RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 DIRAS3O95661 229 aa8.66□□□□□ -1.02
CMTM1-216ENST00000533078 QRFPP83859 136 aa8.66□□□□□ -1.02
CMTM1-216ENST00000533078 ZNF45Q02386 682 aa8.66□□□□□ -1.02
CMTM1-216ENST00000533078 CDK10Q15131 360 aa8.66□□□□□ -1.02
CMTM1-216ENST00000533078 P2RY14Q15391 338 aa8.66□□□□□ -1.02
CMTM1-216ENST00000533078 MED22Q15528 200 aa8.66□□□□□ -1.02
CMTM1-216ENST00000533078 RAB11BQ15907 218 aa8.66□□□□□ -1.02
CMTM1-216ENST00000533078 Q6ZWC4 215 aa8.66□□□□□ -1.02
CMTM1-216ENST00000533078 LYG2Q86SG7 212 aa8.66□□□□□ -1.02
CMTM1-216ENST00000533078 TMEM61Q8N0U2 210 aa8.66□□□□□ -1.02
CMTM1-216ENST00000533078 FAM89BQ8N5H3 189 aa8.66□□□□□ -1.02
CMTM1-216ENST00000533078 OR1L6Q8NGR2 347 aa8.66□□□□□ -1.02
CMTM1-216ENST00000533078 VSTM2AQ8TAG5 236 aa8.66□□□□□ -1.02
CMTM1-216ENST00000533078 EEF1AKMT3Q96AZ1 226 aa8.66□□□□□ -1.02
CMTM1-216ENST00000533078 MND1Q9BWT6 205 aa8.66□□□□□ -1.02
CMTM1-216ENST00000533078 PECRQ9BY49 303 aa8.66□□□□□ -1.02
CMTM1-216ENST00000533078 ZNF430Q9H8G1 570 aaPredicted RBP8.66□□□□□ -1.02
CMTM1-216ENST00000533078 S100A14Q9HCY8 104 aa8.66□□□□□ -1.02
CMTM1-216ENST00000533078 FBXL7Q9UJT9 491 aa8.66□□□□□ -1.02
CMTM1-216ENST00000533078 PRELID3BQ9Y3B1 194 aa8.66□□□□□ -1.02
CMTM1-216ENST00000533078 TRAV25A0A0B4J276 109 aa8.65□□□□□ -1.02
CMTM1-216ENST00000533078 SLC17A2O00624 439 aa8.65□□□□□ -1.02
CMTM1-216ENST00000533078 HLA-AP01891 365 aaKnown RBP8.65□□□□□ -1.02
CMTM1-216ENST00000533078 SAA1P0DJI8 122 aaPredicted RBP8.65□□□□□ -1.02
CMTM1-216ENST00000533078 ATF4P18848 351 aaPredicted RBP8.65□□□□□ -1.02
CMTM1-216ENST00000533078 TALDO1P37837 337 aa8.65□□□□□ -1.02
CMTM1-216ENST00000533078 INSL4Q14641 139 aa8.65□□□□□ -1.02
CMTM1-216ENST00000533078 TM4SF20Q53R12 229 aa8.65□□□□□ -1.02
CMTM1-216ENST00000533078 WFDC3Q8IUB2 231 aa8.65□□□□□ -1.02
CMTM1-216ENST00000533078 C8orf59Q8N0T1 100 aaPredicted RBP8.65□□□□□ -1.02
CMTM1-216ENST00000533078 DHRSXQ8N5I4 330 aa8.65□□□□□ -1.02
CMTM1-216ENST00000533078 NANOGP1Q8N7R0 232 aa8.65□□□□□ -1.02
CMTM1-216ENST00000533078 UXS1Q8NBZ7 420 aa8.65□□□□□ -1.02
CMTM1-216ENST00000533078 CACNG8Q8WXS5 425 aa8.65□□□□□ -1.02
CMTM1-216ENST00000533078 MARC2Q969Z3 335 aa8.65□□□□□ -1.02
CMTM1-216ENST00000533078 CABLES2Q9BTV7 478 aa8.65□□□□□ -1.02
CMTM1-216ENST00000533078 C8orf4Q9NR00 106 aa8.65□□□□□ -1.02
CMTM1-216ENST00000533078 TRBV6-7A0A0A0MS04 114 aa8.64□□□□□ -1.03
CMTM1-216ENST00000533078 A8MWP6 167 aa8.64□□□□□ -1.03
CMTM1-216ENST00000533078 DENRO43583 198 aaKnown RBP8.64□□□□□ -1.03
CMTM1-216ENST00000533078 ARL6IP5O75915 188 aa8.64□□□□□ -1.03
CMTM1-216ENST00000533078 CDK1P06493 297 aa8.64□□□□□ -1.03
CMTM1-216ENST00000533078 DEFA4P12838 97 aa8.64□□□□□ -1.03
CMTM1-216ENST00000533078 HIST1H1BP16401 226 aaKnown RBP8.64□□□□□ -1.03
CMTM1-216ENST00000533078 CD36P16671 472 aa8.64□□□□□ -1.03
CMTM1-216ENST00000533078 GADD45AP24522 165 aa8.64□□□□□ -1.03
CMTM1-216ENST00000533078 DUTP33316 252 aaKnown RBP8.64□□□□□ -1.03
CMTM1-216ENST00000533078 TMEM50BP56557 158 aa8.64□□□□□ -1.03
CMTM1-216ENST00000533078 DEFB135Q30KP9 77 aa8.64□□□□□ -1.03
CMTM1-216ENST00000533078 IGSF11Q5DX21 431 aa8.64□□□□□ -1.03
CMTM1-216ENST00000533078 BTNL8Q6UX41 500 aa8.64□□□□□ -1.03
CMTM1-216ENST00000533078 CLEC19AQ6UXS0 136 aa8.64□□□□□ -1.03
CMTM1-216ENST00000533078 RPP25LQ8N5L8 163 aaKnown RBP8.64□□□□□ -1.03
CMTM1-216ENST00000533078 OR2C3Q8N628 320 aa8.64□□□□□ -1.03
CMTM1-216ENST00000533078 STPG3Q8N7X2 389 aa8.64□□□□□ -1.03
CMTM1-216ENST00000533078 BPIFB6Q8NFQ5 453 aa8.64□□□□□ -1.03
CMTM1-216ENST00000533078 RAB3CQ96E17 227 aa8.64□□□□□ -1.03
CMTM1-216ENST00000533078 C6orf62Q9GZU0 229 aaPredicted RBP8.64□□□□□ -1.03
CMTM1-216ENST00000533078 MLXQ9UH92 298 aa8.64□□□□□ -1.03
CMTM1-216ENST00000533078 PSORS1C1Q9UIG5 152 aa8.64□□□□□ -1.03
CMTM1-216ENST00000533078 DNAH6Q9C0G6 4158 aa8.63□□□□□ -1.03
CMTM1-216ENST00000533078 TMEM213A2RRL7 107 aa8.63□□□□□ -1.03
CMTM1-216ENST00000533078 NPIPB5A8MRT5 1133 aa8.63□□□□□ -1.03
CMTM1-216ENST00000533078 FCGR3BO75015 233 aa8.63□□□□□ -1.03
CMTM1-216ENST00000533078 SLC22A5O76082 557 aa8.63□□□□□ -1.03
CMTM1-216ENST00000533078 FCGR3AP08637 254 aa8.63□□□□□ -1.03
CMTM1-216ENST00000533078 UCHL1P09936 223 aa8.63□□□□□ -1.03
CMTM1-216ENST00000533078 MYOD1P15172 320 aa8.63□□□□□ -1.03
CMTM1-216ENST00000533078 EDN2P20800 178 aa8.63□□□□□ -1.03
CMTM1-216ENST00000533078 RPL27AP46776 148 aaKnown RBP8.63□□□□□ -1.03
CMTM1-216ENST00000533078 PSMD7P51665 324 aa8.63□□□□□ -1.03
CMTM1-216ENST00000533078 SSX1Q16384 188 aa8.63□□□□□ -1.03
CMTM1-216ENST00000533078 LGALS9CQ6DKI2 356 aa8.63□□□□□ -1.03
CMTM1-216ENST00000533078 LAMTOR1Q6IAA8 161 aa8.63□□□□□ -1.03
CMTM1-216ENST00000533078 KCTD9Q7L273 389 aa8.63□□□□□ -1.03
CMTM1-216ENST00000533078 UFD1Q92890 307 aa8.63□□□□□ -1.03
CMTM1-216ENST00000533078 CXorf58Q96LI9 332 aa8.63□□□□□ -1.03
CMTM1-216ENST00000533078 FYTTD1Q96QD9 318 aaKnown RBP8.63□□□□□ -1.03
CMTM1-216ENST00000533078 UFC1Q9Y3C8 167 aa8.63□□□□□ -1.03
CMTM1-216ENST00000533078 SELENOKQ9Y6D0 94 aa8.63□□□□□ -1.03
CMTM1-216ENST00000533078 VPS13DQ5THJ4 4388 aa8.63□□□□□ -1.03
CMTM1-216ENST00000533078 TRBV7-1A0A0A6YYK4 115 aa8.62□□□□□ -1.03
CMTM1-216ENST00000533078 KIR2DL5BA0A0G2JN68 375 aa8.62□□□□□ -1.03
CMTM1-216ENST00000533078 KIR2DL5BA0A0G2JPC4 375 aa8.62□□□□□ -1.03
CMTM1-216ENST00000533078 HMX3A6NHT5 357 aa8.62□□□□□ -1.03
CMTM1-216ENST00000533078 FOXI3A8MTJ6 420 aaPredicted RBP8.62□□□□□ -1.03
CMTM1-216ENST00000533078 CYB5BO43169 146 aa8.62□□□□□ -1.03
CMTM1-216ENST00000533078 IGHV3-23P01764 117 aa8.62□□□□□ -1.03
CMTM1-216ENST00000533078 MAS1LP35410 378 aa8.62□□□□□ -1.03
CMTM1-216ENST00000533078 ARFRP1Q13795 201 aa8.62□□□□□ -1.03
CMTM1-216ENST00000533078 SPHARQ15513 63 aa8.62□□□□□ -1.03
CMTM1-216ENST00000533078 TRAM1Q15629 374 aa8.62□□□□□ -1.03
CMTM1-216ENST00000533078 MRGPRG-AS1Q2M3A8 158 aa8.62□□□□□ -1.03
CMTM1-216ENST00000533078 C10orf55Q5SWW7 151 aa8.62□□□□□ -1.03
CMTM1-216ENST00000533078 KIR2DL5AQ8N109 375 aa8.62□□□□□ -1.03
CMTM1-216ENST00000533078 PACRGLQ8N7B6 248 aa8.62□□□□□ -1.03
CMTM1-216ENST00000533078 ZNF645Q8N7E2 425 aa8.62□□□□□ -1.03
CMTM1-216ENST00000533078 OR4S2Q8NH73 311 aa8.62□□□□□ -1.03
CMTM1-216ENST00000533078 KIR2DL5BQ8NHK3 375 aa8.62□□□□□ -1.03
CMTM1-216ENST00000533078 PHLDA1Q8WV24 401 aaPredicted RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms