 MAP2K4P45985 399 aa13.57□□□□□ -0.24
UBXN1-216ENST00000533908 RPL30P62888 115 aaKnown RBP13.57□□□□□ -0.24
UBXN1-216ENST00000533908 MRPS15P82914 257 aaKnown RBP13.57□□□□□ -0.24
UBXN1-216ENST00000533908 MLLT11Q13015 90 aaPredicted RBP13.57□□□□□ -0.24
UBXN1-216ENST00000533908 LAX1Q8IWV1 398 aa13.57□□□□□ -0.24
UBXN1-216ENST00000533908 NECAP1Q8NC96 275 aa13.57□□□□□ -0.24
UBXN1-216ENST00000533908 OSR1Q8TAX0 266 aaPredicted RBP13.57□□□□□ -0.24
UBXN1-216ENST00000533908 WDR89Q96FK6 387 aaPredicted RBP13.57□□□□□ -0.24
UBXN1-216ENST00000533908 ADTRPQ96IZ2 230 aa13.57□□□□□ -0.24
UBXN1-216ENST00000533908 GINS4Q9BRT9 223 aa13.57□□□□□ -0.24
UBXN1-216ENST00000533908 E7EUB6 86 aa13.56□□□□□ -0.24
UBXN1-216ENST00000533908 OR2C1O95371 312 aa13.56□□□□□ -0.24
UBXN1-216ENST00000533908 PSMA1P25786 263 aaKnown RBP13.56□□□□□ -0.24
UBXN1-216ENST00000533908 CDK10Q15131 360 aa13.56□□□□□ -0.24
UBXN1-216ENST00000533908 Q6ZS49 121 aa13.56□□□□□ -0.24
UBXN1-216ENST00000533908 MGLLQ99685 303 aa13.56□□□□□ -0.24
UBXN1-216ENST00000533908 SRD5A3Q9H8P0 318 aa13.56□□□□□ -0.24
UBXN1-216ENST00000533908 ZC4H2Q9NQZ6 224 aa13.56□□□□□ -0.24
UBXN1-216ENST00000533908 SLC2A8Q9NY64 477 aa13.56□□□□□ -0.24
UBXN1-216ENST00000533908 A0A1B0GW64 132 aa13.55□□□□□ -0.24
UBXN1-216ENST00000533908 FCGR3BO75015 233 aa13.55□□□□□ -0.24
UBXN1-216ENST00000533908 IGLV2-14P01704 120 aa13.55□□□□□ -0.24
UBXN1-216ENST00000533908 IL6RP08887 468 aaPredicted RBP13.55□□□□□ -0.24
UBXN1-216ENST00000533908 GUCA2BQ16661 112 aa13.55□□□□□ -0.24
UBXN1-216ENST00000533908 C15orf32Q32M92 178 aa13.55□□□□□ -0.24
UBXN1-216ENST00000533908 VKORC1L1Q8N0U8 176 aa13.55□□□□□ -0.24
UBXN1-216ENST00000533908 IL17DQ8TAD2 202 aa13.55□□□□□ -0.24
UBXN1-216ENST00000533908 CACNG8Q8WXS5 425 aa13.55□□□□□ -0.24
UBXN1-216ENST00000533908 KCTD12Q96CX2 325 aaKnown RBP13.55□□□□□ -0.24
UBXN1-216ENST00000533908 SPIN2AQ99865 258 aa13.55□□□□□ -0.24
UBXN1-216ENST00000533908 SPIN2BQ9BPZ2 258 aa13.55□□□□□ -0.24
UBXN1-216ENST00000533908 TPRKBQ9Y3C4 175 aa13.55□□□□□ -0.24
UBXN1-216ENST00000533908 TEX22C9J3V5 150 aa13.54□□□□□ -0.24
UBXN1-216ENST00000533908 RGS10O43665 173 aa13.54□□□□□ -0.24
UBXN1-216ENST00000533908 IGHV3-23P01764 117 aa13.54□□□□□ -0.24
UBXN1-216ENST00000533908 PSMD7P51665 324 aa13.54□□□□□ -0.24
UBXN1-216ENST00000533908 BRWD1-AS2P59051 145 aa13.54□□□□□ -0.24
UBXN1-216ENST00000533908 SSX1Q16384 188 aa13.54□□□□□ -0.24
UBXN1-216ENST00000533908 OR2B11Q5JQS5 317 aa13.54□□□□□ -0.24
UBXN1-216ENST00000533908 MMD2Q8IY49 270 aa13.54□□□□□ -0.24
UBXN1-216ENST00000533908 DYNLRB2Q8TF09 96 aa13.54□□□□□ -0.24
UBXN1-216ENST00000533908 NRG4Q8WWG1 115 aa13.54□□□□□ -0.24
UBXN1-216ENST00000533908 FANCD2OSQ96PS1 177 aa13.54□□□□□ -0.24
UBXN1-216ENST00000533908 DCUN1D5Q9BTE7 237 aa13.54□□□□□ -0.24
UBXN1-216ENST00000533908 ACOT13Q9NPJ3 140 aa13.54□□□□□ -0.24
UBXN1-216ENST00000533908 S4R3C0 116 aa13.54□□□□□ -0.24
UBXN1-216ENST00000533908 IFITM5A6NNB3 132 aa13.53□□□□□ -0.24
UBXN1-216ENST00000533908 LGALS9O00182 355 aa13.53□□□□□ -0.24
UBXN1-216ENST00000533908 GGCTO75223 188 aaKnown RBP13.53□□□□□ -0.24
UBXN1-216ENST00000533908 TUSC2O75896 110 aa13.53□□□□□ -0.24
UBXN1-216ENST00000533908 ACTL6BO94805 426 aa13.53□□□□□ -0.24
UBXN1-216ENST00000533908 NDUFB8O95169 186 aa13.53□□□□□ -0.24
UBXN1-216ENST00000533908 RAB6AP20340 208 aa13.53□□□□□ -0.24
UBXN1-216ENST00000533908 CBLN1P23435 193 aa13.53□□□□□ -0.24
UBXN1-216ENST00000533908 GADD45AP24522 165 aa13.53□□□□□ -0.24
UBXN1-216ENST00000533908 AQP4P55087 323 aa13.53□□□□□ -0.24
UBXN1-216ENST00000533908 ARFRP1Q13795 201 aa13.53□□□□□ -0.24
UBXN1-216ENST00000533908 NR2C2APQ86WQ0 139 aa13.53□□□□□ -0.24
UBXN1-216ENST00000533908 CCDC140Q96MF4 163 aa13.53□□□□□ -0.24
UBXN1-216ENST00000533908 CCDC90BQ9GZT6 254 aa13.53□□□□□ -0.24
UBXN1-216ENST00000533908 OR51E2Q9H255 320 aa13.53□□□□□ -0.24
UBXN1-216ENST00000533908 FBXL7Q9UJT9 491 aa13.53□□□□□ -0.24
UBXN1-216ENST00000533908 ALMS1Q8TCU4 4167 aa13.52□□□□□ -0.24
UBXN1-216ENST00000533908 TRAV1-2A0A0B4J238 106 aa13.52□□□□□ -0.25
UBXN1-216ENST00000533908 IGKV1D-13A0A0B4J2D9 117 aa13.52□□□□□ -0.25
UBXN1-216ENST00000533908 HLA-DQB1P01920 261 aa13.52□□□□□ -0.25
UBXN1-216ENST00000533908 IGKV1-13P0DP09 117 aa13.52□□□□□ -0.25
UBXN1-216ENST00000533908 NFYAP23511 347 aaPredicted RBP13.52□□□□□ -0.25
UBXN1-216ENST00000533908 CRHBPP24387 322 aa13.52□□□□□ -0.25
UBXN1-216ENST00000533908 TALDO1P37837 337 aa13.52□□□□□ -0.25
UBXN1-216ENST00000533908 GPHB5Q86YW7 130 aa13.52□□□□□ -0.25
UBXN1-216ENST00000533908 TMEM61Q8N0U2 210 aa13.52□□□□□ -0.25
UBXN1-216ENST00000533908 ZNF645Q8N7E2 425 aa13.52□□□□□ -0.25
UBXN1-216ENST00000533908 TECRQ9NZ01 308 aaKnown RBP13.52□□□□□ -0.25
UBXN1-216ENST00000533908 ZNF257Q9Y2Q1 563 aa13.52□□□□□ -0.25
UBXN1-216ENST00000533908 RBMX2Q9Y388 322 aaKnown RBP13.52□□□□□ -0.25
UBXN1-216ENST00000533908 ANKRD65E5RJM6 399 aa13.51□□□□□ -0.25
UBXN1-216ENST00000533908 MYOD1P15172 320 aa13.51□□□□□ -0.25
UBXN1-216ENST00000533908 AREGP15514 252 aa13.51□□□□□ -0.25
UBXN1-216ENST00000533908 EIF4EBP1Q13541 118 aaPredicted RBP13.51□□□□□ -0.25
UBXN1-216ENST00000533908 CDNFQ49AH0 187 aa13.51□□□□□ -0.25
UBXN1-216ENST00000533908 CLEC19AQ6UXS0 136 aa13.51□□□□□ -0.25
UBXN1-216ENST00000533908 KCTD9Q7L273 389 aa13.51□□□□□ -0.25
UBXN1-216ENST00000533908 PRSS48Q7RTY5 328 aa13.51□□□□□ -0.25
UBXN1-216ENST00000533908 GPHA2Q96T91 129 aa13.51□□□□□ -0.25
UBXN1-216ENST00000533908 ST6GALNAC5Q9BVH7 336 aa13.51□□□□□ -0.25
UBXN1-216ENST00000533908 VCXQ9H320 206 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms