RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 NBR2O15453 112 aa9.49□□□□□ -0.89
COMMD9-208ENST00000533643 TCF21O43680 179 aa9.49□□□□□ -0.89
COMMD9-208ENST00000533643 GPR137BO60478 399 aa9.49□□□□□ -0.89
COMMD9-208ENST00000533643 CDS2O95674 445 aa9.49□□□□□ -0.89
COMMD9-208ENST00000533643 AMY1AP04745 511 aa9.49□□□□□ -0.89
COMMD9-208ENST00000533643 IL5P05113 134 aa9.49□□□□□ -0.89
COMMD9-208ENST00000533643 ANXA3P12429 323 aa9.49□□□□□ -0.89
COMMD9-208ENST00000533643 UBA52P62987 128 aaKnown RBP9.49□□□□□ -0.89
COMMD9-208ENST00000533643 OXA1LQ15070 435 aa9.49□□□□□ -0.89
COMMD9-208ENST00000533643 MMDQ15546 238 aa9.49□□□□□ -0.89
COMMD9-208ENST00000533643 POU2AF1Q16633 256 aa9.49□□□□□ -0.89
COMMD9-208ENST00000533643 ANKRD55Q3KP44 614 aa9.49□□□□□ -0.89
COMMD9-208ENST00000533643 C4orf46Q504U0 113 aa9.49□□□□□ -0.89
COMMD9-208ENST00000533643 LIAT1Q6ZQX7 453 aa9.49□□□□□ -0.89
COMMD9-208ENST00000533643 C16orf82Q7Z2V1 217 aa9.49□□□□□ -0.89
COMMD9-208ENST00000533643 LYG2Q86SG7 212 aa9.49□□□□□ -0.89
COMMD9-208ENST00000533643 SELENOHQ8IZQ5 122 aaKnown RBP9.49□□□□□ -0.89
COMMD9-208ENST00000533643 VKORC1L1Q8N0U8 176 aa9.49□□□□□ -0.89
COMMD9-208ENST00000533643 OR8H1Q8NGG4 311 aa9.49□□□□□ -0.89
COMMD9-208ENST00000533643 OR52B4Q8NGK2 314 aa9.49□□□□□ -0.89
COMMD9-208ENST00000533643 LHFPL5Q8TAF8 219 aa9.49□□□□□ -0.89
COMMD9-208ENST00000533643 R3HDM4Q96D70 268 aa9.49□□□□□ -0.89
COMMD9-208ENST00000533643 TMEM56Q96MV1 263 aa9.49□□□□□ -0.89
COMMD9-208ENST00000533643 JMJD8Q96S16 334 aa9.49□□□□□ -0.89
COMMD9-208ENST00000533643 SEC22CQ9BRL7 303 aa9.49□□□□□ -0.89
COMMD9-208ENST00000533643 COMMD9Q9P000 198 aa9.49□□□□□ -0.89
COMMD9-208ENST00000533643 MOB4Q9Y3A3 225 aa9.49□□□□□ -0.89
COMMD9-208ENST00000533643 TMEM56-RWDD3S4R434 201 aa9.49□□□□□ -0.89
COMMD9-208ENST00000533643 RRHO14718 337 aa9.48□□□□□ -0.89
COMMD9-208ENST00000533643 SLC25A17O43808 307 aa9.48□□□□□ -0.89
COMMD9-208ENST00000533643 NDUFA3O95167 84 aa9.48□□□□□ -0.89
COMMD9-208ENST00000533643 SPDEFO95238 335 aa9.48□□□□□ -0.89
COMMD9-208ENST00000533643 HRASP01112 189 aa9.48□□□□□ -0.89
COMMD9-208ENST00000533643 KRASP01116 189 aa9.48□□□□□ -0.89
COMMD9-208ENST00000533643 HLA-AP01891 365 aaKnown RBP9.48□□□□□ -0.89
COMMD9-208ENST00000533643 CRYGBP07316 175 aa9.48□□□□□ -0.89
COMMD9-208ENST00000533643 RNASE1P07998 156 aaKnown RBP9.48□□□□□ -0.89
COMMD9-208ENST00000533643 RPA2P15927 270 aa9.48□□□□□ -0.89
COMMD9-208ENST00000533643 NQO2P16083 231 aa9.48□□□□□ -0.89
COMMD9-208ENST00000533643 UBE2KP61086 200 aa9.48□□□□□ -0.89
COMMD9-208ENST00000533643 C5orf64Q2M2E5 130 aa9.48□□□□□ -0.89
COMMD9-208ENST00000533643 TRIM16LQ309B1 348 aa9.48□□□□□ -0.89
COMMD9-208ENST00000533643 LURAP1LQ8IV03 231 aa9.48□□□□□ -0.89
COMMD9-208ENST00000533643 FAM71E2Q8N5Q1 922 aa9.48□□□□□ -0.89
COMMD9-208ENST00000533643 C5orf56Q8N8D9 126 aa9.48□□□□□ -0.89
COMMD9-208ENST00000533643 Q8N9W7 124 aa9.48□□□□□ -0.89
COMMD9-208ENST00000533643 CASTOR1Q8WTX7 329 aa9.48□□□□□ -0.89
COMMD9-208ENST00000533643 CHPT1Q8WUD6 406 aa9.48□□□□□ -0.89
COMMD9-208ENST00000533643 SEC22AQ96IW7 307 aa9.48□□□□□ -0.89
COMMD9-208ENST00000533643 RHOVQ96L33 236 aa9.48□□□□□ -0.89
COMMD9-208ENST00000533643 C1RLQ9NZP8 487 aa9.48□□□□□ -0.89
COMMD9-208ENST00000533643 FCN1O00602 326 aa9.47□□□□□ -0.89
COMMD9-208ENST00000533643 FGF16O43320 207 aa9.47□□□□□ -0.89
COMMD9-208ENST00000533643 DUS4LO95620 317 aaKnown RBP9.47□□□□□ -0.89
COMMD9-208ENST00000533643 DHFRP00374 187 aa9.47□□□□□ -0.89
COMMD9-208ENST00000533643 IGKV1-5P01602 117 aa9.47□□□□□ -0.89
COMMD9-208ENST00000533643 SAA1P0DJI8 122 aaPredicted RBP9.47□□□□□ -0.89
COMMD9-208ENST00000533643 G6PCP35575 357 aa9.47□□□□□ -0.89
COMMD9-208ENST00000533643 SRSF2Q01130 221 aaKnown RBP9.47□□□□□ -0.89
COMMD9-208ENST00000533643 MRGPRG-AS1Q2M3A8 158 aa9.47□□□□□ -0.89
COMMD9-208ENST00000533643 VMA21Q3ZAQ7 101 aa9.47□□□□□ -0.89
COMMD9-208ENST00000533643 TMEM268Q5VZI3 342 aa9.47□□□□□ -0.89
COMMD9-208ENST00000533643 SSX9Q7RTT3 188 aa9.47□□□□□ -0.89
COMMD9-208ENST00000533643 ZNF695Q8IW36 515 aa9.47□□□□□ -0.89
COMMD9-208ENST00000533643 PUSL1Q8N0Z8 303 aaKnown RBP9.47□□□□□ -0.89
COMMD9-208ENST00000533643 LGI3Q8N145 548 aa9.47□□□□□ -0.89
COMMD9-208ENST00000533643 LRTM2Q8N967 370 aa9.47□□□□□ -0.89
COMMD9-208ENST00000533643 TEX45Q8NA69 505 aa9.47□□□□□ -0.89
COMMD9-208ENST00000533643 ZNF431Q8TF32 576 aaPredicted RBP9.47□□□□□ -0.89
COMMD9-208ENST00000533643 RBPMSQ93062 196 aaKnown RBP9.47□□□□□ -0.89
COMMD9-208ENST00000533643 IL22RA2Q969J5 263 aa9.47□□□□□ -0.89
COMMD9-208ENST00000533643 AIFM2Q9BRQ8 373 aa9.47□□□□□ -0.89
COMMD9-208ENST00000533643 FBXL15Q9H469 300 aa9.47□□□□□ -0.89
COMMD9-208ENST00000533643 RAB18Q9NP72 206 aa9.47□□□□□ -0.89
COMMD9-208ENST00000533643 TPSG1Q9NRR2 321 aa9.47□□□□□ -0.89
COMMD9-208ENST00000533643 KIAA1456Q9P272 454 aa9.47□□□□□ -0.89
COMMD9-208ENST00000533643 METTL1Q9UBP6 276 aaKnown RBP9.47□□□□□ -0.89
COMMD9-208ENST00000533643 SIGLEC9Q9Y336 463 aa9.47□□□□□ -0.89
COMMD9-208ENST00000533643 JMJD1CQ15652 2540 aa9.47□□□□□ -0.89
COMMD9-208ENST00000533643 A0A0B4J293 547 aa9.46□□□□□ -0.9
COMMD9-208ENST00000533643 FAM181BA6NEQ2 426 aa9.46□□□□□ -0.9
COMMD9-208ENST00000533643 SH2D7A6NKC9 451 aaPredicted RBP9.46□□□□□ -0.9
COMMD9-208ENST00000533643 MARCH11A6NNE9 402 aa9.46□□□□□ -0.9
COMMD9-208ENST00000533643 M0QZK8 103 aa9.46□□□□□ -0.9
COMMD9-208ENST00000533643 PRAF2O60831 178 aa9.46□□□□□ -0.9
COMMD9-208ENST00000533643 IL6RP08887 468 aaPredicted RBP9.46□□□□□ -0.9
COMMD9-208ENST00000533643 P0C879 139 aa9.46□□□□□ -0.9
COMMD9-208ENST00000533643 ERVK-16P61578 105 aa9.46□□□□□ -0.9
COMMD9-208ENST00000533643 BLCAPP62952 87 aa9.46□□□□□ -0.9
COMMD9-208ENST00000533643 SRPXP78539 464 aa9.46□□□□□ -0.9
COMMD9-208ENST00000533643 PJVKQ0ZLH3 352 aa9.46□□□□□ -0.9
COMMD9-208ENST00000533643 OR4A47Q6IF82 309 aa9.46□□□□□ -0.9
COMMD9-208ENST00000533643 LIN54Q6MZP7 749 aa9.46□□□□□ -0.9
COMMD9-208ENST00000533643 LYZL2Q7Z4W2 148 aa9.46□□□□□ -0.9
COMMD9-208ENST00000533643 CADM3Q8N126 398 aa9.46□□□□□ -0.9
COMMD9-208ENST00000533643 MINDY2Q8NBR6 621 aa9.46□□□□□ -0.9
COMMD9-208ENST00000533643 DMBX1Q8NFW5 382 aa9.46□□□□□ -0.9
COMMD9-208ENST00000533643 MITD1Q8WV92 249 aa9.46□□□□□ -0.9
COMMD9-208ENST00000533643 RASL11BQ9BPW5 248 aa9.46□□□□□ -0.9
COMMD9-208ENST00000533643 TMEM140Q9NV12 185 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms