RNA–Protein interactions for RNA: ENST00000533048.5

NXF1-214, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-214ENST00000533048 Q8N6K4 173 aa11.87□□□□□ -0.51
NXF1-214ENST00000533048 RHOVQ96L33 236 aa11.87□□□□□ -0.51
NXF1-214ENST00000533048 HARBI1Q96MB7 349 aa11.87□□□□□ -0.51
NXF1-214ENST00000533048 ZNF436Q9C0F3 470 aaPredicted RBP11.87□□□□□ -0.51
NXF1-214ENST00000533048 MS4A7Q9GZW8 240 aaPredicted RBP11.87□□□□□ -0.51
NXF1-214ENST00000533048 COA4Q9NYJ1 87 aa11.87□□□□□ -0.51
NXF1-214ENST00000533048 SVEP1Q4LDE5 3571 aa11.87□□□□□ -0.51
NXF1-214ENST00000533048 SRRM4A7MD48 611 aaKnown RBP11.86□□□□□ -0.51
NXF1-214ENST00000533048 MPTX1A8MV57 137 aa11.86□□□□□ -0.51
NXF1-214ENST00000533048 CCSO14618 274 aa11.86□□□□□ -0.51
NXF1-214ENST00000533048 SPDEFO95238 335 aa11.86□□□□□ -0.51
NXF1-214ENST00000533048 KRASP01116 189 aa11.86□□□□□ -0.51
NXF1-214ENST00000533048 IGLV2-23P01705 113 aa11.86□□□□□ -0.51
NXF1-214ENST00000533048 FGF2P09038 288 aa11.86□□□□□ -0.51
NXF1-214ENST00000533048 GIPP09681 153 aaPredicted RBP11.86□□□□□ -0.51
NXF1-214ENST00000533048 G6PCP35575 357 aa11.86□□□□□ -0.51
NXF1-214ENST00000533048 ERVK-16P61578 105 aa11.86□□□□□ -0.51
NXF1-214ENST00000533048 IL15RAQ13261 267 aa11.86□□□□□ -0.51
NXF1-214ENST00000533048 AARDQ4LEZ3 155 aa11.86□□□□□ -0.51
NXF1-214ENST00000533048 GSG1LQ6UXU4 331 aa11.86□□□□□ -0.51
NXF1-214ENST00000533048 PUSL1Q8N0Z8 303 aaKnown RBP11.86□□□□□ -0.51
NXF1-214ENST00000533048 RRNAD1Q96FB5 475 aaKnown RBP11.86□□□□□ -0.51
NXF1-214ENST00000533048 OR10C1Q96KK4 312 aa11.86□□□□□ -0.51
NXF1-214ENST00000533048 SPIN2AQ99865 258 aa11.86□□□□□ -0.51
NXF1-214ENST00000533048 SPIN2BQ9BPZ2 258 aa11.86□□□□□ -0.51
NXF1-214ENST00000533048 PRDM13Q9H4Q3 707 aa11.86□□□□□ -0.51
NXF1-214ENST00000533048 FAM96BQ9Y3D0 163 aa11.86□□□□□ -0.51
NXF1-214ENST00000533048 A0A1B0GU03 582 aa11.85□□□□□ -0.51
NXF1-214ENST00000533048 SHOXO15266 292 aa11.85□□□□□ -0.51
NXF1-214ENST00000533048 PITX3O75364 302 aa11.85□□□□□ -0.51
NXF1-214ENST00000533048 MOSP00540 346 aa11.85□□□□□ -0.51
NXF1-214ENST00000533048 IGKV1D-33P01593 117 aa11.85□□□□□ -0.51
NXF1-214ENST00000533048 IGKV1-33P01594 117 aa11.85□□□□□ -0.51
NXF1-214ENST00000533048 SNRNP70P08621 437 aaKnown RBP11.85□□□□□ -0.51
NXF1-214ENST00000533048 CD99P14209 185 aa11.85□□□□□ -0.51
NXF1-214ENST00000533048 PAX6P26367 422 aa11.85□□□□□ -0.51
NXF1-214ENST00000533048 UBE2KP61086 200 aa11.85□□□□□ -0.51
NXF1-214ENST00000533048 AKAP14Q86UN6 197 aa11.85□□□□□ -0.51
NXF1-214ENST00000533048 OR2T10Q8NGZ9 312 aa11.85□□□□□ -0.51
NXF1-214ENST00000533048 GPR146Q96CH1 333 aa11.85□□□□□ -0.51
NXF1-214ENST00000533048 EAF1Q96JC9 268 aaPredicted RBP11.85□□□□□ -0.51
NXF1-214ENST00000533048 ST6GAL2Q96JF0 529 aa11.85□□□□□ -0.51
NXF1-214ENST00000533048 C2orf50Q96LR7 162 aa11.85□□□□□ -0.51
NXF1-214ENST00000533048 TSNAXQ99598 290 aaKnown RBP11.85□□□□□ -0.51
NXF1-214ENST00000533048 NEURL2Q9BR09 285 aa11.85□□□□□ -0.51
NXF1-214ENST00000533048 NMES1Q9C002 83 aa11.85□□□□□ -0.51
NXF1-214ENST00000533048 TMEM140Q9NV12 185 aa11.85□□□□□ -0.51
NXF1-214ENST00000533048 BET1LQ9NYM9 111 aa11.85□□□□□ -0.51
NXF1-214ENST00000533048 SONP18583 2426 aaKnown RBP11.85□□□□□ -0.51
NXF1-214ENST00000533048 NDUFA3O95167 84 aa11.84□□□□□ -0.51
NXF1-214ENST00000533048 SIX6O95475 246 aa11.84□□□□□ -0.51
NXF1-214ENST00000533048 FAM106CPP0CH98 169 aa11.84□□□□□ -0.51
NXF1-214ENST00000533048 SAA1P0DJI8 122 aaPredicted RBP11.84□□□□□ -0.51
NXF1-214ENST00000533048 RAP2BP61225 183 aa11.84□□□□□ -0.51
NXF1-214ENST00000533048 RPS16P62249 146 aaKnown RBP11.84□□□□□ -0.51
NXF1-214ENST00000533048 CYCSP99999 105 aaKnown RBP11.84□□□□□ -0.51
NXF1-214ENST00000533048 SMCO1Q147U7 214 aa11.84□□□□□ -0.51
NXF1-214ENST00000533048 IAH1Q2TAA2 248 aaPredicted RBP11.84□□□□□ -0.51
NXF1-214ENST00000533048 LRRC75BQ2VPJ9 315 aa11.84□□□□□ -0.51
NXF1-214ENST00000533048 FBLN7Q53RD9 439 aa11.84□□□□□ -0.51
NXF1-214ENST00000533048 OR4A47Q6IF82 309 aa11.84□□□□□ -0.51
NXF1-214ENST00000533048 Q6ZRM9 215 aa11.84□□□□□ -0.51
NXF1-214ENST00000533048 H2BFWTQ7Z2G1 175 aa11.84□□□□□ -0.51
NXF1-214ENST00000533048 FOXRED2Q8IWF2 684 aa11.84□□□□□ -0.51
NXF1-214ENST00000533048 DMBX1Q8NFW5 382 aa11.84□□□□□ -0.51
NXF1-214ENST00000533048 NPBQ8NG41 125 aa11.84□□□□□ -0.51
NXF1-214ENST00000533048 OR8H1Q8NGG4 311 aa11.84□□□□□ -0.51
NXF1-214ENST00000533048 OR4A5Q8NH83 315 aa11.84□□□□□ -0.51
NXF1-214ENST00000533048 VSTM2AQ8TAG5 236 aa11.84□□□□□ -0.51
NXF1-214ENST00000533048 PIFOQ8TCI5 191 aa11.84□□□□□ -0.51
NXF1-214ENST00000533048 RBMXL1Q96E39 390 aaKnown RBP11.84□□□□□ -0.51
NXF1-214ENST00000533048 RITA1Q96K30 269 aa11.84□□□□□ -0.51
NXF1-214ENST00000533048 YAE1D1Q9NRH1 226 aa11.84□□□□□ -0.51
NXF1-214ENST00000533048 SOX21Q9Y651 276 aaPredicted RBP11.84□□□□□ -0.51
NXF1-214ENST00000533048 C5orf51A6NDU8 294 aa11.83□□□□□ -0.52
NXF1-214ENST00000533048 CYSRT1A8MQ03 144 aa11.83□□□□□ -0.52
NXF1-214ENST00000533048 CCNKO75909 580 aa11.83□□□□□ -0.52
NXF1-214ENST00000533048 KBTBD11O94819 623 aa11.83□□□□□ -0.52
NXF1-214ENST00000533048 LY6G6DO95868 133 aa11.83□□□□□ -0.52
NXF1-214ENST00000533048 CRYGBP07316 175 aa11.83□□□□□ -0.52
NXF1-214ENST00000533048 HNF1AP20823 631 aa11.83□□□□□ -0.52
NXF1-214ENST00000533048 VMA21Q3ZAQ7 101 aa11.83□□□□□ -0.52
NXF1-214ENST00000533048 TCTE3Q8IZS6 198 aa11.83□□□□□ -0.52
NXF1-214ENST00000533048 VKORC1L1Q8N0U8 176 aa11.83□□□□□ -0.52
NXF1-214ENST00000533048 BCL6BQ8N143 479 aaPredicted RBP11.83□□□□□ -0.52
NXF1-214ENST00000533048 TEX45Q8NA69 505 aa11.83□□□□□ -0.52
NXF1-214ENST00000533048 ZBTB8BQ8NAP8 495 aaPredicted RBP11.83□□□□□ -0.52
NXF1-214ENST00000533048 OR4D5Q8NGN0 318 aa11.83□□□□□ -0.52
NXF1-214ENST00000533048 RNASE11Q8TAA1 199 aaKnown RBP11.83□□□□□ -0.52
NXF1-214ENST00000533048 TMEM167AQ8TBQ9 72 aa11.83□□□□□ -0.52
NXF1-214ENST00000533048 RANBP3Q9H6Z4 567 aaPredicted RBP11.83□□□□□ -0.52
NXF1-214ENST00000533048 PLSCR3Q9NRY6 295 aa11.83□□□□□ -0.52
NXF1-214ENST00000533048 CACNG5Q9UF02 275 aa11.83□□□□□ -0.52
NXF1-214ENST00000533048 HIVEP1P15822 2718 aa11.83□□□□□ -0.52
NXF1-214ENST00000533048 TNCP24821 2201 aa11.83□□□□□ -0.52
NXF1-214ENST00000533048 C13orf42A0A1B0GVH6 325 aa11.82□□□□□ -0.52
NXF1-214ENST00000533048 FAM25EA8MYX2 175 aa11.82□□□□□ -0.52
NXF1-214ENST00000533048 OR9G9P0C7N8 305 aa11.82□□□□□ -0.52
NXF1-214ENST00000533048 CD83Q01151 205 aa11.82□□□□□ -0.52
NXF1-214ENST00000533048 RELBQ01201 579 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms