RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 C18orf65Q6ZTR6 163 aa15.53■□□□□ 0.08
CPSF1-209ENST00000532725 TMEM229BQ8NBD8 167 aa15.53■□□□□ 0.08
CPSF1-209ENST00000532725 OR4S2Q8NH73 311 aa15.53■□□□□ 0.08
CPSF1-209ENST00000532725 BORCS5Q969J3 196 aa15.53■□□□□ 0.08
CPSF1-209ENST00000532725 FAM103A1Q9BTL3 118 aaKnown RBP15.53■□□□□ 0.08
CPSF1-209ENST00000532725 TINAGL1Q9GZM7 467 aaPredicted RBP15.53■□□□□ 0.08
CPSF1-209ENST00000532725 FXYD6Q9H0Q3 95 aa15.53■□□□□ 0.08
CPSF1-209ENST00000532725 A3GALT2U3KPV4 340 aa15.53■□□□□ 0.08
CPSF1-209ENST00000532725 RAMP3O60896 148 aa15.52■□□□□ 0.08
CPSF1-209ENST00000532725 PGLYRP1O75594 196 aaPredicted RBP15.52■□□□□ 0.08
CPSF1-209ENST00000532725 CD74P04233 296 aa15.52■□□□□ 0.08
CPSF1-209ENST00000532725 TBPP20226 339 aa15.52■□□□□ 0.08
CPSF1-209ENST00000532725 KIR2DS2P43631 304 aa15.52■□□□□ 0.08
CPSF1-209ENST00000532725 KIAA0141Q14154 515 aaPredicted RBP15.52■□□□□ 0.08
CPSF1-209ENST00000532725 PRSS8Q16651 343 aa15.52■□□□□ 0.08
CPSF1-209ENST00000532725 AADACL3Q5VUY0 350 aa15.52■□□□□ 0.08
CPSF1-209ENST00000532725 IDO2Q6ZQW0 420 aa15.52■□□□□ 0.08
CPSF1-209ENST00000532725 SMIM4Q8WVI0 70 aa15.52■□□□□ 0.08
CPSF1-209ENST00000532725 KLK15Q9H2R5 256 aa15.52■□□□□ 0.08
CPSF1-209ENST00000532725 NOTCH3Q9UM47 2321 aa15.51■□□□□ 0.07
CPSF1-209ENST00000532725 FABP12A6NFH5 140 aa15.51■□□□□ 0.07
CPSF1-209ENST00000532725 RBFOX2O43251 390 aaKnown RBP eCLIP15.51■□□□□ 0.07
CPSF1-209ENST00000532725 SOX15O60248 233 aa15.51■□□□□ 0.07
CPSF1-209ENST00000532725 CNIH1O95406 144 aa15.51■□□□□ 0.07
CPSF1-209ENST00000532725 SAA1P0DJI8 122 aaPredicted RBP15.51■□□□□ 0.07
CPSF1-209ENST00000532725 UCP3P55916 312 aa15.51■□□□□ 0.07
CPSF1-209ENST00000532725 CATR1Q13166 79 aa15.51■□□□□ 0.07
CPSF1-209ENST00000532725 ECSCRQ19T08 205 aa15.51■□□□□ 0.07
CPSF1-209ENST00000532725 RNASE10Q5GAN6 216 aaKnown RBP15.51■□□□□ 0.07
CPSF1-209ENST00000532725 LPCAT3Q6P1A2 487 aa15.51■□□□□ 0.07
CPSF1-209ENST00000532725 VKORC1L1Q8N0U8 176 aa15.51■□□□□ 0.07
CPSF1-209ENST00000532725 SPAG16Q8N0X2 631 aa15.51■□□□□ 0.07
CPSF1-209ENST00000532725 LFNGQ8NES3 379 aa15.51■□□□□ 0.07
CPSF1-209ENST00000532725 OR4D10Q8NGI6 311 aa15.51■□□□□ 0.07
CPSF1-209ENST00000532725 MYOZ3Q8TDC0 251 aa15.51■□□□□ 0.07
CPSF1-209ENST00000532725 ARPC1AQ92747 370 aa15.51■□□□□ 0.07
CPSF1-209ENST00000532725 DGCR14Q96DF8 476 aaKnown RBP15.51■□□□□ 0.07
CPSF1-209ENST00000532725 GPR31O00270 319 aa15.5■□□□□ 0.07
CPSF1-209ENST00000532725 GSTZ1O43708 216 aaPredicted RBP15.5■□□□□ 0.07
CPSF1-209ENST00000532725 IFNA6P05013 189 aa15.5■□□□□ 0.07
CPSF1-209ENST00000532725 CDX1P47902 265 aaPredicted RBP15.5■□□□□ 0.07
CPSF1-209ENST00000532725 TAS2R19P59542 299 aa15.5■□□□□ 0.07
CPSF1-209ENST00000532725 GNB1P62873 340 aa15.5■□□□□ 0.07
CPSF1-209ENST00000532725 UNQ5815/PRO19632Q6UWF5 114 aa15.5■□□□□ 0.07
CPSF1-209ENST00000532725 LHFPL1Q86WI0 220 aa15.5■□□□□ 0.07
CPSF1-209ENST00000532725 TCTEX1D1Q8N7M0 179 aa15.5■□□□□ 0.07
CPSF1-209ENST00000532725 ABHD5Q8WTS1 349 aa15.5■□□□□ 0.07
CPSF1-209ENST00000532725 RSRP1Q9BUV0 290 aa15.5■□□□□ 0.07
CPSF1-209ENST00000532725 DPPA5A6NC42 116 aa15.49■□□□□ 0.07
CPSF1-209ENST00000532725 HRASP01112 189 aa15.49■□□□□ 0.07
CPSF1-209ENST00000532725 PF4V1P10720 104 aa15.49■□□□□ 0.07
CPSF1-209ENST00000532725 SLC6A1P30531 599 aa15.49■□□□□ 0.07
CPSF1-209ENST00000532725 RAB9AP51151 201 aa15.49■□□□□ 0.07
CPSF1-209ENST00000532725 STEAP1BQ6NZ63 245 aa15.49■□□□□ 0.07
CPSF1-209ENST00000532725 ZNF695Q8IW36 515 aa15.49■□□□□ 0.07
CPSF1-209ENST00000532725 CMTM1Q8IZ96 169 aa15.49■□□□□ 0.07
CPSF1-209ENST00000532725 PUSL1Q8N0Z8 303 aaKnown RBP15.49■□□□□ 0.07
CPSF1-209ENST00000532725 ARRDC1Q8N5I2 433 aa15.49■□□□□ 0.07
CPSF1-209ENST00000532725 WFDC9Q8NEX5 89 aa15.49■□□□□ 0.07
CPSF1-209ENST00000532725 OR51H1Q8NH63 302 aa15.49■□□□□ 0.07
CPSF1-209ENST00000532725 GRPEL2Q8TAA5 225 aa15.49■□□□□ 0.07
CPSF1-209ENST00000532725 CD300LFQ8TDQ1 290 aa15.49■□□□□ 0.07
CPSF1-209ENST00000532725 RHOVQ96L33 236 aa15.49■□□□□ 0.07
CPSF1-209ENST00000532725 ZNF430Q9H8G1 570 aaPredicted RBP15.49■□□□□ 0.07
CPSF1-209ENST00000532725 NDUFA13Q9P0J0 144 aa15.49■□□□□ 0.07
CPSF1-209ENST00000532725 FOXA2Q9Y261 457 aaPredicted RBP15.49■□□□□ 0.07
CPSF1-209ENST00000532725 NOTCH1P46531 2555 aa15.49■□□□□ 0.07
CPSF1-209ENST00000532725 A0A1W2PN81 502 aa15.48■□□□□ 0.07
CPSF1-209ENST00000532725 OR2A4O95047 310 aa15.48■□□□□ 0.07
CPSF1-209ENST00000532725 RAB3DO95716 219 aa15.48■□□□□ 0.07
CPSF1-209ENST00000532725 HPRT1P00492 218 aa15.48■□□□□ 0.07
CPSF1-209ENST00000532725 ZNF735P0CB33 412 aa15.48■□□□□ 0.07
CPSF1-209ENST00000532725 CHRNA7P36544 502 aa15.48■□□□□ 0.07
CPSF1-209ENST00000532725 TMEM65Q6PI78 240 aa15.48■□□□□ 0.07
CPSF1-209ENST00000532725 C8orf86Q6ZUL3 223 aa15.48■□□□□ 0.07
CPSF1-209ENST00000532725 ZNF491Q8N8L2 437 aa15.48■□□□□ 0.07
CPSF1-209ENST00000532725 OR2A7Q96R45 310 aa15.48■□□□□ 0.07
CPSF1-209ENST00000532725 MSGN1A6NI15 193 aa15.47■□□□□ 0.07
CPSF1-209ENST00000532725 RLN1P04808 185 aa15.47■□□□□ 0.07
CPSF1-209ENST00000532725 IL6RP08887 468 aaPredicted RBP15.47■□□□□ 0.07
CPSF1-209ENST00000532725 F2RP25116 425 aa15.47■□□□□ 0.07
CPSF1-209ENST00000532725 ASPHD1Q5U4P2 390 aa15.47■□□□□ 0.07
CPSF1-209ENST00000532725 FOXB2Q5VYV0 432 aa15.47■□□□□ 0.07
CPSF1-209ENST00000532725 ETV3LQ6ZN32 361 aa15.47■□□□□ 0.07
CPSF1-209ENST00000532725 MMD2Q8IY49 270 aa15.47■□□□□ 0.07
CPSF1-209ENST00000532725 SLC38A6Q8IZM9 456 aa15.47■□□□□ 0.07
CPSF1-209ENST00000532725 POC5Q8NA72 575 aa15.47■□□□□ 0.07
CPSF1-209ENST00000532725 KLHL30-AS1Q8NEE0 82 aa15.47■□□□□ 0.07
CPSF1-209ENST00000532725 OR5M8Q8NGP6 311 aa15.47■□□□□ 0.07
CPSF1-209ENST00000532725 TERB2Q8NHR7 220 aa15.47■□□□□ 0.07
CPSF1-209ENST00000532725 VSTM2AQ8TAG5 236 aa15.47■□□□□ 0.07
CPSF1-209ENST00000532725 TMEM167AQ8TBQ9 72 aa15.47■□□□□ 0.07
CPSF1-209ENST00000532725 UBE2E2Q96LR5 201 aa15.47■□□□□ 0.07
CPSF1-209ENST00000532725 TMEM68Q96MH6 324 aa15.47■□□□□ 0.07
CPSF1-209ENST00000532725 AIFM2Q9BRQ8 373 aa15.47■□□□□ 0.07
CPSF1-209ENST00000532725 PLEKHA2Q9HB19 425 aa15.47■□□□□ 0.07
CPSF1-209ENST00000532725 NUDT19A8MXV4 375 aa15.46■□□□□ 0.07
CPSF1-209ENST00000532725 KBTBD11O94819 623 aa15.46■□□□□ 0.07
CPSF1-209ENST00000532725 S100A5P33763 92 aa15.46■□□□□ 0.07
CPSF1-209ENST00000532725 TAS2R31P59538 309 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms