RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 TAS2R8Q9NYW2 309 aa17.84■□□□□ 0.45
CAPN1-222ENST00000532285 DNAH3Q8TD57 4116 aa17.83■□□□□ 0.45
CAPN1-222ENST00000532285 CREBL2O60519 120 aaPredicted RBP17.83■□□□□ 0.44
CAPN1-222ENST00000532285 HPGDSO60760 199 aa17.83■□□□□ 0.44
CAPN1-222ENST00000532285 ELK1P19419 428 aa17.83■□□□□ 0.44
CAPN1-222ENST00000532285 TAS2R46P59540 309 aa17.83■□□□□ 0.44
CAPN1-222ENST00000532285 FXYD4P59646 89 aa17.83■□□□□ 0.44
CAPN1-222ENST00000532285 ZNF616Q08AN1 781 aa17.83■□□□□ 0.44
CAPN1-222ENST00000532285 EGFEM1PQ0D2K5 195 aa17.83■□□□□ 0.44
CAPN1-222ENST00000532285 IDO2Q6ZQW0 420 aa17.83■□□□□ 0.44
CAPN1-222ENST00000532285 MS4A10Q96PG2 267 aa17.83■□□□□ 0.44
CAPN1-222ENST00000532285 EHFQ9NZC4 300 aa17.83■□□□□ 0.44
CAPN1-222ENST00000532285 H3BUA1 57 aa17.82■□□□□ 0.44
CAPN1-222ENST00000532285 OR8U8P0C7N1 319 aa17.82■□□□□ 0.44
CAPN1-222ENST00000532285 SAA1P0DJI8 122 aaPredicted RBP17.82■□□□□ 0.44
CAPN1-222ENST00000532285 ZNF182P17025 639 aaPredicted RBP17.82■□□□□ 0.44
CAPN1-222ENST00000532285 KIR2DS2P43631 304 aa17.82■□□□□ 0.44
CAPN1-222ENST00000532285 TPPP2P59282 170 aa17.82■□□□□ 0.44
CAPN1-222ENST00000532285 DYRK1AQ13627 763 aa17.82■□□□□ 0.44
CAPN1-222ENST00000532285 TNXAQ16473 311 aa17.82■□□□□ 0.44
CAPN1-222ENST00000532285 DHRS11Q6UWP2 260 aa17.82■□□□□ 0.44
CAPN1-222ENST00000532285 TRGV3P03979 118 aa17.81■□□□□ 0.44
CAPN1-222ENST00000532285 HOXD3P31249 432 aaPredicted RBP17.81■□□□□ 0.44
CAPN1-222ENST00000532285 RFX2P48378 723 aa17.81■□□□□ 0.44
CAPN1-222ENST00000532285 BRWD1-AS2P59051 145 aa17.81■□□□□ 0.44
CAPN1-222ENST00000532285 KRTAP10-11P60412 298 aa17.81■□□□□ 0.44
CAPN1-222ENST00000532285 HERV-K104P61576 105 aa17.81■□□□□ 0.44
CAPN1-222ENST00000532285 POC5Q8NA72 575 aa17.81■□□□□ 0.44
CAPN1-222ENST00000532285 OR5T1Q8NG75 326 aa17.81■□□□□ 0.44
CAPN1-222ENST00000532285 OR5H2Q8NGV7 314 aa17.81■□□□□ 0.44
CAPN1-222ENST00000532285 MRAPQ8TCY5 172 aa17.81■□□□□ 0.44
CAPN1-222ENST00000532285 GPX8Q8TED1 209 aa17.81■□□□□ 0.44
CAPN1-222ENST00000532285 BORCS5Q969J3 196 aa17.81■□□□□ 0.44
CAPN1-222ENST00000532285 GPHA2Q96T91 129 aa17.81■□□□□ 0.44
CAPN1-222ENST00000532285 PHB2Q99623 299 aa17.81■□□□□ 0.44
CAPN1-222ENST00000532285 ZNF430Q9H8G1 570 aaPredicted RBP17.81■□□□□ 0.44
CAPN1-222ENST00000532285 SCPEP1Q9HB40 452 aa17.81■□□□□ 0.44
CAPN1-222ENST00000532285 ZNF355PQ9NSJ1 428 aa17.81■□□□□ 0.44
CAPN1-222ENST00000532285 MSGN1A6NI15 193 aa17.8■□□□□ 0.44
CAPN1-222ENST00000532285 TNFSF12O43508 249 aa17.8■□□□□ 0.44
CAPN1-222ENST00000532285 ACTL6BO94805 426 aa17.8■□□□□ 0.44
CAPN1-222ENST00000532285 PMP2P02689 132 aa17.8■□□□□ 0.44
CAPN1-222ENST00000532285 LGALS1P09382 135 aaKnown RBP17.8■□□□□ 0.44
CAPN1-222ENST00000532285 TMEM17Q86X19 198 aa17.8■□□□□ 0.44
CAPN1-222ENST00000532285 MMD2Q8IY49 270 aa17.8■□□□□ 0.44
CAPN1-222ENST00000532285 VSTM2AQ8TAG5 236 aa17.8■□□□□ 0.44
CAPN1-222ENST00000532285 ZMAT5Q9UDW3 170 aaKnown RBP17.8■□□□□ 0.44
CAPN1-222ENST00000532285 FAM25AB3EWG3 89 aa17.79■□□□□ 0.44
CAPN1-222ENST00000532285 FAM25CB3EWG5 89 aa17.79■□□□□ 0.44
CAPN1-222ENST00000532285 FAM25GB3EWG6 89 aa17.79■□□□□ 0.44
CAPN1-222ENST00000532285 HRASP01112 189 aa17.79■□□□□ 0.44
CAPN1-222ENST00000532285 CATR1Q13166 79 aa17.79■□□□□ 0.44
CAPN1-222ENST00000532285 ASPHD1Q5U4P2 390 aa17.79■□□□□ 0.44
CAPN1-222ENST00000532285 ZNF818PQ6ZRF7 136 aa17.79■□□□□ 0.44
CAPN1-222ENST00000532285 SNX29P2Q8IUI4 249 aa17.79■□□□□ 0.44
CAPN1-222ENST00000532285 LYSMD2Q8IV50 215 aa17.79■□□□□ 0.44
CAPN1-222ENST00000532285 SRSF12Q8WXF0 261 aaKnown RBP17.79■□□□□ 0.44
CAPN1-222ENST00000532285 RHOVQ96L33 236 aa17.79■□□□□ 0.44
CAPN1-222ENST00000532285 AIFM2Q9BRQ8 373 aa17.79■□□□□ 0.44
CAPN1-222ENST00000532285 ZNF2Q9BSG1 426 aaPredicted RBP17.79■□□□□ 0.44
CAPN1-222ENST00000532285 ALX4Q9H161 411 aaPredicted RBP17.79■□□□□ 0.44
CAPN1-222ENST00000532285 LINC01619G3V211 115 aa17.78■□□□□ 0.44
CAPN1-222ENST00000532285 SULT1C2O00338 296 aa17.78■□□□□ 0.44
CAPN1-222ENST00000532285 OR2A4O95047 310 aa17.78■□□□□ 0.44
CAPN1-222ENST00000532285 BRI3O95415 125 aa17.78■□□□□ 0.44
CAPN1-222ENST00000532285 C9orf66Q5T8R8 295 aa17.78■□□□□ 0.44
CAPN1-222ENST00000532285 VKORC1L1Q8N0U8 176 aa17.78■□□□□ 0.44
CAPN1-222ENST00000532285 MOB3AQ96BX8 217 aa17.78■□□□□ 0.44
CAPN1-222ENST00000532285 OR2A7Q96R45 310 aa17.78■□□□□ 0.44
CAPN1-222ENST00000532285 ADAM30Q9UKF2 790 aa17.78■□□□□ 0.44
CAPN1-222ENST00000532285 A0A0G2JLM5 398 aa17.77■□□□□ 0.44
CAPN1-222ENST00000532285 SEC14L6B5MCN3 397 aa17.77■□□□□ 0.44
CAPN1-222ENST00000532285 RBFOX2O43251 390 aaKnown RBP eCLIP17.77■□□□□ 0.44
CAPN1-222ENST00000532285 KBTBD11O94819 623 aa17.77■□□□□ 0.44
CAPN1-222ENST00000532285 IGHV3-11P01762 117 aa17.77■□□□□ 0.44
CAPN1-222ENST00000532285 HLA-DMAP28067 261 aa17.77■□□□□ 0.44
CAPN1-222ENST00000532285 GNRHRP30968 328 aa17.77■□□□□ 0.44
CAPN1-222ENST00000532285 HRH1P35367 487 aa17.77■□□□□ 0.44
CAPN1-222ENST00000532285 SPAG16Q8N0X2 631 aa17.77■□□□□ 0.44
CAPN1-222ENST00000532285 PUSL1Q8N0Z8 303 aaKnown RBP17.77■□□□□ 0.44
CAPN1-222ENST00000532285 OR6F1Q8NGZ6 308 aa17.77■□□□□ 0.44
CAPN1-222ENST00000532285 SPIN2AQ99865 258 aa17.77■□□□□ 0.44
CAPN1-222ENST00000532285 SPIN2BQ9BPZ2 258 aa17.77■□□□□ 0.44
CAPN1-222ENST00000532285 C13orf42A0A1B0GVH6 325 aa17.76■□□□□ 0.43
CAPN1-222ENST00000532285 MPPED1O15442 326 aa17.76■□□□□ 0.43
CAPN1-222ENST00000532285 HSPB1P04792 205 aaKnown RBP17.76■□□□□ 0.43
CAPN1-222ENST00000532285 RCVRNP35243 200 aa17.76■□□□□ 0.43
CAPN1-222ENST00000532285 CLVS1Q8IUQ0 354 aaPredicted RBP17.76■□□□□ 0.43
CAPN1-222ENST00000532285 TMEM167AQ8TBQ9 72 aa17.76■□□□□ 0.43
CAPN1-222ENST00000532285 TINAGL1Q9GZM7 467 aaPredicted RBP17.76■□□□□ 0.43
CAPN1-222ENST00000532285 COA4Q9NYJ1 87 aa17.76■□□□□ 0.43
CAPN1-222ENST00000532285 RAMP3O60896 148 aa17.75■□□□□ 0.43
CAPN1-222ENST00000532285 OR9G9P0C7N8 305 aa17.75■□□□□ 0.43
CAPN1-222ENST00000532285 APELAP0DMC3 54 aa17.75■□□□□ 0.43
CAPN1-222ENST00000532285 MAS1LP35410 378 aa17.75■□□□□ 0.43
CAPN1-222ENST00000532285 SPCS2Q15005 226 aa17.75■□□□□ 0.43
CAPN1-222ENST00000532285 CD300LFQ8TDQ1 290 aa17.75■□□□□ 0.43
CAPN1-222ENST00000532285 RAB2BQ8WUD1 216 aa17.75■□□□□ 0.43
CAPN1-222ENST00000532285 DCUN1D4Q92564 292 aa17.75■□□□□ 0.43
CAPN1-222ENST00000532285 IGHV4OR15-8A0A075B7B6 117 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms