RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 PTHLHP12272 177 aa13.3□□□□□ -0.28
PHRF1-204ENST00000532550 AADACP22760 399 aa13.3□□□□□ -0.28
PHRF1-204ENST00000532550 CD69Q07108 199 aa13.3□□□□□ -0.28
PHRF1-204ENST00000532550 CDK10Q15131 360 aa13.3□□□□□ -0.28
PHRF1-204ENST00000532550 MRGPRG-AS1Q2M3A8 158 aa13.3□□□□□ -0.28
PHRF1-204ENST00000532550 OR2B11Q5JQS5 317 aa13.3□□□□□ -0.28
PHRF1-204ENST00000532550 ZNF66Q6ZN08 573 aa13.3□□□□□ -0.28
PHRF1-204ENST00000532550 OVCH2Q7RTZ1 564 aa13.3□□□□□ -0.28
PHRF1-204ENST00000532550 MFSD4AQ8N468 514 aa13.3□□□□□ -0.28
PHRF1-204ENST00000532550 SAMD12Q8N8I0 201 aa13.3□□□□□ -0.28
PHRF1-204ENST00000532550 SECTM1Q8WVN6 248 aa13.3□□□□□ -0.28
PHRF1-204ENST00000532550 PRR25Q96S07 402 aa13.3□□□□□ -0.28
PHRF1-204ENST00000532550 RANGRFQ9HD47 186 aaPredicted RBP13.3□□□□□ -0.28
PHRF1-204ENST00000532550 COA4Q9NYJ1 87 aa13.3□□□□□ -0.28
PHRF1-204ENST00000532550 TAS2R8Q9NYW2 309 aa13.3□□□□□ -0.28
PHRF1-204ENST00000532550 BRI3O95415 125 aa13.29□□□□□ -0.28
PHRF1-204ENST00000532550 SAA1P0DJI8 122 aaPredicted RBP13.29□□□□□ -0.28
PHRF1-204ENST00000532550 APELAP0DMC3 54 aa13.29□□□□□ -0.28
PHRF1-204ENST00000532550 MMD2Q8IY49 270 aa13.29□□□□□ -0.28
PHRF1-204ENST00000532550 OR5AP2Q8NGF4 316 aa13.29□□□□□ -0.28
PHRF1-204ENST00000532550 OR4S2Q8NH73 311 aa13.29□□□□□ -0.28
PHRF1-204ENST00000532550 SRSF12Q8WXF0 261 aaKnown RBP13.29□□□□□ -0.28
PHRF1-204ENST00000532550 TINAGL1Q9GZM7 467 aaPredicted RBP13.29□□□□□ -0.28
PHRF1-204ENST00000532550 ZNF430Q9H8G1 570 aaPredicted RBP13.29□□□□□ -0.28
PHRF1-204ENST00000532550 IFT46Q9NQC8 304 aa13.29□□□□□ -0.28
PHRF1-204ENST00000532550 CCL28Q9NRJ3 127 aa13.29□□□□□ -0.28
PHRF1-204ENST00000532550 ZNF256Q9Y2P7 627 aaPredicted RBP13.29□□□□□ -0.28
PHRF1-204ENST00000532550 MEIS3P1A6NDR6 274 aa13.28□□□□□ -0.28
PHRF1-204ENST00000532550 LY86O95711 162 aa13.28□□□□□ -0.28
PHRF1-204ENST00000532550 PPYP01298 95 aa13.28□□□□□ -0.28
PHRF1-204ENST00000532550 TMEM69Q5SWH9 247 aa13.28□□□□□ -0.28
PHRF1-204ENST00000532550 ZBTB34Q8NCN2 500 aa13.28□□□□□ -0.28
PHRF1-204ENST00000532550 OR13F1Q8NGS4 319 aa13.28□□□□□ -0.28
PHRF1-204ENST00000532550 VSTM2AQ8TAG5 236 aa13.28□□□□□ -0.28
PHRF1-204ENST00000532550 GIMAP1Q8WWP7 306 aa13.28□□□□□ -0.28
PHRF1-204ENST00000532550 SLC25A46Q96AG3 418 aa13.28□□□□□ -0.28
PHRF1-204ENST00000532550 KCTD12Q96CX2 325 aaKnown RBP13.28□□□□□ -0.28
PHRF1-204ENST00000532550 SPIN2AQ99865 258 aa13.28□□□□□ -0.28
PHRF1-204ENST00000532550 B9D2Q9BPU9 175 aa13.28□□□□□ -0.28
PHRF1-204ENST00000532550 SPIN2BQ9BPZ2 258 aa13.28□□□□□ -0.28
PHRF1-204ENST00000532550 FUNDC2Q9BWH2 189 aa13.28□□□□□ -0.28
PHRF1-204ENST00000532550 ANKRD34BA5PLL1 514 aa13.27□□□□□ -0.29
PHRF1-204ENST00000532550 TRIM64CA6NLI5 447 aa13.27□□□□□ -0.29
PHRF1-204ENST00000532550 TNFSF12O43508 249 aa13.27□□□□□ -0.29
PHRF1-204ENST00000532550 OR2A4O95047 310 aa13.27□□□□□ -0.29
PHRF1-204ENST00000532550 HRASP01112 189 aa13.27□□□□□ -0.29
PHRF1-204ENST00000532550 OR9G9P0C7N8 305 aa13.27□□□□□ -0.29
PHRF1-204ENST00000532550 ZP3P21754 424 aa13.27□□□□□ -0.29
PHRF1-204ENST00000532550 KIR2DS2P43631 304 aa13.27□□□□□ -0.29
PHRF1-204ENST00000532550 FXYD4P59646 89 aa13.27□□□□□ -0.29
PHRF1-204ENST00000532550 EIF4EBP1Q13541 118 aaPredicted RBP13.27□□□□□ -0.29
PHRF1-204ENST00000532550 MSMO1Q15800 293 aa13.27□□□□□ -0.29
PHRF1-204ENST00000532550 ACSM6Q6P461 480 aa13.27□□□□□ -0.29
PHRF1-204ENST00000532550 VKORC1L1Q8N0U8 176 aa13.27□□□□□ -0.29
PHRF1-204ENST00000532550 USMG5Q96IX5 58 aa13.27□□□□□ -0.29
PHRF1-204ENST00000532550 OR2A7Q96R45 310 aa13.27□□□□□ -0.29
PHRF1-204ENST00000532550 OR4C12Q96R67 309 aa13.27□□□□□ -0.29
PHRF1-204ENST00000532550 ELOVL1Q9BW60 279 aa13.27□□□□□ -0.29
PHRF1-204ENST00000532550 SLC5A7Q9GZV3 580 aa13.27□□□□□ -0.29
PHRF1-204ENST00000532550 LSM4Q9Y4Z0 139 aaKnown RBP13.27□□□□□ -0.29
PHRF1-204ENST00000532550 PRSS3P35030 304 aa13.26□□□□□ -0.29
PHRF1-204ENST00000532550 TAS2R20P59543 309 aa13.26□□□□□ -0.29
PHRF1-204ENST00000532550 VBP1P61758 197 aa13.26□□□□□ -0.29
PHRF1-204ENST00000532550 ADAD2Q8NCV1 583 aaKnown RBP13.26□□□□□ -0.29
PHRF1-204ENST00000532550 SNAPC3Q92966 411 aa13.26□□□□□ -0.29
PHRF1-204ENST00000532550 GPHA2Q96T91 129 aa13.26□□□□□ -0.29
PHRF1-204ENST00000532550 AIFM2Q9BRQ8 373 aa13.26□□□□□ -0.29
PHRF1-204ENST00000532550 COMMD3Q9UBI1 195 aa13.26□□□□□ -0.29
PHRF1-204ENST00000532550 SMIM31A0A1B0GVY4 71 aa13.25□□□□□ -0.29
PHRF1-204ENST00000532550 BRWD1-AS2P59051 145 aa13.25□□□□□ -0.29
PHRF1-204ENST00000532550 NCS1P62166 190 aa13.25□□□□□ -0.29
PHRF1-204ENST00000532550 CATR1Q13166 79 aa13.25□□□□□ -0.29
PHRF1-204ENST00000532550 VAX1Q5SQQ9 334 aa13.25□□□□□ -0.29
PHRF1-204ENST00000532550 OR6Q1Q8NGQ2 317 aa13.25□□□□□ -0.29
PHRF1-204ENST00000532550 EHFQ9NZC4 300 aa13.25□□□□□ -0.29
PHRF1-204ENST00000532550 PEF1Q9UBV8 284 aaKnown RBP13.25□□□□□ -0.29
PHRF1-204ENST00000532550 KBTBD11O94819 623 aa13.24□□□□□ -0.29
PHRF1-204ENST00000532550 MAS1LP35410 378 aa13.24□□□□□ -0.29
PHRF1-204ENST00000532550 HERV-K104P61576 105 aa13.24□□□□□ -0.29
PHRF1-204ENST00000532550 TATDN3Q17R31 274 aa13.24□□□□□ -0.29
PHRF1-204ENST00000532550 ZNF343Q6P1L6 599 aa13.24□□□□□ -0.29
PHRF1-204ENST00000532550 DHRS11Q6UWP2 260 aa13.24□□□□□ -0.29
PHRF1-204ENST00000532550 SSX9Q7RTT3 188 aa13.24□□□□□ -0.29
PHRF1-204ENST00000532550 SLC25A42Q86VD7 318 aa13.24□□□□□ -0.29
PHRF1-204ENST00000532550 TMEM17Q86X19 198 aa13.24□□□□□ -0.29
PHRF1-204ENST00000532550 SPAG16Q8N0X2 631 aa13.24□□□□□ -0.29
PHRF1-204ENST00000532550 PUSL1Q8N0Z8 303 aaKnown RBP13.24□□□□□ -0.29
PHRF1-204ENST00000532550 TTC9CQ8N5M4 171 aa13.24□□□□□ -0.29
PHRF1-204ENST00000532550 TMEM167AQ8TBQ9 72 aa13.24□□□□□ -0.29
PHRF1-204ENST00000532550 BORCS5Q969J3 196 aa13.24□□□□□ -0.29
PHRF1-204ENST00000532550 CMTM3Q96MX0 182 aa13.24□□□□□ -0.29
PHRF1-204ENST00000532550 SULT1C2O00338 296 aa13.23□□□□□ -0.29
PHRF1-204ENST00000532550 PMP2P02689 132 aa13.23□□□□□ -0.29
PHRF1-204ENST00000532550 RFX2P48378 723 aa13.23□□□□□ -0.29
PHRF1-204ENST00000532550 RORCP51449 518 aa13.23□□□□□ -0.29
PHRF1-204ENST00000532550 RHOGP84095 191 aa13.23□□□□□ -0.29
PHRF1-204ENST00000532550 DEFA5Q01523 94 aa13.23□□□□□ -0.29
PHRF1-204ENST00000532550 ATP5G2Q06055 141 aa13.23□□□□□ -0.29
PHRF1-204ENST00000532550 DYRK1AQ13627 763 aa13.23□□□□□ -0.29
PHRF1-204ENST00000532550 C10orf55Q5SWW7 151 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms