RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 HAND1O96004 215 aa16.2■□□□□ 0.18
CAPN1-226ENST00000533820 TBC1D28Q2M2D7 210 aa16.2■□□□□ 0.18
CAPN1-226ENST00000533820 GBGT1Q8N5D6 347 aa16.2■□□□□ 0.18
CAPN1-226ENST00000533820 BCL2L2Q92843 193 aaPredicted RBP16.2■□□□□ 0.18
CAPN1-226ENST00000533820 CDH20Q9HBT6 801 aa16.2■□□□□ 0.18
CAPN1-226ENST00000533820 NAGKQ9UJ70 344 aa16.2■□□□□ 0.18
CAPN1-226ENST00000533820 COL8A2P25067 703 aa16.2■□□□□ 0.18
CAPN1-226ENST00000533820 HOXC12P31275 282 aa16.2■□□□□ 0.18
CAPN1-226ENST00000533820 SSTR5P35346 364 aa16.2■□□□□ 0.18
CAPN1-226ENST00000533820 GALMQ96C23 342 aa16.2■□□□□ 0.18
CAPN1-226ENST00000533820 TMEM204Q9BSN7 226 aa16.2■□□□□ 0.18
CAPN1-226ENST00000533820 ABI3Q9P2A4 366 aa16.2■□□□□ 0.18
CAPN1-226ENST00000533820 TRBV24-1A0A075B6N3 115 aa16.2■□□□□ 0.18
CAPN1-226ENST00000533820 FAM3BP58499 235 aaPredicted RBP16.2■□□□□ 0.18
CAPN1-226ENST00000533820 TMEM14EPQ6UXP3 125 aa16.2■□□□□ 0.18
CAPN1-226ENST00000533820 NUDT11Q96G61 164 aa16.2■□□□□ 0.18
CAPN1-226ENST00000533820 OR5B12Q96R08 314 aa16.2■□□□□ 0.18
CAPN1-226ENST00000533820 P2RX4Q99571 388 aa16.2■□□□□ 0.18
CAPN1-226ENST00000533820 PPP5D1E7EU14 171 aa16.19■□□□□ 0.18
CAPN1-226ENST00000533820 AGFG2O95081 481 aa16.19■□□□□ 0.18
CAPN1-226ENST00000533820 ARG2P78540 354 aa16.19■□□□□ 0.18
CAPN1-226ENST00000533820 RNFT1Q5M7Z0 435 aa16.19■□□□□ 0.18
CAPN1-226ENST00000533820 OR10P1Q8NGE3 313 aa16.19■□□□□ 0.18
CAPN1-226ENST00000533820 SH3BGRL2Q9UJC5 107 aa16.19■□□□□ 0.18
CAPN1-226ENST00000533820 FUT9Q9Y231 359 aa16.19■□□□□ 0.18
CAPN1-226ENST00000533820 POLDIP2Q9Y2S7 368 aa16.19■□□□□ 0.18
CAPN1-226ENST00000533820 PGPEP1LA6NFU8 196 aa16.19■□□□□ 0.18
CAPN1-226ENST00000533820 J3QW42 95 aa16.19■□□□□ 0.18
CAPN1-226ENST00000533820 KBTBD11O94819 623 aa16.19■□□□□ 0.18
CAPN1-226ENST00000533820 HBZP02008 142 aa16.19■□□□□ 0.18
CAPN1-226ENST00000533820 MPV17P39210 176 aa16.19■□□□□ 0.18
CAPN1-226ENST00000533820 PSG7Q13046 419 aa16.19■□□□□ 0.18
CAPN1-226ENST00000533820 MMDQ15546 238 aa16.19■□□□□ 0.18
CAPN1-226ENST00000533820 PRAMEF6Q5VXH4 476 aa16.19■□□□□ 0.18
CAPN1-226ENST00000533820 STRADBQ9C0K7 418 aa16.19■□□□□ 0.18
CAPN1-226ENST00000533820 HIPK2Q9H2X6 1198 aa16.19■□□□□ 0.18
CAPN1-226ENST00000533820 TMEM242Q9NWH2 141 aa16.19■□□□□ 0.18
CAPN1-226ENST00000533820 EP300Q09472 2414 aaPredicted RBP16.18■□□□□ 0.18
CAPN1-226ENST00000533820 PFN1P07737 140 aaKnown RBP16.18■□□□□ 0.18
CAPN1-226ENST00000533820 CYP2G1PQ6ZSU1 146 aa16.18■□□□□ 0.18
CAPN1-226ENST00000533820 MOB1BQ7L9L4 216 aa16.18■□□□□ 0.18
CAPN1-226ENST00000533820 NINJ1Q92982 152 aa16.18■□□□□ 0.18
CAPN1-226ENST00000533820 METRNQ9UJH8 293 aa16.18■□□□□ 0.18
CAPN1-226ENST00000533820 TRAV38-1A0A0B4J264 116 aa16.18■□□□□ 0.18
CAPN1-226ENST00000533820 LRRC30A6NM36 301 aa16.18■□□□□ 0.18
CAPN1-226ENST00000533820 KLF3P57682 345 aaPredicted RBP16.18■□□□□ 0.18
CAPN1-226ENST00000533820 BRWD1-AS2P59051 145 aa16.18■□□□□ 0.18
CAPN1-226ENST00000533820 GNB2P62879 340 aa16.18■□□□□ 0.18
CAPN1-226ENST00000533820 EDDM3AQ14507 147 aa16.18■□□□□ 0.18
CAPN1-226ENST00000533820 CST9LP1Q5W188 147 aa16.18■□□□□ 0.18
CAPN1-226ENST00000533820 TOMM20LQ6UXN7 152 aa16.18■□□□□ 0.18
CAPN1-226ENST00000533820 Q6ZR03 302 aa16.18■□□□□ 0.18
CAPN1-226ENST00000533820 ZNF709Q8N972 641 aa16.18■□□□□ 0.18
CAPN1-226ENST00000533820 CACNA1GO43497 2377 aa16.18■□□□□ 0.18
CAPN1-226ENST00000533820 UBE2NP61088 152 aaKnown RBP16.17■□□□□ 0.18
CAPN1-226ENST00000533820 PSG11Q9UQ72 335 aa16.17■□□□□ 0.18
CAPN1-226ENST00000533820 CNOT1A5YKK6 2376 aaKnown RBP16.17■□□□□ 0.18
CAPN1-226ENST00000533820 NPIPB11E5RHQ5 1161 aa16.17■□□□□ 0.18
CAPN1-226ENST00000533820 ERVK11-1P61568 191 aa16.17■□□□□ 0.18
CAPN1-226ENST00000533820 MSMO1Q15800 293 aa16.17■□□□□ 0.18
CAPN1-226ENST00000533820 H2BFWTQ7Z2G1 175 aa16.17■□□□□ 0.18
CAPN1-226ENST00000533820 ZNF645Q8N7E2 425 aa16.17■□□□□ 0.18
CAPN1-226ENST00000533820 GP6Q9HCN6 339 aa16.17■□□□□ 0.18
CAPN1-226ENST00000533820 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.17■□□□□ 0.18
CAPN1-226ENST00000533820 ROS1P08922 2347 aa16.17■□□□□ 0.18
CAPN1-226ENST00000533820 A0A1B0GUS0 222 aa16.17■□□□□ 0.18
CAPN1-226ENST00000533820 ZNF320A2RRD8 509 aa16.17■□□□□ 0.18
CAPN1-226ENST00000533820 GYPAP02724 150 aa16.17■□□□□ 0.18
CAPN1-226ENST00000533820 SP1P08047 785 aa16.17■□□□□ 0.18
CAPN1-226ENST00000533820 EDDM3BP56851 147 aa16.17■□□□□ 0.18
CAPN1-226ENST00000533820 NANOS1Q8WY41 292 aaKnown RBP16.17■□□□□ 0.18
CAPN1-226ENST00000533820 SLC35E1Q96K37 410 aa16.17■□□□□ 0.18
CAPN1-226ENST00000533820 DERL1Q9BUN8 251 aa16.17■□□□□ 0.18
CAPN1-226ENST00000533820 MBNL3Q9NUK0 354 aaKnown RBP16.17■□□□□ 0.18
CAPN1-226ENST00000533820 HSPB7Q9UBY9 170 aa16.17■□□□□ 0.18
CAPN1-226ENST00000533820 LOC105371242A0A075B767 164 aa16.16■□□□□ 0.18
CAPN1-226ENST00000533820 A0A0U1RQK1 487 aa16.16■□□□□ 0.18
CAPN1-226ENST00000533820 CTXND1A0A1B0GTU2 59 aa16.16■□□□□ 0.18
CAPN1-226ENST00000533820 WISP2O76076 250 aa16.16■□□□□ 0.18
CAPN1-226ENST00000533820 NDUFB8O95169 186 aa16.16■□□□□ 0.18
CAPN1-226ENST00000533820 TDGF1P13385 188 aa16.16■□□□□ 0.18
CAPN1-226ENST00000533820 MIEN1Q9BRT3 115 aa16.16■□□□□ 0.18
CAPN1-226ENST00000533820 TMEM147Q9BVK8 224 aa16.16■□□□□ 0.18
CAPN1-226ENST00000533820 CTDSP1Q9GZU7 261 aa16.16■□□□□ 0.18
CAPN1-226ENST00000533820 ARRDC1-AS1Q9H2J1 176 aa16.16■□□□□ 0.18
CAPN1-226ENST00000533820 SRD5A3Q9H8P0 318 aa16.16■□□□□ 0.18
CAPN1-226ENST00000533820 SEPSECSQ9HD40 501 aaKnown RBP16.16■□□□□ 0.18
CAPN1-226ENST00000533820 SPRR3Q9UBC9 169 aa16.16■□□□□ 0.18
CAPN1-226ENST00000533820 LINC00473A8K010 186 aa16.16■□□□□ 0.18
CAPN1-226ENST00000533820 RNF212BA8MTL3 300 aa16.16■□□□□ 0.18
CAPN1-226ENST00000533820 FABP6P51161 128 aa16.16■□□□□ 0.18
CAPN1-226ENST00000533820 VKORC1L1Q8N0U8 176 aa16.16■□□□□ 0.18
CAPN1-226ENST00000533820 STPG4Q8N801 248 aa16.16■□□□□ 0.18
CAPN1-226ENST00000533820 SLC24A4Q8NFF2 622 aa16.16■□□□□ 0.18
CAPN1-226ENST00000533820 NPCDR1Q9BY65 106 aa16.16■□□□□ 0.18
CAPN1-226ENST00000533820 PATZ1Q9HBE1 687 aaKnown RBP16.16■□□□□ 0.18
CAPN1-226ENST00000533820 TMEM30CPA0ZSE6 113 aa16.15■□□□□ 0.18
CAPN1-226ENST00000533820 CNEP1R1Q8N9A8 125 aa16.15■□□□□ 0.18
CAPN1-226ENST00000533820 CDX2Q99626 313 aaPredicted RBP16.15■□□□□ 0.18
CAPN1-226ENST00000533820 TECTAO75443 2155 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms