RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 ZNF251Q9BRH9 671 aa13.35□□□□□ -0.27
PKP3-208ENST00000531857 C20orf85Q9H1P6 137 aa13.35□□□□□ -0.27
PKP3-208ENST00000531857 EDA2RQ9HAV5 297 aa13.35□□□□□ -0.27
PKP3-208ENST00000531857 SLC2A8Q9NY64 477 aa13.35□□□□□ -0.27
PKP3-208ENST00000531857 STARD9Q9P2P6 4700 aa13.34□□□□□ -0.27
PKP3-208ENST00000531857 FAM90A7PA6NKC0 464 aa13.34□□□□□ -0.27
PKP3-208ENST00000531857 FAM90A23PA8MXZ1 464 aa13.34□□□□□ -0.27
PKP3-208ENST00000531857 NBR2O15453 112 aa13.34□□□□□ -0.27
PKP3-208ENST00000531857 CRTAPO75718 401 aaPredicted RBP13.34□□□□□ -0.27
PKP3-208ENST00000531857 RAB3DO95716 219 aa13.34□□□□□ -0.27
PKP3-208ENST00000531857 HIST1H1DP16402 221 aaKnown RBP13.34□□□□□ -0.27
PKP3-208ENST00000531857 GNG2P59768 71 aa13.34□□□□□ -0.27
PKP3-208ENST00000531857 NDPQ00604 133 aa13.34□□□□□ -0.27
PKP3-208ENST00000531857 C5orf64Q2M2E5 130 aa13.34□□□□□ -0.27
PKP3-208ENST00000531857 TMEM30BQ3MIR4 351 aa13.34□□□□□ -0.27
PKP3-208ENST00000531857 C6orf183Q5T699 404 aa13.34□□□□□ -0.27
PKP3-208ENST00000531857 LIN54Q6MZP7 749 aa13.34□□□□□ -0.27
PKP3-208ENST00000531857 ADAMTSL5Q6ZMM2 481 aa13.34□□□□□ -0.27
PKP3-208ENST00000531857 HAPLN4Q86UW8 402 aa13.34□□□□□ -0.27
PKP3-208ENST00000531857 GAPTQ8N292 157 aa13.34□□□□□ -0.27
PKP3-208ENST00000531857 OR52L2PQ8NGH6 319 aa13.34□□□□□ -0.27
PKP3-208ENST00000531857 SCGB3A2Q96PL1 93 aa13.34□□□□□ -0.27
PKP3-208ENST00000531857 NABP2Q9BQ15 211 aa13.34□□□□□ -0.27
PKP3-208ENST00000531857 GHITMQ9H3K2 345 aa13.34□□□□□ -0.27
PKP3-208ENST00000531857 IFT46Q9NQC8 304 aa13.34□□□□□ -0.27
PKP3-208ENST00000531857 OR2S2Q9NQN1 319 aa13.34□□□□□ -0.27
PKP3-208ENST00000531857 HSF4Q9ULV5 492 aa13.34□□□□□ -0.27
PKP3-208ENST00000531857 A0A1W2PN81 502 aa13.33□□□□□ -0.28
PKP3-208ENST00000531857 BOLA2-SMG1P6H3BVE0 249 aa13.33□□□□□ -0.28
PKP3-208ENST00000531857 LGALS1P09382 135 aaKnown RBP13.33□□□□□ -0.28
PKP3-208ENST00000531857 MGMTP16455 207 aa13.33□□□□□ -0.28
PKP3-208ENST00000531857 NAT1P18440 290 aa13.33□□□□□ -0.28
PKP3-208ENST00000531857 CHRNA7P36544 502 aa13.33□□□□□ -0.28
PKP3-208ENST00000531857 OR3A3P47888 321 aa13.33□□□□□ -0.28
PKP3-208ENST00000531857 VEGFCP49767 419 aa13.33□□□□□ -0.28
PKP3-208ENST00000531857 CDK10Q15131 360 aa13.33□□□□□ -0.28
PKP3-208ENST00000531857 ECSCRQ19T08 205 aa13.33□□□□□ -0.28
PKP3-208ENST00000531857 RNASE12Q5GAN4 147 aaKnown RBP13.33□□□□□ -0.28
PKP3-208ENST00000531857 Q8N1Y9 231 aa13.33□□□□□ -0.28
PKP3-208ENST00000531857 ABHD14AQ9BUJ0 271 aa13.33□□□□□ -0.28
PKP3-208ENST00000531857 TAF9BQ9HBM6 251 aa13.33□□□□□ -0.28
PKP3-208ENST00000531857 SPACA1Q9HBV2 294 aa13.33□□□□□ -0.28
PKP3-208ENST00000531857 RAB9BQ9NP90 201 aa13.33□□□□□ -0.28
PKP3-208ENST00000531857 ANAPC10Q9UM13 185 aa13.33□□□□□ -0.28
PKP3-208ENST00000531857 IGHV4-30-4P0DP06 118 aa13.32□□□□□ -0.28
PKP3-208ENST00000531857 PPP1CCP36873 323 aaKnown RBP13.32□□□□□ -0.28
PKP3-208ENST00000531857 PLA2G7Q13093 441 aa13.32□□□□□ -0.28
PKP3-208ENST00000531857 ZFP69Q49AA0 526 aa13.32□□□□□ -0.28
PKP3-208ENST00000531857 RNASE10Q5GAN6 216 aaKnown RBP13.32□□□□□ -0.28
PKP3-208ENST00000531857 NPBQ8NG41 125 aa13.32□□□□□ -0.28
PKP3-208ENST00000531857 OR4C16Q8NGL9 310 aa13.32□□□□□ -0.28
PKP3-208ENST00000531857 ST6GAL2Q96JF0 529 aa13.32□□□□□ -0.28
PKP3-208ENST00000531857 SELENOIQ9C0D9 397 aa13.32□□□□□ -0.28
PKP3-208ENST00000531857 TRAV6A0A075B6T7 132 aa13.31□□□□□ -0.28
PKP3-208ENST00000531857 UBE2QL1A1L167 161 aa13.31□□□□□ -0.28
PKP3-208ENST00000531857 NDUFA3O95167 84 aa13.31□□□□□ -0.28
PKP3-208ENST00000531857 IGHV3-11P01762 117 aa13.31□□□□□ -0.28
PKP3-208ENST00000531857 OR8U9P0C7N5 309 aa13.31□□□□□ -0.28
PKP3-208ENST00000531857 EGR2P11161 476 aaPredicted RBP13.31□□□□□ -0.28
PKP3-208ENST00000531857 CCR6P51684 374 aa13.31□□□□□ -0.28
PKP3-208ENST00000531857 TAS2R46P59540 309 aa13.31□□□□□ -0.28
PKP3-208ENST00000531857 OR10K2Q6IF99 312 aa13.31□□□□□ -0.28
PKP3-208ENST00000531857 TRAT1Q6PIZ9 186 aa13.31□□□□□ -0.28
PKP3-208ENST00000531857 ZNF833PQ6ZTB9 187 aa13.31□□□□□ -0.28
PKP3-208ENST00000531857 TMEM17Q86X19 198 aa13.31□□□□□ -0.28
PKP3-208ENST00000531857 ARRDC1Q8N5I2 433 aa13.31□□□□□ -0.28
PKP3-208ENST00000531857 BANF2Q9H503 90 aa13.31□□□□□ -0.28
PKP3-208ENST00000531857 MBNL3Q9NUK0 354 aaKnown RBP13.31□□□□□ -0.28
PKP3-208ENST00000531857 C19orf73Q9NVV2 129 aa13.31□□□□□ -0.28
PKP3-208ENST00000531857 FOXA2Q9Y261 457 aaPredicted RBP13.31□□□□□ -0.28
PKP3-208ENST00000531857 TNCP24821 2201 aa13.3□□□□□ -0.28
PKP3-208ENST00000531857 SAA2-SAA4A0A096LPE2 208 aa13.3□□□□□ -0.28
PKP3-208ENST00000531857 A0A0B4J293 547 aa13.3□□□□□ -0.28
PKP3-208ENST00000531857 TMEM235A6NFC5 223 aa13.3□□□□□ -0.28
PKP3-208ENST00000531857 MFNGO00587 321 aa13.3□□□□□ -0.28
PKP3-208ENST00000531857 CREBL2O60519 120 aaPredicted RBP13.3□□□□□ -0.28
PKP3-208ENST00000531857 IFNA6P05013 189 aa13.3□□□□□ -0.28
PKP3-208ENST00000531857 SAA2P0DJI9 122 aaPredicted RBP13.3□□□□□ -0.28
PKP3-208ENST00000531857 CRIP2P52943 208 aaPredicted RBP13.3□□□□□ -0.28
PKP3-208ENST00000531857 CX3CL1P78423 397 aa13.3□□□□□ -0.28
PKP3-208ENST00000531857 SIGIRRQ6IA17 410 aa13.3□□□□□ -0.28
PKP3-208ENST00000531857 GLDNQ6ZMI3 551 aaPredicted RBP13.3□□□□□ -0.28
PKP3-208ENST00000531857 Q96M66 194 aa13.3□□□□□ -0.28
PKP3-208ENST00000531857 OR4C12Q96R67 309 aa13.3□□□□□ -0.28
PKP3-208ENST00000531857 FBXL15Q9H469 300 aa13.3□□□□□ -0.28
PKP3-208ENST00000531857 KIAA1456Q9P272 454 aa13.3□□□□□ -0.28
PKP3-208ENST00000531857 FOXI3A8MTJ6 420 aaPredicted RBP13.29□□□□□ -0.28
PKP3-208ENST00000531857 FCN1O00602 326 aa13.29□□□□□ -0.28
PKP3-208ENST00000531857 C1QBP02746 253 aa13.29□□□□□ -0.28
PKP3-208ENST00000531857 CD3DP04234 171 aa13.29□□□□□ -0.28
PKP3-208ENST00000531857 HSPB1P04792 205 aaKnown RBP13.29□□□□□ -0.28
PKP3-208ENST00000531857 ANXA3P12429 323 aa13.29□□□□□ -0.28
PKP3-208ENST00000531857 UBE2MP61081 183 aaKnown RBP13.29□□□□□ -0.28
PKP3-208ENST00000531857 MRPS15P82914 257 aaKnown RBP13.29□□□□□ -0.28
PKP3-208ENST00000531857 ARFRP1Q13795 201 aa13.29□□□□□ -0.28
PKP3-208ENST00000531857 ZNF660Q6AZW8 331 aaPredicted RBP13.29□□□□□ -0.28
PKP3-208ENST00000531857 MRPL30Q8TCC3 161 aaKnown RBP13.29□□□□□ -0.28
PKP3-208ENST00000531857 GIMAP1Q8WWP7 306 aa13.29□□□□□ -0.28
PKP3-208ENST00000531857 SNAPC3Q92966 411 aa13.29□□□□□ -0.28
PKP3-208ENST00000531857 MS4A10Q96PG2 267 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms