RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-222	ENST00000531967	BLVRB	P30043	206 aa	Predicted RBP	4.07	□□□□□ -1.76
ECHDC1-222	ENST00000531967	LINC00310	P59036	64 aa		4.07	□□□□□ -1.76
ECHDC1-222	ENST00000531967	PLP2	Q04941	152 aa		4.07	□□□□□ -1.76
ECHDC1-222	ENST00000531967	IL15RA	Q13261	267 aa		4.07	□□□□□ -1.76
ECHDC1-222	ENST00000531967	HERPUD1	Q15011	391 aa		4.07	□□□□□ -1.76
ECHDC1-222	ENST00000531967		Q6ZPA2	131 aa		4.07	□□□□□ -1.76
ECHDC1-222	ENST00000531967	DNM1P46	Q6ZS02	220 aa		4.07	□□□□□ -1.76
ECHDC1-222	ENST00000531967	ZNF664	Q8N3J9	261 aa		4.07	□□□□□ -1.76
ECHDC1-222	ENST00000531967	CT55	Q8WUE5	264 aa		4.07	□□□□□ -1.76
ECHDC1-222	ENST00000531967	GEMIN6	Q8WXD5	167 aa	Known RBP	4.07	□□□□□ -1.76
ECHDC1-222	ENST00000531967	LRRC61	Q9BV99	259 aa		4.07	□□□□□ -1.76
ECHDC1-222	ENST00000531967	C1QTNF6	Q9BXI9	259 aa		4.07	□□□□□ -1.76
ECHDC1-222	ENST00000531967	BAZ2B	Q9UIF8	2168 aa	Known RBP	4.07	□□□□□ -1.76
ECHDC1-222	ENST00000531967	COLCA2	A8K830	154 aa		4.07	□□□□□ -1.76
ECHDC1-222	ENST00000531967	PHOX2A	O14813	284 aa		4.07	□□□□□ -1.76
ECHDC1-222	ENST00000531967	KBTBD11	O94819	623 aa		4.07	□□□□□ -1.76
ECHDC1-222	ENST00000531967	NDUFC2	O95298	119 aa		4.07	□□□□□ -1.76
ECHDC1-222	ENST00000531967	TRBV12-3	P01733	135 aa		4.07	□□□□□ -1.76
ECHDC1-222	ENST00000531967	CSN2	P05814	226 aa		4.07	□□□□□ -1.76
ECHDC1-222	ENST00000531967	RPL34	P49207	117 aa	Known RBP	4.07	□□□□□ -1.76
ECHDC1-222	ENST00000531967	SELENOP	P49908	381 aa		4.07	□□□□□ -1.76
ECHDC1-222	ENST00000531967	SRPX	P78539	464 aa		4.07	□□□□□ -1.76
ECHDC1-222	ENST00000531967	FABP5	Q01469	135 aa		4.07	□□□□□ -1.76
ECHDC1-222	ENST00000531967	PAFAH1B3	Q15102	231 aa	Known RBP	4.07	□□□□□ -1.76
ECHDC1-222	ENST00000531967	LCN8	Q6JVE9	175 aa		4.07	□□□□□ -1.76
ECHDC1-222	ENST00000531967	FAAP20	Q6NZ36	180 aa		4.07	□□□□□ -1.76
ECHDC1-222	ENST00000531967	OR10D4P	Q8NGN7	298 aa		4.07	□□□□□ -1.76
ECHDC1-222	ENST00000531967	OR8S1	Q8NH09	359 aa		4.07	□□□□□ -1.76
ECHDC1-222	ENST00000531967	TMEM159	Q96B96	161 aa		4.07	□□□□□ -1.76
ECHDC1-222	ENST00000531967	MALSU1	Q96EH3	234 aa		4.07	□□□□□ -1.76
ECHDC1-222	ENST00000531967	SLC25A44	Q96H78	314 aa	Predicted RBP	4.07	□□□□□ -1.76
ECHDC1-222	ENST00000531967	GABARAPL3	Q9BY60	117 aa		4.07	□□□□□ -1.76
ECHDC1-222	ENST00000531967	POPDC3	Q9HBV1	291 aa		4.07	□□□□□ -1.76
ECHDC1-222	ENST00000531967	COL16A1	Q07092	1604 aa	Predicted RBP	4.06	□□□□□ -1.76
ECHDC1-222	ENST00000531967	IGHV1OR15-1	A0A075B7D0	117 aa		4.06	□□□□□ -1.76
ECHDC1-222	ENST00000531967	PGP	A6NDG6	321 aa		4.06	□□□□□ -1.76
ECHDC1-222	ENST00000531967	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	4.06	□□□□□ -1.76
ECHDC1-222	ENST00000531967	RPL36A-HNRNPH2	H7BZ11	118 aa		4.06	□□□□□ -1.76
ECHDC1-222	ENST00000531967	MT-ND4L	P03901	98 aa		4.06	□□□□□ -1.76
ECHDC1-222	ENST00000531967	NMB	P08949	121 aa		4.06	□□□□□ -1.76
ECHDC1-222	ENST00000531967	RGN	Q15493	299 aa		4.06	□□□□□ -1.76
ECHDC1-222	ENST00000531967	KIAA1644	Q3SXP7	199 aa		4.06	□□□□□ -1.76
ECHDC1-222	ENST00000531967	FAM222A	Q5U5X8	452 aa		4.06	□□□□□ -1.76
ECHDC1-222	ENST00000531967	KLK6	Q92876	244 aa		4.06	□□□□□ -1.76
ECHDC1-222	ENST00000531967	FXYD5	Q96DB9	178 aa		4.06	□□□□□ -1.76
ECHDC1-222	ENST00000531967	TMEM101	Q96IK0	257 aa		4.06	□□□□□ -1.76
ECHDC1-222	ENST00000531967	TMEM147	Q9BVK8	224 aa		4.06	□□□□□ -1.76
ECHDC1-222	ENST00000531967	OR52D1	Q9H346	318 aa		4.06	□□□□□ -1.76
ECHDC1-222	ENST00000531967	NOX3	Q9HBY0	568 aa		4.06	□□□□□ -1.76
ECHDC1-222	ENST00000531967	RBM12B-AS1	Q9P1G2	102 aa		4.06	□□□□□ -1.76
ECHDC1-222	ENST00000531967	ADAMTS20	P59510	1910 aa		4.06	□□□□□ -1.76
ECHDC1-222	ENST00000531967	AHDC1	Q5TGY3	1603 aa	Predicted RBP	4.06	□□□□□ -1.76
ECHDC1-222	ENST00000531967	SMIM26	A0A096LP01	95 aa		4.06	□□□□□ -1.76
ECHDC1-222	ENST00000531967		M0R233	179 aa		4.06	□□□□□ -1.76
ECHDC1-222	ENST00000531967	PSPHP1	O15172	72 aa		4.06	□□□□□ -1.76
ECHDC1-222	ENST00000531967	DUS4L	O95620	317 aa	Known RBP	4.06	□□□□□ -1.76
ECHDC1-222	ENST00000531967	AZU1	P20160	251 aa		4.06	□□□□□ -1.76
ECHDC1-222	ENST00000531967	CCL1	P22362	96 aa		4.06	□□□□□ -1.76
ECHDC1-222	ENST00000531967	TNFAIP6	P98066	277 aa	Predicted RBP	4.06	□□□□□ -1.76
ECHDC1-222	ENST00000531967	MEF2C	Q06413	473 aa	Predicted RBP	4.06	□□□□□ -1.76
ECHDC1-222	ENST00000531967	PLCXD2	Q0VAA5	305 aa		4.06	□□□□□ -1.76
ECHDC1-222	ENST00000531967	RUNX3	Q13761	415 aa		4.06	□□□□□ -1.76
ECHDC1-222	ENST00000531967	ARFRP1	Q13795	201 aa		4.06	□□□□□ -1.76
ECHDC1-222	ENST00000531967	ZNF404	Q494X3	552 aa		4.06	□□□□□ -1.76
ECHDC1-222	ENST00000531967	CCSMST1	Q4G0I0	132 aa		4.06	□□□□□ -1.76
ECHDC1-222	ENST00000531967	CXCL17	Q6UXB2	119 aa		4.06	□□□□□ -1.76
ECHDC1-222	ENST00000531967	LINC00173	Q6ZV60	143 aa		4.06	□□□□□ -1.76
ECHDC1-222	ENST00000531967	TRPT1	Q86TN4	253 aa	Known RBP	4.06	□□□□□ -1.76
ECHDC1-222	ENST00000531967	OR1L1	Q8NH94	360 aa		4.06	□□□□□ -1.76
ECHDC1-222	ENST00000531967	DCUN1D4	Q92564	292 aa		4.06	□□□□□ -1.76
ECHDC1-222	ENST00000531967	PLEKHB2	Q96CS7	222 aa		4.06	□□□□□ -1.76
ECHDC1-222	ENST00000531967	PRAC1	Q96KF2	57 aa		4.06	□□□□□ -1.76
ECHDC1-222	ENST00000531967	GPR82	Q96P67	336 aa		4.06	□□□□□ -1.76
ECHDC1-222	ENST00000531967	GINS4	Q9BRT9	223 aa		4.06	□□□□□ -1.76
ECHDC1-222	ENST00000531967	TMEM70	Q9BUB7	260 aa		4.06	□□□□□ -1.76
ECHDC1-222	ENST00000531967	C19orf24	Q9BVV8	132 aa		4.06	□□□□□ -1.76
ECHDC1-222	ENST00000531967	CHST6	Q9GZX3	395 aa		4.06	□□□□□ -1.76
ECHDC1-222	ENST00000531967	DEFB127	Q9H1M4	99 aa		4.06	□□□□□ -1.76
ECHDC1-222	ENST00000531967	ZNF331	Q9NQX6	463 aa	Predicted RBP	4.06	□□□□□ -1.76
ECHDC1-222	ENST00000531967	SMCO4	Q9NRQ5	59 aa		4.06	□□□□□ -1.76
ECHDC1-222	ENST00000531967	TNFSF18	Q9UNG2	199 aa		4.06	□□□□□ -1.76
ECHDC1-222	ENST00000531967	SLC25A15	Q9Y619	301 aa		4.06	□□□□□ -1.76
ECHDC1-222	ENST00000531967	GREB1L	Q9C091	1923 aa	Predicted RBP	4.05	□□□□□ -1.76
ECHDC1-222	ENST00000531967	TRAV8-3	A0A0A6YYJ7	113 aa		4.05	□□□□□ -1.76
ECHDC1-222	ENST00000531967	DNAJC9-AS1	A6NH13	148 aa		4.05	□□□□□ -1.76
ECHDC1-222	ENST00000531967	OR2T1	O43869	369 aa		4.05	□□□□□ -1.76
ECHDC1-222	ENST00000531967	MPC2	O95563	127 aa		4.05	□□□□□ -1.76
ECHDC1-222	ENST00000531967	NPY1R	P25929	384 aa		4.05	□□□□□ -1.76
ECHDC1-222	ENST00000531967	NCBP2	P52298	156 aa	Known RBP eCLIP	4.05	□□□□□ -1.76
ECHDC1-222	ENST00000531967	GFER	P55789	205 aa		4.05	□□□□□ -1.76
ECHDC1-222	ENST00000531967	UBE2S	Q16763	222 aa		4.05	□□□□□ -1.76
ECHDC1-222	ENST00000531967	TMEM241	Q24JQ0	296 aa		4.05	□□□□□ -1.76
ECHDC1-222	ENST00000531967	C6orf99	Q4VX62	202 aa		4.05	□□□□□ -1.76
ECHDC1-222	ENST00000531967	ZNF773	Q6PK81	442 aa		4.05	□□□□□ -1.76
ECHDC1-222	ENST00000531967	ARL9	Q6T311	187 aa		4.05	□□□□□ -1.76
ECHDC1-222	ENST00000531967		Q6ZRU5	148 aa		4.05	□□□□□ -1.76
ECHDC1-222	ENST00000531967	ZNF615	Q8N8J6	731 aa		4.05	□□□□□ -1.76
ECHDC1-222	ENST00000531967	OR4S1	Q8NGB4	309 aa		4.05	□□□□□ -1.76
ECHDC1-222	ENST00000531967	TAF15	Q92804	592 aa	Known RBP eCLIP	4.05	□□□□□ -1.76
ECHDC1-222	ENST00000531967	SLC35E1	Q96K37	410 aa		4.05	□□□□□ -1.76

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