RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 DUTP33316 252 aaKnown RBP12.35□□□□□ -0.43
SSH3-210ENST00000532881 SMIM21Q3B7S5 101 aa12.35□□□□□ -0.43
SSH3-210ENST00000532881 GCSAMQ8N6F7 178 aa12.35□□□□□ -0.43
SSH3-210ENST00000532881 OR4X1Q8NH49 305 aa12.35□□□□□ -0.43
SSH3-210ENST00000532881 ZNF71Q9NQZ8 489 aaPredicted RBP12.35□□□□□ -0.43
SSH3-210ENST00000532881 ZFHX2Q9C0A1 2572 aaPredicted RBP12.35□□□□□ -0.43
SSH3-210ENST00000532881 PCNX1Q96RV3 2341 aa12.35□□□□□ -0.43
SSH3-210ENST00000532881 A0A1W2PPQ1 181 aa12.34□□□□□ -0.43
SSH3-210ENST00000532881 J3QW42 95 aa12.34□□□□□ -0.43
SSH3-210ENST00000532881 IFNA10P01566 189 aa12.34□□□□□ -0.43
SSH3-210ENST00000532881 CHRNA7P36544 502 aa12.34□□□□□ -0.43
SSH3-210ENST00000532881 PSMB3P49720 205 aa12.34□□□□□ -0.43
SSH3-210ENST00000532881 RND2P52198 227 aa12.34□□□□□ -0.43
SSH3-210ENST00000532881 FAM3BP58499 235 aaPredicted RBP12.34□□□□□ -0.43
SSH3-210ENST00000532881 BSXQ3C1V8 233 aa12.34□□□□□ -0.43
SSH3-210ENST00000532881 ACSF3Q4G176 576 aaPredicted RBP12.34□□□□□ -0.43
SSH3-210ENST00000532881 MORN2Q502X0 79 aa12.34□□□□□ -0.43
SSH3-210ENST00000532881 RHOVQ96L33 236 aa12.34□□□□□ -0.43
SSH3-210ENST00000532881 WFIKKN1Q96NZ8 548 aa12.34□□□□□ -0.43
SSH3-210ENST00000532881 OR2V2Q96R30 315 aa12.34□□□□□ -0.43
SSH3-210ENST00000532881 OR6C3Q9NZP0 311 aa12.34□□□□□ -0.43
SSH3-210ENST00000532881 CTXND1A0A1B0GTU2 59 aa12.34□□□□□ -0.43
SSH3-210ENST00000532881 RAB29O14966 203 aa12.34□□□□□ -0.43
SSH3-210ENST00000532881 FTH1P19P0C7X4 201 aa12.34□□□□□ -0.43
SSH3-210ENST00000532881 P2RY6Q15077 328 aa12.34□□□□□ -0.43
SSH3-210ENST00000532881 FAM122AQ96E09 287 aa12.34□□□□□ -0.43
SSH3-210ENST00000532881 P2RX4Q99571 388 aa12.34□□□□□ -0.43
SSH3-210ENST00000532881 PARD6AQ9NPB6 346 aa12.34□□□□□ -0.43
SSH3-210ENST00000532881 DCAF16Q9NXF7 216 aa12.34□□□□□ -0.43
SSH3-210ENST00000532881 NAT8Q9UHE5 227 aa12.34□□□□□ -0.43
SSH3-210ENST00000532881 B4DEV8 164 aa12.33□□□□□ -0.43
SSH3-210ENST00000532881 SPINT2O43291 252 aa12.33□□□□□ -0.43
SSH3-210ENST00000532881 HOXB1P14653 301 aaPredicted RBP12.33□□□□□ -0.43
SSH3-210ENST00000532881 PNRC1Q12796 327 aaPredicted RBP12.33□□□□□ -0.43
SSH3-210ENST00000532881 PRAMEF5Q5TYX0 476 aa12.33□□□□□ -0.43
SSH3-210ENST00000532881 CST9LP1Q5W188 147 aa12.33□□□□□ -0.43
SSH3-210ENST00000532881 UNQ6494/PRO21346Q6UXR6 183 aa12.33□□□□□ -0.43
SSH3-210ENST00000532881 ZNF709Q8N972 641 aa12.33□□□□□ -0.43
SSH3-210ENST00000532881 ZNF114Q8NC26 417 aa12.33□□□□□ -0.43
SSH3-210ENST00000532881 TMEM170AQ8WVE7 144 aa12.33□□□□□ -0.43
SSH3-210ENST00000532881 SSMEM1Q8WWF3 244 aa12.33□□□□□ -0.43
SSH3-210ENST00000532881 TNCP24821 2201 aa12.33□□□□□ -0.43
SSH3-210ENST00000532881 SVEP1Q4LDE5 3571 aa12.33□□□□□ -0.44
SSH3-210ENST00000532881 SEC14L6B5MCN3 397 aa12.33□□□□□ -0.44
SSH3-210ENST00000532881 KBTBD11O94819 623 aa12.33□□□□□ -0.44
SSH3-210ENST00000532881 IFNA1P01562 189 aa12.33□□□□□ -0.44
SSH3-210ENST00000532881 KITLGP21583 273 aa12.33□□□□□ -0.44
SSH3-210ENST00000532881 ZBTB34Q8NCN2 500 aa12.33□□□□□ -0.44
SSH3-210ENST00000532881 PRO1933Q9H354 126 aa12.33□□□□□ -0.44
SSH3-210ENST00000532881 PFN1P07737 140 aaKnown RBP12.32□□□□□ -0.44
SSH3-210ENST00000532881 CD1BP29016 333 aa12.32□□□□□ -0.44
SSH3-210ENST00000532881 MIC13Q5XKP0 118 aa12.32□□□□□ -0.44
SSH3-210ENST00000532881 BHLHA15Q7RTS1 189 aaPredicted RBP12.32□□□□□ -0.44
SSH3-210ENST00000532881 S100PBPQ96BU1 408 aa12.32□□□□□ -0.44
SSH3-210ENST00000532881 ACTR3CQ9C0K3 210 aaPredicted RBP12.32□□□□□ -0.44
SSH3-210ENST00000532881 ASCL3Q9NQ33 180 aa12.32□□□□□ -0.44
SSH3-210ENST00000532881 HEYLQ9NQ87 328 aaPredicted RBP12.32□□□□□ -0.44
SSH3-210ENST00000532881 PRR33A8MZF0 331 aa12.32□□□□□ -0.44
SSH3-210ENST00000532881 C11orf94C9JXX5 98 aa12.32□□□□□ -0.44
SSH3-210ENST00000532881 K7EM74 188 aa12.32□□□□□ -0.44
SSH3-210ENST00000532881 GYPAP02724 150 aa12.32□□□□□ -0.44
SSH3-210ENST00000532881 GALR1P47211 349 aa12.32□□□□□ -0.44
SSH3-210ENST00000532881 CDC34P49427 236 aaPredicted RBP12.32□□□□□ -0.44
SSH3-210ENST00000532881 GAMTQ14353 236 aa12.32□□□□□ -0.44
SSH3-210ENST00000532881 CYP2G1PQ6ZSU1 146 aa12.32□□□□□ -0.44
SSH3-210ENST00000532881 CENPVQ7Z7K6 275 aaPredicted RBP12.32□□□□□ -0.44
SSH3-210ENST00000532881 PRR7Q8TB68 274 aa12.32□□□□□ -0.44
SSH3-210ENST00000532881 TMEM37Q8WXS4 190 aa12.32□□□□□ -0.44
SSH3-210ENST00000532881 LOXL4Q96JB6 756 aa12.32□□□□□ -0.44
SSH3-210ENST00000532881 LURAP1Q96LR2 239 aa12.32□□□□□ -0.44
SSH3-210ENST00000532881 PLSCR4Q9NRQ2 329 aa12.32□□□□□ -0.44
SSH3-210ENST00000532881 PROCRQ9UNN8 238 aa12.32□□□□□ -0.44
SSH3-210ENST00000532881 AQP7O14520 342 aa12.31□□□□□ -0.44
SSH3-210ENST00000532881 IGLV1-44P01699 117 aa12.31□□□□□ -0.44
SSH3-210ENST00000532881 CD82P27701 267 aa12.31□□□□□ -0.44
SSH3-210ENST00000532881 LOXL3P58215 753 aa12.31□□□□□ -0.44
SSH3-210ENST00000532881 ZCCHC24Q8N2G6 241 aaKnown RBP12.31□□□□□ -0.44
SSH3-210ENST00000532881 ITLN1Q8WWA0 313 aa12.31□□□□□ -0.44
SSH3-210ENST00000532881 HINT2Q9BX68 163 aa12.31□□□□□ -0.44
SSH3-210ENST00000532881 PIGBOS1A0A0B4J2F0 54 aa12.31□□□□□ -0.44
SSH3-210ENST00000532881 A0A1B0GUS0 222 aa12.31□□□□□ -0.44
SSH3-210ENST00000532881 NDUFB4O95168 129 aa12.31□□□□□ -0.44
SSH3-210ENST00000532881 CGAP01215 116 aa12.31□□□□□ -0.44
SSH3-210ENST00000532881 GNG10P50151 68 aa12.31□□□□□ -0.44
SSH3-210ENST00000532881 ZNF474Q6S9Z5 364 aaPredicted RBP12.31□□□□□ -0.44
SSH3-210ENST00000532881 OR10A7Q8NGE5 316 aa12.31□□□□□ -0.44
SSH3-210ENST00000532881 OR4A16Q8NH70 328 aa12.31□□□□□ -0.44
SSH3-210ENST00000532881 HSD17B10Q99714 261 aaKnown RBP12.31□□□□□ -0.44
SSH3-210ENST00000532881 PARD6GQ9BYG4 376 aaPredicted RBP12.31□□□□□ -0.44
SSH3-210ENST00000532881 MS4A5Q9H3V2 200 aa12.31□□□□□ -0.44
SSH3-210ENST00000532881 TIMM9Q9Y5J7 89 aa12.31□□□□□ -0.44
SSH3-210ENST00000532881 ZNF292O60281 2723 aa12.31□□□□□ -0.44
SSH3-210ENST00000532881 ANKRD11Q6UB99 2663 aaPredicted RBP12.31□□□□□ -0.44
SSH3-210ENST00000532881 H7BYZ3 331 aa12.3□□□□□ -0.44
SSH3-210ENST00000532881 MMP23AO75900 390 aa12.3□□□□□ -0.44
SSH3-210ENST00000532881 C1QTNF9P0C862 333 aa12.3□□□□□ -0.44
SSH3-210ENST00000532881 GNB1P62873 340 aa12.3□□□□□ -0.44
SSH3-210ENST00000532881 SPATA31B1PQ5VZV4 182 aa12.3□□□□□ -0.44
SSH3-210ENST00000532881 TREML4Q6UXN2 200 aa12.3□□□□□ -0.44
SSH3-210ENST00000532881 OR13D1Q8NGV5 346 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms