RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 FOXG1P55316 489 aaPredicted RBP12.96□□□□□ -0.33
PCDHA3-202ENST00000532566 ABHD12Q8N2K0 398 aa12.96□□□□□ -0.33
PCDHA3-202ENST00000532566 Q8WTZ3 238 aa12.96□□□□□ -0.33
PCDHA3-202ENST00000532566 PAXXQ9BUH6 204 aa12.96□□□□□ -0.33
PCDHA3-202ENST00000532566 TMUB1Q9BVT8 246 aa12.96□□□□□ -0.33
PCDHA3-202ENST00000532566 UBTD1Q9HAC8 227 aa12.96□□□□□ -0.33
PCDHA3-202ENST00000532566 S100A4P26447 101 aaKnown RBP12.96□□□□□ -0.33
PCDHA3-202ENST00000532566 GPR6P46095 362 aaPredicted RBP12.96□□□□□ -0.33
PCDHA3-202ENST00000532566 FAM27E3Q08E93 113 aa12.96□□□□□ -0.33
PCDHA3-202ENST00000532566 MRPL54Q6P161 138 aaKnown RBP12.96□□□□□ -0.33
PCDHA3-202ENST00000532566 LOC102723971A0A1B0GUV8 181 aa12.96□□□□□ -0.34
PCDHA3-202ENST00000532566 SS18L1O75177 396 aaPredicted RBP12.96□□□□□ -0.34
PCDHA3-202ENST00000532566 CEACAM1P13688 526 aa12.96□□□□□ -0.34
PCDHA3-202ENST00000532566 GFRA1P56159 465 aa12.96□□□□□ -0.34
PCDHA3-202ENST00000532566 GAMTQ14353 236 aa12.96□□□□□ -0.34
PCDHA3-202ENST00000532566 VKORC1L1Q8N0U8 176 aa12.96□□□□□ -0.34
PCDHA3-202ENST00000532566 OR13A1Q8NGR1 328 aa12.96□□□□□ -0.34
PCDHA3-202ENST00000532566 F2RL2O00254 374 aa12.95□□□□□ -0.34
PCDHA3-202ENST00000532566 PLPPR1Q8TBJ4 325 aa12.95□□□□□ -0.34
PCDHA3-202ENST00000532566 RCC1LQ96I51 464 aaKnown RBP12.95□□□□□ -0.34
PCDHA3-202ENST00000532566 M0QZ24 198 aa12.95□□□□□ -0.34
PCDHA3-202ENST00000532566 MDKP21741 143 aaPredicted RBP12.95□□□□□ -0.34
PCDHA3-202ENST00000532566 USF1P22415 310 aaPredicted RBP12.95□□□□□ -0.34
PCDHA3-202ENST00000532566 COL8A1P27658 744 aa12.95□□□□□ -0.34
PCDHA3-202ENST00000532566 IGHV3-21A0A0B4J1V1 117 aa12.95□□□□□ -0.34
PCDHA3-202ENST00000532566 SNURFLB1AK76 121 aa12.95□□□□□ -0.34
PCDHA3-202ENST00000532566 HYPMO75409 117 aa12.95□□□□□ -0.34
PCDHA3-202ENST00000532566 P01737 135 aa12.95□□□□□ -0.34
PCDHA3-202ENST00000532566 TMPRSS3P57727 454 aa12.95□□□□□ -0.34
PCDHA3-202ENST00000532566 HIST3H3Q16695 136 aa12.95□□□□□ -0.34
PCDHA3-202ENST00000532566 BIVMQ86UB2 503 aa12.95□□□□□ -0.34
PCDHA3-202ENST00000532566 OR8I2Q8N0Y5 310 aa12.95□□□□□ -0.34
PCDHA3-202ENST00000532566 OR1L6Q8NGR2 347 aa12.95□□□□□ -0.34
PCDHA3-202ENST00000532566 CXorf65A6NEN9 183 aa12.95□□□□□ -0.34
PCDHA3-202ENST00000532566 DLL1O00548 723 aa12.95□□□□□ -0.34
PCDHA3-202ENST00000532566 SLC25A17O43808 307 aa12.95□□□□□ -0.34
PCDHA3-202ENST00000532566 MIOXQ9UGB7 285 aa12.95□□□□□ -0.34
PCDHA3-202ENST00000532566 C5orf63A6NC05 138 aa12.94□□□□□ -0.34
PCDHA3-202ENST00000532566 F8VVB4 439 aa12.94□□□□□ -0.34
PCDHA3-202ENST00000532566 F8VWA3 439 aa12.94□□□□□ -0.34
PCDHA3-202ENST00000532566 TRGC2P03986 189 aa12.94□□□□□ -0.34
PCDHA3-202ENST00000532566 IER3P46695 156 aa12.94□□□□□ -0.34
PCDHA3-202ENST00000532566 HLA-DRB5Q30154 266 aa12.94□□□□□ -0.34
PCDHA3-202ENST00000532566 C18orf12Q96KH6 178 aa12.94□□□□□ -0.34
PCDHA3-202ENST00000532566 SRD5A3Q9H8P0 318 aa12.94□□□□□ -0.34
PCDHA3-202ENST00000532566 RNF115Q9Y4L5 304 aa12.94□□□□□ -0.34
PCDHA3-202ENST00000532566 C17orf98A8MV24 154 aa12.94□□□□□ -0.34
PCDHA3-202ENST00000532566 CORTO00230 105 aa12.94□□□□□ -0.34
PCDHA3-202ENST00000532566 SLC31A2O15432 143 aa12.94□□□□□ -0.34
PCDHA3-202ENST00000532566 Q0VFX4 171 aa12.94□□□□□ -0.34
PCDHA3-202ENST00000532566 RPL39P5Q59GN2 51 aa12.94□□□□□ -0.34
PCDHA3-202ENST00000532566 OR9G1Q8NH87 305 aa12.94□□□□□ -0.34
PCDHA3-202ENST00000532566 MMP7P09237 267 aaPredicted RBP12.94□□□□□ -0.34
PCDHA3-202ENST00000532566 HIST1H1EP10412 219 aaKnown RBP12.94□□□□□ -0.34
PCDHA3-202ENST00000532566 ZNF506Q5JVG8 444 aa12.94□□□□□ -0.34
PCDHA3-202ENST00000532566 QTRT1Q9BXR0 403 aaKnown RBP12.94□□□□□ -0.34
PCDHA3-202ENST00000532566 ELOVL5Q9NYP7 299 aa12.94□□□□□ -0.34
PCDHA3-202ENST00000532566 INTS1Q8N201 2190 aaKnown RBP12.94□□□□□ -0.34
PCDHA3-202ENST00000532566 TTC28Q96AY4 2481 aa12.94□□□□□ -0.34
PCDHA3-202ENST00000532566 TRAV24A0A0B4J272 114 aa12.93□□□□□ -0.34
PCDHA3-202ENST00000532566 SFTPCP11686 197 aa12.93□□□□□ -0.34
PCDHA3-202ENST00000532566 CD40P25942 277 aa12.93□□□□□ -0.34
PCDHA3-202ENST00000532566 TMEM183BQ1AE95 376 aa12.93□□□□□ -0.34
PCDHA3-202ENST00000532566 SSX7Q7RTT5 188 aa12.93□□□□□ -0.34
PCDHA3-202ENST00000532566 OR4C13Q8NGP0 309 aa12.93□□□□□ -0.34
PCDHA3-202ENST00000532566 HEATR1Q9H583 2144 aaKnown RBP12.93□□□□□ -0.34
PCDHA3-202ENST00000532566 PKDREJQ9NTG1 2253 aa12.93□□□□□ -0.34
PCDHA3-202ENST00000532566 BDP1A6H8Y1 2624 aa12.93□□□□□ -0.34
PCDHA3-202ENST00000532566 KIAA2026Q5HYC2 2103 aa12.93□□□□□ -0.34
PCDHA3-202ENST00000532566 OTX1P32242 354 aaPredicted RBP12.93□□□□□ -0.34
PCDHA3-202ENST00000532566 HCP5Q6MZN7 132 aa12.93□□□□□ -0.34
PCDHA3-202ENST00000532566 FAM222BQ8WU58 562 aa12.93□□□□□ -0.34
PCDHA3-202ENST00000532566 GUCD1Q96NT3 240 aa12.93□□□□□ -0.34
PCDHA3-202ENST00000532566 SPRR3Q9UBC9 169 aa12.93□□□□□ -0.34
PCDHA3-202ENST00000532566 HIST1H2BAQ96A08 127 aa12.93□□□□□ -0.34
PCDHA3-202ENST00000532566 IGKV1-27A0A075B6S5 117 aa12.93□□□□□ -0.34
PCDHA3-202ENST00000532566 SUPT4H1P63272 117 aaKnown RBP12.93□□□□□ -0.34
PCDHA3-202ENST00000532566 OR5AU1Q8NGC0 362 aa12.93□□□□□ -0.34
PCDHA3-202ENST00000532566 PRSS3P2Q8NHM4 247 aa12.93□□□□□ -0.34
PCDHA3-202ENST00000532566 TMEM186Q96B77 213 aa12.93□□□□□ -0.34
PCDHA3-202ENST00000532566 GRAMD2BQ96HH9 432 aa12.93□□□□□ -0.34
PCDHA3-202ENST00000532566 DCTN5Q9BTE1 182 aa12.93□□□□□ -0.34
PCDHA3-202ENST00000532566 ZNF430Q9H8G1 570 aaPredicted RBP12.93□□□□□ -0.34
PCDHA3-202ENST00000532566 TMEM250H0YL14 139 aa12.92□□□□□ -0.34
PCDHA3-202ENST00000532566 RND2P52198 227 aa12.92□□□□□ -0.34
PCDHA3-202ENST00000532566 QRFPP83859 136 aa12.92□□□□□ -0.34
PCDHA3-202ENST00000532566 LRRC75BQ2VPJ9 315 aa12.92□□□□□ -0.34
PCDHA3-202ENST00000532566 RNF144BQ7Z419 303 aa12.92□□□□□ -0.34
PCDHA3-202ENST00000532566 PCGF1Q9BSM1 259 aa12.92□□□□□ -0.34
PCDHA3-202ENST00000532566 ZNF146Q15072 292 aa12.92□□□□□ -0.34
PCDHA3-202ENST00000532566 ATRAIDQ6UW56 229 aa12.92□□□□□ -0.34
PCDHA3-202ENST00000532566 HIGD1AQ9Y241 93 aa12.92□□□□□ -0.34
PCDHA3-202ENST00000532566 SRP14P37108 136 aaKnown RBP12.92□□□□□ -0.34
PCDHA3-202ENST00000532566 FAM201AQ5SY85 155 aa12.92□□□□□ -0.34
PCDHA3-202ENST00000532566 LRTM2Q8N967 370 aa12.92□□□□□ -0.34
PCDHA3-202ENST00000532566 PARLQ9H300 379 aa12.92□□□□□ -0.34
PCDHA3-202ENST00000532566 METTL1Q9UBP6 276 aaKnown RBP12.92□□□□□ -0.34
PCDHA3-202ENST00000532566 FER1L5A0AVI2 2057 aa12.92□□□□□ -0.34
PCDHA3-202ENST00000532566 ARL14EPLP0DKL9 152 aa12.91□□□□□ -0.34
PCDHA3-202ENST00000532566 HIST1H1BP16401 226 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms